Nucleotide Global Alignment
Description
- Query:
- TRCN0000480131
- Subject:
- NR_046443.2
- Aligned Length:
- 6292
- Identities:
- 827
- Gaps:
- 5465
Alignment
Query 1 --------------------------------------------------ATGTCCCTCCGGAGGCACATTGGG 24
||||||||||||||||||||||||
Sbjct 1 AGAGGCAACCCGTGAGGCTAGAACCCCGAACGTGGTCGGTTGGAGAAAATATGTCCCTCCGGAGGCACATTGGG 74
Query 25 AACCCTGAGTATCTGATGAAAAGGATACCACAGAACCCAAGATACCAGCATATCAAATCAAGACTGGACACTGG 98
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AACCCTGAGTATCTGATGAAAAGGATACCACAGAACCCAAGATACCAGCATATCAAATCAAGACTGGACACTGG 148
Query 99 TAACAGTATGACTAAATATACTGAGAAGCTCGAAGAGATTAAGAAAAATTATAGATACAAAAAAGATGAGCTTT 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TAACAGTATGACTAAATATACTGAGAAGCTCGAAGAGATTAAGAAAAATTATAGATACAAAAAAGATGAGCTTT 222
Query 173 TCAAGAGACTAAAAGTTACAACTTTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTCTGATCAAACACTGGAA 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TCAAGAGACTAAAAGTTACAACTTTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTCTGATCAAACACTGGAA 296
Query 247 GTGACAGCTGAGGAGATTCAAAGGCTGGAAGACAATGATTCTGCAGCTTCAGACCCTGATGCTGAAACCACTGC 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GTGACAGCTGAGGAGATTCAAAGGCTGGAAGACAATGATTCTGCAGCTTCAGACCCTGATGCTGAAACCACTGC 370
Query 321 CAGGACCAATGGGAAAGGAAATCCAGGTGAGCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGAGCAG 394
||||||||||||||||||||||||
Sbjct 371 CAGGACCAATGGGAAAGGAAATCC-------------------------------------------------- 394
Query 395 GGGACTCCAGCCGCTCAACTCTTCAGAGTGTCATCAGTGGTGTTGGGGAACTGGATCTAGACAAAGGGCCAGTG 468
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 395 --------------------------AGTGTCATCAGTGGTGTTGGGGAACTGGATCTAGACAAAGGGCCAGTG 442
Query 469 AAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTGCTGCTAGATGTGCGTGATAG 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 443 AAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTGCTGCTAGATGTGCGTGATAG 516
Query 543 AGATTCTTACCAGCAGTGCCACATTGTTGGAGCTTACAGTTACCCAATTGCAACTCTGTCTAGAACAATGAACC 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 517 AGATTCTTACCAGCAGTGCCACATTGTTGGAGCTTACAGTTACCCAATTGCAACTCTGTCTAGAACAATGAACC 590
Query 617 CTTATTCAAATGATATTCTTGAATATAAAAATGCCCATGGCAAGATCATCATTCTGTATGACGATGATGAAAGG 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 591 CTTATTCAAATGATATTCTTGAATATAAAAATGCCCATGGCAAGATCATCATTCTGTATGACGATGATGAAAGG 664
Query 691 CTGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCTTCATGCTTTCCGGAG------- 757
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 665 CTGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCTTCATGCTTTCCGGAGGTCTAAA 738
Query 758 -------------------------------------------------------------------------- 757
Sbjct 739 AGTCTTAGCTCAGAAATTCCCGGAAGGACTGATTACTGGTTCCCTGCCAGCATCTTGCCAGCAGGCCCTTCCTC 812
Query 758 -------------------------------------------------------------------------- 757
Sbjct 813 CTGGGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGAGAATAAATGGAGATTTACCCCA 886
Query 758 -------------------------------------------------------------GCCGACTGAACCA 770
|||||||||||||
Sbjct 887 GAAGACTTAAAAAAGATAGAATATTATCTGGAAGAGGAGCAAGGGCCTGCAGATCATCCTAGCCGACTGAACCA 960
Query 771 AGCTAACTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCG 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 961 AGCTAACTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCG 1034
Query 845 CCAGCCACTCAAACCCCCGCTCCCTCAGCAGTGGTCACCTGCAAGGCAAACCCTGGAAG--------------- 903
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1035 CCAGCCACTCAAACCCCCGCTCCCTCAGCAGTGGTCACCTGCAAGGCAAACCCTGGAAGTAAAGACTTTGTCTC 1108
Query 904 -------------------------------------------------------------------------- 903
