Nucleotide Global Alignment

Description

Query:
TRCN0000480128
Subject:
NM_020580.3
Aligned Length:
1773
Identities:
1549
Gaps:
3

Alignment

Query    1  ATGGCGGGGGCCGTGCCGGGCGCCATCATGGACGAGGACTACTACGGGAGCGCGGCCGAGTGGGGCGACGAGGC  74
            ||||||||..|.|.||||||..|.||.||||..||.|||||||.|||||..||..|.|||||||||||.|||||
Sbjct    1  ATGGCGGGTCCGGCGCCGGGTACAATTATGGGAGAAGACTACTTCGGGAATGCCTCAGAGTGGGGCGAAGAGGC  74

Query   75  TGACGGCGGCCAG---CAGGAGGATGATTCTGGAGAAGGAGAGGATGATGCGGAGGTTCAGCAAGAATGCCTGC  145
            .||||||||||||   |||||.||||||||.||||||||||||||.|||||.|||||.|||||.||||||||||
Sbjct   75  AGACGGCGGCCAGCATCAGGAAGATGATTCCGGAGAAGGAGAGGACGATGCTGAGGTGCAGCAGGAATGCCTGC  148

Query  146  ATAAATTTTCCACCCGGGATTATATCATGGAACCCTCCATCTTCAACACTCTGAAGAGGTATTTTCAGGCAGGA  219
            ||||.||||||||||||||.||.||||||||.||||||||||||||||||||||||||||||||.|||||||||
Sbjct  149  ATAAGTTTTCCACCCGGGACTACATCATGGAGCCCTCCATCTTCAACACTCTGAAGAGGTATTTCCAGGCAGGA  222

Query  220  GGGTCTCCAGAGAATGTTATCCAGCTCTTATCTGAAAACTACACCGCTGTGGCCCAGACTGTGAACCTGCTGGC  293
            |||||||||||.||.||.|||||||||||||||||.||||||||.||.|||||||||||.||||||||||||||
Sbjct  223  GGGTCTCCAGAAAACGTCATCCAGCTCTTATCTGAGAACTACACGGCAGTGGCCCAGACAGTGAACCTGCTGGC  296

Query  294  CGAGTGGCTCATTCAGACAGGTGTTGAGCCAGTGCAGGTTCAGGAAACTGTGGAAAATCACTTGAAGAGTTTGC  367
            .||||||||||||||||||||.||||||||.||||||||.|||||.|||||||||||.||||||||||||||||
Sbjct  297  TGAGTGGCTCATTCAGACAGGCGTTGAGCCTGTGCAGGTGCAGGAGACTGTGGAAAACCACTTGAAGAGTTTGC  370

Query  368  TGATCAAACATTTTGACCCCCGCAAAGCAGATTCTATTTTTACTGAAGAAGGAGAGACCCCAGCGTGGCTGGAA  441
            |||||||.||.||.|||||.||.|||||||||||||||||.|||||||||||||||||||||||.|||||.||.
Sbjct  371  TGATCAAGCACTTCGACCCTCGGAAAGCAGATTCTATTTTCACTGAAGAAGGAGAGACCCCAGCTTGGCTTGAG  444

Query  442  CAGATGATTGCACATACCACGTGGCGGGACCTTTTTTATAAACTGGCTGAAGCCCATCCAGACTGTTTGATGCT  515
            ||||||||.|||||.||.||.|||.|.||.||.||||||||..||||.||.||||||||.||||||||||||||
Sbjct  445  CAGATGATCGCACACACAACATGGAGAGATCTGTTTTATAAGTTGGCCGAGGCCCATCCTGACTGTTTGATGCT  518

Query  516  GAACTTCACCGTTAAGCTTATTTCTGACGCAGGGTACCAGGGGGAGATCACCAGTGTGTCCACAGCATGCCAGC  589
            .||||||||.||.|||||.||||||||.||.||||||||.||||||||||||||.|||||||||||.|||||||
Sbjct  519  CAACTTCACTGTGAAGCTCATTTCTGATGCGGGGTACCAAGGGGAGATCACCAGCGTGTCCACAGCCTGCCAGC  592

