Nucleotide Global Alignment
Description
- Query:
- TRCN0000480078
- Subject:
- XR_928308.1
- Aligned Length:
- 2575
- Identities:
- 1513
- Gaps:
- 1037
Alignment
Query 1 ---------------------------------------ATGTCATACGGATCCATCGCCCGTGGAGGTGGCCT 35
|||||||||||||||||||||||||||||||||||
Sbjct 1 CTCAGTGTGGAGGCTGCTGGCCCTGCCATCTGTAAGAAGATGTCATACGGATCCATCGCCCGTGGAGGTGGCCT 74
Query 36 GGGGAGCCGTGGCCCTTTCGGGGGACCTTCGAGACAAGGCTGTCAGCCCCTAGAGTGCGCTAGATGTTGGACCG 109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GGGGAGCCGTGGCCCTTTCGGGGGACCTTCGAGACAAGGCTGTCAGCCCCTAGAGTGCGCTAGATGTTGGACCG 148
Query 110 AGTATGGAATCCGCCATTTCCCCTGCCCGTCGCCAGAGAGCAAGCTGCAGAACCGCTGTGTGGGGAAGGACGGG 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AGTATGGAATCCGCCATTTCCCCTGCCCGTCGCCAGAGAGCAAGCTGCAGAACCGCTGTGTGGGGAAGGACGGG 222
Query 184 GAAGGTGATCTGGGGCCAGCAGGCACGCCTATTGTCCCAAGGGCCAGGAAGCGAGGGCCTGGGGTTGCCCCTGA 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GAAGGTGATCTGGGGCCAGCAGGCACGCCTATTGTCCCAAGGGCCAGGAAGCGAGGGCCTGGGGTTGCCCCTGA 296
Query 258 AGGCAGCCGGATGCCGGAGCCCACCTCATCACCCACCATTGGCCCGAGGAAGGACTCGGCTGCTGGGCCCCATG 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AGGCAGCCGGATGCCGGAGCCCACCTCATCACCCACCATTGGCCCGAGGAAGGACTCGGCTGCTGGGCCCCATG 370
Query 332 GCCGGATGGCGGGGCCCAGCACTACCCGGGCCAAGAAGAGGAAGCCCAACTTCTGCCCGCAGGAGACCGAGGTG 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GCCGGATGGCGGGGCCCAGCACTACCCGGGCCAAGAAGAGGAAGCCCAACTTCTGCCCGCAGGAGACCGAGGTG 444
Query 406 CTGGTGTCCAAGGTGAGCAAGCACCACCAGCTGCTGTTTGGCACGGGGCTGCTGAAGGCCGAGCCCACTCGCAG 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CTGGTGTCCAAGGTGAGCAAGCACCACCAGCTGCTGTTTGGCACGGGGCTGCTGAAGGCCGAGCCCACTCGCAG 518
Query 480 GTACCGCGTGTGGAGCCGCATCCTGCAGGCCGTGAATGCGCTGGGCTACTGTCGCCGCGACGTTGTGGACCTGA 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GTACCGCGTGTGGAGCCGCATCCTGCAGGCCGTGAATGCGCTGGGCTACTGTCGCCGCGACGTTGTGGACCTGA 592
Query 554 AGCACAAGTGGCGGGACCTACGAGCCGTCGTGCGGCGCAAGCTGGGCGACCTCCGGAAGGCGGCCCATGGCCCC 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AGCACAAGTGGCGGGACCTACGAGCCGTCGTGCGGCGCAAGCTGGGCGACCTCCGGAAGGCGGCCCATGGCCCC 666
Query 628 AGCCCTGGTTCCGGCAAGCCCCAGGCCCTGGCTCTCACGCCCGTGGAGCAGGTGGTGGCCAAGACCTTCTCTTG 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AGCCCTGGTTCCGGCAAGCCCCAGGCCCTGGCTCTCACGCCCGTGGAGCAGGTGGTGGCCAAGACCTTCTCTTG 740