Sbjct 1109 ACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGAGCATTTCCCAAGTTGGGTCATTTCCAGAAACT 1182
Query 904 -------------------------------------------------------------------------- 903
Sbjct 1183 TCTGCAGAGGAAAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTTCCTCTCCCCT 1256
Query 904 -------------------------------------------------------------------------- 903
Sbjct 1257 CAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCC 1330
Query 904 -------------------------------------------------------------------------- 903
Sbjct 1331 CTGTTGTTTACAGCATATTTAAGTCTTGTGAAACTGTATAGGAAAAAAGTATCTACGTTTTTAGTTTTTTTGTT 1404
Query 904 -------------------------------------------------------------------------- 903
Sbjct 1405 TTGTTTTTTTTTAATAAGGTCCAGCTTGTTGGGTCTCTCTGTGTTGTTTTGTAAATACTTCAGTCACATCTGCC 1478
Query 904 -------------------------------------------------------------------------- 903
Sbjct 1479 CGTGTGCCTGTCCCTGCCACCTTTTCATTCACTGTTCTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGT 1552
Query 904 -------------------------------------------------------------------------- 903
Sbjct 1553 GAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCCACCCCAGCAGGCTCACT 1626
Query 904 -------------------------------------------------------------------------- 903
Sbjct 1627 CAGCAAGGAGCTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTGCCTGTGTACTCACTG 1700
Query 904 -------------------------------------------------------------------------- 903
Sbjct 1701 AAATTGAAGATGAGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCAGAAA 1774
Query 904 -------------------------------------------------------------------------- 903
Sbjct 1775 GGTATGCATGTGGGTGTCTTCACACCGGGGAGGAGGGCCTCTCATGGGAAAGCCCTGGCCACCACACCGGCCTG 1848
Query 904 -------------------------------------------------------------------------- 903
Sbjct 1849 TGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTGTGGTCAGTATATCAGTTATGACGCCCATTGCCCAGCTTC 1922
Query 904 -------------------------------------------------------------------------- 903
Sbjct 1923 AGTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACAC 1996
Query 904 -------------------------------------------------------------------------- 903
Sbjct 1997 ACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTGCTTAGAAATACAGTAT 2070
Query 904 -------------------------------------------------------------------------- 903
Sbjct 2071 TAGTCTAATTGAGTAATTAGTGCAATTTCCTGCTTACTTTTCATTCTCATGACTGAACTGTGATTAGGAAGTTG 2144
Query 904 -------------------------------------------------------------------------- 903
Sbjct 2145 TGATTATAGATTCTGGTTTTGGCCGGAATTTTGAATCAGCATTAATTGAATTGCTAAATGACTGACATTCATTC 2218
Query 904 -------------------------------------------------------------------------- 903
Sbjct 2219 CATTTAATTGGGGGAACAAAAGGCCTCAGGTAAGGATGAGGAACTCTGAAATCAGATGGAAAAGAGCGGTGTTA 2292
Query 904 -------------------------------------------------------------------------- 903
Sbjct 2293 ATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGC 2366
Query 904 -------------------------------------------------------------------------- 903
Sbjct 2367 TTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGCTACGGGGTAAGATTTGCCTTAACAGTACTA 2440
Query 904 -------------------------------------------------------------------------- 903
Sbjct 2441 TTTTCTCGCCACCAAAAAAAAAAAAAAAAAAAAAAAAAAATGCACCACAGTATTTCTAGCATGGGGGCTGTGTT 2514
Query 904 -------------------------------------------------------------------------- 903
Sbjct 2515 TGTATGAGAAATAAACGTAATAAATATCTCATAGAGACATATGGAAAAATAACTTTCAGATTCAGCCCAGTTCT 2588
Query 904 -------------------------------------------------------------------------- 903