Query  590  AGCTAGAAGTGTTCTCGAGAGTGCTCCGGACCTCTCTAGCTACAATTTTAGATGGAGGAGAAGAAAACCTTGAA  663
            ||.|.|||||||||||.||||||||.||||||||||||||.||.||.||.|||||.|||||||||||||||||.
Sbjct  593  AGTTGGAAGTGTTCTCCAGAGTGCTTCGGACCTCTCTAGCCACGATCTTGGATGGGGGAGAAGAAAACCTTGAG  666

Query  664  AAAAATCTCCCTGAGTTTGCTAAGATGGTGTGCCACGGGGAGCACACGTACCTGTTTGCCCAGGCCATGATGTC  737
            ||||||||||||||||||||.||||||||.|||||.||.||||||||||||||||||||.||||||||||||||
Sbjct  667  AAAAATCTCCCTGAGTTTGCAAAGATGGTATGCCATGGCGAGCACACGTACCTGTTTGCACAGGCCATGATGTC  740

Query  738  CGTGCTGGCCCAGGAGGAGCAGGGGGGCTCCGCTGTGCGCAGGATCGCCCAGGAAGTGCAGCGCTTTGCCCAGG  811
            |||||||||.||||||||.|||||.||.||.||.|||||||||.||||.||||||||.||||||||.|||||||
Sbjct  741  CGTGCTGGCACAGGAGGAACAGGGTGGTTCTGCAGTGCGCAGGGTCGCTCAGGAAGTCCAGCGCTTCGCCCAGG  814

Query  812  AGAAAGGTCATGACGCCAGTCAGATCACACTAGCCTTGGGCACAGCTGCCTCCTACCCCAGGGCCTGCCAGGCT  885
            ||||.||.|||||.||||||||||||||.||.|||||||||||||||||||||||||||.|.||||||||.||.
Sbjct  815  AGAAGGGCCATGATGCCAGTCAGATCACGCTGGCCTTGGGCACAGCTGCCTCCTACCCCCGAGCCTGCCAAGCG  888

Query  886  CTCGGGGCCATGCTGTCCAAAGGAGCCCTGAACCCTGCTGACATCACCGTCCTGTTCAAGATGTTCACAAGCAT  959
            ||.||.|||||||||||||.||||||||||||.|||||.||||||||.|||.||||||||||||||||.|||||
Sbjct  889  CTTGGCGCCATGCTGTCCAGAGGAGCCCTGAATCCTGCAGACATCACGGTCTTGTTCAAGATGTTCACCAGCAT  962

Query  960  GGACCCTCCTCCGGTTGAACTTATCCGCGTTCCAGCCTTCCTGGACCTGTTCATGCAGTCACTCTTTAAACCAG  1033
            ||||||||||||.||.|||||.|||||.||.||.||||||||||||||||||||||||||.|||||.||.||||
Sbjct  963  GGACCCTCCTCCCGTGGAACTCATCCGGGTGCCGGCCTTCCTGGACCTGTTCATGCAGTCGCTCTTCAAGCCAG  1036

Query 1034  GGGCTCGGATCAACCAGGACCACAAGCACAAATACATCCACATCTTGGCGTACGCAGCAAGCGTGGTTGAGACC  1107
            ||||...||||||||||||||||||.|||||.||||||||||||.||||.|||||.||.||.||||||||||||
Sbjct 1037  GGGCCAAGATCAACCAGGACCACAAACACAAGTACATCCACATCCTGGCTTACGCTGCCAGTGTGGTTGAGACC  1110

Query 1108  TGGAAGAAGAACAAGCGAGTGAGCATCAATAAAGATGAGCTGAAGTCAACGTCAAAAGCTGTCGAAACCGTTCA  1181
            |||||||||||||||||.||.|||||....|||||.|||||.|||||.||||||||.|||.||||.||.||.||
Sbjct 1111  TGGAAGAAGAACAAGCGGGTCAGCATTGGCAAAGACGAGCTCAAGTCCACGTCAAAGGCTATCGAGACTGTCCA  1184