Query 702 CCAGGCCCTGCCCTCCGAGGGCTTCAGTCTGGAGCCGCCCAGAGCCACCCAGGTCGATCCGTGCAACCTCCAGG 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CCAGGCCCTGCCCTCCGAGGGCTTCAGTCTGGAGCCGCCCAGAGCCACCCAGGTCGATCCGTGCAACCTCCAGG 814
Query 776 AGCTGTTCCAGGAGATGTCGGCCAACGTCTTCCGAATCAACTCCAGTGTGACCTCCTTGGAGCGGAGCCTTCAG 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGCTGTTCCAGGAGATGTCGGCCAACGTCTTCCGAATCAACTCCAGTGTGACCTCCTTGGAGCGGAGCCTTCAG 888
Query 850 TCCTTAGGGACACCGAGTGACACGCAGGAGCTTCGGGACAGCCTGCACACGGCACAGCAGGAGACCAACAAGAC 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TCCTTAGGGACACCGAGTGACACGCAGGAGCTTCGGGACAGCCTGCACACGGCACAGCAGGAGACCAACAAGAC 962
Query 924 CATTGCAGCCAGCGCCAGCTCCGTGAAGCAGATGGCCGAGCTGCTGCGCAGCTCCTGCCCGCAGGAGCGTCTGC 997
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CATTGCAGCCAGCGCCAGCTCCGTGAAGCAGATGGCCGAGCTGCTGCGCAGCTCCTGCCCGCAGGAGCGTCTGC 1036
Query 998 AGCAGGAGCGTCCTCAGCTGGACCGGCTGAAAACCCAGCTCTCAGATGCCATTCAGTGCTATGGAGTGGTGCAG 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AGCAGGAGCGTCCTCAGCTGGACCGGCTGAAAACCCAGCTCTCAGATGCCATTCAGTGCTATGGAGTGGTGCAG 1110
Query 1072 AAGAAAATTGCAGAAAAGTCCAGAGCGCTGCTTCCCATGGCGCAGAGGGGCAGTAAACAGCAGAGTCCCCAGGC 1145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AAGAAAATTGCAGAAAAGTCCAGAGCGCTGCTTCCCATGGCGCAGAGGGGCAGTAAACAGCAGAGTCCCCAGGC 1184
Query 1146 CCCGTTTGCCGAGCTGGCTGATGATGAGAAGGTCTTTAACGGGAGTGACAACATGTGGCAGGGCCAGGAGCAGG 1219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CCCGTTTGCCGAGCTGGCTGATGATGAGAAGGTCTTTAACGGGAGTGACAACATGTGGCAGGGCCAGGAGCAGG 1258
Query 1220 CGCTGCTCCCGGACATCACTGAAGAGGACCTGGAGGCCATCCGGCTGCGGGAGGAGGCCATCCTGCAGATGGAG 1293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CGCTGCTCCCGGACATCACTGAAGAGGACCTGGAGGCCATCCGGCTGCGGGAGGAGGCCATCCTGCAGATGGAG 1332
Query 1294 AGCAACTTGCTGGATGTGAATCAGATCATCAAGGACTTGGCCTCCATGGTGTCAGAGCAAGGAGAAGCTGTTG- 1366
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 AGCAACTTGCTGGATGTGAATCAGATCATCAAGGACTTGGCCTCCATGGTGTCAGAGCAAGGAGAAGCTGTTGG 1406
Query 1367 -------------------------------------------------------------------------- 1366
Sbjct 1407 GTCCAGCAGCAGCAAAGCCATCTGCCAGCAGAGCTGCAGCCCCGAGCCGGCCGCGGCAGCCCTGCTGCTGGGTG 1480
Query 1367 -------------------------------------------------------------------------- 1366
Sbjct 1481 CCGGGCCGGGCTCCACACCCCTGCGGCCGGGCCCCCACTCCCGCACCAAGACACGCAAGCCCAACTTCAGCCCC 1554
Query 1367 -------------------------------------------------------------------------- 1366