Query 1182  CAATTTGTGTTGCAACGAGAACAAAGGGGCCTCTGAACTAGTGGCAGAATTGAGCACACTTTATCAGTGTATTA  1255
            |||..||||.||||||||||||||||||||||||||.||.|||||.||..|||||||||||||||||||.|||.
Sbjct 1185  CAACCTGTGCTGCAACGAGAACAAAGGGGCCTCTGAGCTGGTGGCTGAGCTGAGCACACTTTATCAGTGCATTC  1258

Query 1256  GGTTTCCAGTGGTAGCAATGGGTGTGCTGAAGTGGGTGGATTGGACTGTATCAGAACCAAGGTACTTTCAGCTG  1329
            |||||||||||||.||.|||||.|||||.||||||||.||||||||.|||||.||.|||||||||||.||||||
Sbjct 1259  GGTTTCCAGTGGTGGCGATGGGCGTGCTCAAGTGGGTAGATTGGACCGTATCGGAGCCAAGGTACTTCCAGCTG  1332

Query 1330  CAGACTGACCATACCCCTGTCCACCTGGCGTTGCTGGATGAGATCAGCACCTGCCACCAGCTCCTGCACCCCCA  1403
            ||||||||.||.||.||.||.||||||||.|||.||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  CAGACTGATCACACTCCAGTTCACCTGGCCTTGTTGGATGAGATCAGCACCTGCCACCAGCTCCTGCACCCCCA  1406

Query 1404  GGTCCTGCAGCTGCTTGTTAAGCTTTTTGAGACTGAGCACTCCCAGCTGGACGTGATGGAGCAGCTTGAGTTGA  1477
            |||.|||||||||||||||||||||||||||||.||||||||||||||.|||||||||||||||||.|||||||
Sbjct 1407  GGTTCTGCAGCTGCTTGTTAAGCTTTTTGAGACAGAGCACTCCCAGCTAGACGTGATGGAGCAGCTCGAGTTGA  1480

Query 1478  AGAAGACACTGCTGGACAGGATGGTTCACCTGCTGAGTCGAGGTTATGTACTTCCTGTTGTCAGTTACATCCGA  1551
            |.|||||.|||||||||||||||||.|||||||||||.||.||.||.||.||.||.||.||||||||.|||||.
Sbjct 1481  AAAAGACCCTGCTGGACAGGATGGTGCACCTGCTGAGCCGCGGCTACGTCCTGCCGGTGGTCAGTTATATCCGC  1554

Query 1552  AAGTGTCTGGAGAAGCTGGACACTGACATTTCACTCATTCGCTATTTTGTCACTGAGGTGCTGGACGTCATTGC  1625
            ||.||||||||||||||||||||.|||||.||.|||||.|||||.||||||||||||||.|||||.|||||.||
Sbjct 1555  AAATGTCTGGAGAAGCTGGACACGGACATCTCCCTCATCCGCTACTTTGTCACTGAGGTTCTGGATGTCATCGC  1628

Query 1626  TCCTCCTTATACCTCTGACTTCGTGCAACTTTTCCTCCCCATCCTGGAGAATGACAGCATCGCAGGTACCATCA  1699
            .|||||.||.|||||.|||||.|||||.|||||||||||||||.||||.||||||||||||||.||.|||||||
Sbjct 1629  CCCTCCGTACACCTCAGACTTTGTGCAGCTTTTCCTCCCCATCTTGGAAAATGACAGCATCGCGGGCACCATCA  1702

Query 1700  AAACGGAAGGCGAGCATGACCCTGTGACGGAGTTTATAGCTCACTGCAAATCTAACTTCATCATGGTGAAC  1770
            |..|.||.||||||||||||||.|||||||||||.||.|||||||||||.||.|||||||||.||||||||
Sbjct 1703  AGGCAGAGGGCGAGCATGACCCCGTGACGGAGTTCATTGCTCACTGCAAGTCGAACTTCATCGTGGTGAAC  1773

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.