Sbjct 1555 CAGGAGACGGAGGTGCTGGTGCAGAGGGTGCGGCGCCACTACCCGCTGCTGTTCGGGGCGCTGCGGGGCACACC 1628
Query 1367 -------------------------------------------------------------------------- 1366
Sbjct 1629 TGCCCGAAAGCACCGCGTGTGGAGCCGCATCCTGCAGGCAGTGAACGCGCTGGGCTACTGCCGCCGCGACCTGG 1702
Query 1367 -------------------------------------------------------------------------- 1366
Sbjct 1703 GGGACCTCAAGCACAAGTGGCGGGACCTGCGAGGTGCTGTGCGCAAGAAGCTGGCGGAGGGCGGCCCCGCCCCC 1776
Query 1367 -------------------------------------------------------------------------- 1366
Sbjct 1777 GGCCTCCTCCTCACACCTGTGGAGCGCATGGTGGCAGAGACCTTTTCTGCCCACGGTCCCCAAGGCGAGGGCCA 1850
Query 1367 --------------------ATAGTATTGAAGCCAGCCTTGAGGCTGCGTCCTCGCATGCGGAGGCAGCCCGCC 1420
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 GACCACGGAGCCCCTGCCAAATAGTATTGAAGCCAGCCTTGAGGCTGCGTCCTCGCATGCGGAGGCAGCCCGCC 1924
Query 1421 AGCTCCTGGCTGGAGCCAGCCGGCACCAACT--------CCA------GAGACA-------------------- 1460
||||||||||||||||||||||||||||||| ||| ||||||
Sbjct 1925 AGCTCCTGGCTGGAGCCAGCCGGCACCAACTGGTGAACGCCAGGCCGGGAGACAAGACCTGGGAGAGGCTGTGC 1998
Query 1461 CAAGATCAAGTGCTGCTTCCTATCAG-----------------------CTGGAGTCA---CTGCCCTGCTTGT 1508
||||.|||..|||.|..|....|||| ||||.|.|| |||..|||.|||.
Sbjct 1999 CAAGGTCACCTGCAGGATGAGGTCAGAGGCAAGGCTGGGGCTGGGTCTCCTGGCGCCAGCTCTGGGCTGTTTGG 2072
Query 1509 CATCATCATCATCATCGC----CACCTCT-GTCCGAAAG----------------------------------- 1542
|.|||.| .|.|.|| ||||||| |||....||
Sbjct 2073 CCTCAGC----CCTTGGCCCAGCACCTCTAGTCGCTGAGGGCAGCTAGGCCCAGGGGCCTCCAGGAGGCAGAAG 2142
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 2143 GTGATGGGCAGAAGGTGACGCCTGGTGACGGGCAAGGTGGACTCGCTGGAAACTCAGGGCCACACCACGCAGAA 2216
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 2217 GGCCTTGTTTCAAGAGGAAAGCCAGCCAGCAAGATGACCCCTCCTGAGCACCCTGGGATCACCTGGTCAGAAGC 2290
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 2291 AGCGCTGATGCCTGGGACGGCAGGAGGACGATGGGACAGTGAGGAAGAGGAGGAGGTGAAGGAGGAGGAGGAAA 2364
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 2365 GGAGGGCAGTGGCAACTGGGCCAGCCACCTGTGCCATGGACGCCGTGCCGCATTCCCAGTGAGCCTGTGGGCTC 2438
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 2439 AGTCCTGGCAGAGCAGGCACCGCCCCCCCGACACACTGCAGAGGAGCTGATGAGGAGGACGAGACCCCCAGCTG 2512
Query 1543 ----------------------------------------------------------- 1542
Sbjct 2513 CTTGTGGCTGCCCCTGAGGTCCCTGGAAGGGCCCAGCCTGCCTGAACCTGACCCCCTGG 2571