Sbjct 2589 GTTTTAGAGTGTGTTTATTCTTCTCTACTTGATTTCCAAAGTGCAACATTTTCCGATGCTTTAGAAATCAAACA 2662
Query 904 -------------------------------------------------------------------------- 903
Sbjct 2663 AACCAGGGACATTGTTCAGATGTCAAGCCATGCCCAATTTTCCACAAGATTCAAGAATCTTGTATAAAATTCAG 2736
Query 904 -------------------------------------------------------------------------- 903
Sbjct 2737 CCAACGTACACATAGCTTTAATGAGGAGCCTGTCATGTTTCCCCATAAATTTATTGCCTGAGAACTTAGTTCAG 2810
Query 904 -------------------------------------------------------------------------- 903
Sbjct 2811 CCTTTGCTAATGCCAAAATGCTCTGGCTTTGTATTTTCTTTACAGCATAGATAGAAAAATGCACATTTTTCCAC 2884
Query 904 -------------------------------------------------------------------------- 903
Sbjct 2885 ACTCAGCTTTCCCCTAGCATGGACAAGATTTTCAGCCATTTTTGCCACATATACATTTTTAAGGAAAAAAGATT 2958
Query 904 -------------------------------------------------------------------------- 903
Sbjct 2959 TTTCTCTGTAAGAAAGTTCTGGTTATGCTGTTTTAAAGGTGACTTGTCAGGAGTTGAGACTTCCCTGCCGGATT 3032
Query 904 -------------------------------------------------------------------------- 903
Sbjct 3033 CTATTTTGAAAGTAAATGGTCTTCCCTCCTTGTTCCGATTCTGCGTTCCCATCGTCAGACAACTTTGGAGTATT 3106
Query 904 -------------------------------------------------------------------------- 903
Sbjct 3107 AGAAACCACTGTATATATGTGGAAAGCCAGGTCAGCCAGACCTGTTAGAATTGGTGTGCACTCACCTGAGAGAT 3180
Query 904 -------------------------------------------------------------------------- 903
Sbjct 3181 CTGGCAGGTTGGATATATTTATGTGTATTTCTCCACAGTGCTTGCTTTGCCCTGTTGGTAAGGATTTTAAATAA 3254
Query 904 -------------------------------------------------------------------------- 903
Sbjct 3255 CCATGCTCAAAAGAGCTGTTCTAATCTGCGTTTTGCATGTTAAGTGTTAATATCAAACATTCTTTACGTGCTCG 3328
Query 904 -------------------------------------------------------------------------- 903
Sbjct 3329 AGGTATTGCTTTTAACATTCTACTTTGCCAGTTTCTTCATTAGATTAATTGACATGTATTATTTAAATGACCAG 3402
Query 904 -------------------------------------------------------------------------- 903
Sbjct 3403 TGATGCTTTGTGCAATTATGAATGTTGAAGATTAAAGTACATAGTTACTAATTTGTCGTTTGCTATTAATATGC 3476
Query 904 -------------------------------------------------------------------------- 903
Sbjct 3477 TGAAAACTGCCAACTTCTCTCTTCTTTTCTGTCGAGATGATTTGGGGGAGCCACAGGAGACTGGTGTGATTTTT 3550
Query 904 -------------------------------------------------------------------------- 903
Sbjct 3551 GCTGCATCTCCTAGGAAAGCATTTTTTAAAAAAAATAAATGAATCAGGAAATCAGTCCAATTAGGGCAGGGGGC 3624
Query 904 -------------------------------------------------------------------------- 903
Sbjct 3625 CTCAGCTCTCCAGTCAGAAAGCCTGGATTTCTTTTCCTGCTCAGGCTGGGACTGAAGCCACCTTCAACAACTGG 3698
Query 904 -------------------------------------------------------------------------- 903
Sbjct 3699 ATCATGGCTTCCTACCAGCGTCTCAGGGGTTGACTAGCTGCCCTTGTCTGGGGCTTGTGAACCCTGAGACAGAA 3772
Query 904 -------------------------------------------------------------------------- 903
Sbjct 3773 GGTGCTTCATCGATGTACAACTACAGCACCCTGAACAGCAGTGATGGCCAAAGTTTAAATAATACCTTAAATGC 3846
Query 904 -------------------------------------------------------------------------- 903
Sbjct 3847 TTTAAAGGGGTTTGTGTTTAAGGAAGGGAGAAAAGAAAAAAAGAAAGGAAGGGAGAAAGAAGCAAGGAAATGGG 3920
Query 904 -------------------------------------------------------------------------- 903
Sbjct 3921 AAGAAGGGAGGGCAGAGAGAAGAAAAGAAGCAGAAAGCGAGAGAGAAAGGAGAAAGCTACATTACTTATTTGAA 3994
Query 904 -------------------------------------------------------------------------- 903
Sbjct 3995 AACAAAAGGAACACCCTGGGCTGTAATAATGTCAGGCTCAATCTCTTGAAAAAGTATGGAATGATTTAAATGGC 4068
Query 904 -------------------------------------------------------------------------- 903
Sbjct 4069 CTGCATTCATTTTATCTTTTATCTTTTTTTTTTTTTTTAACCTTTAGTGGTTAGCCAGGACCAGCACGATCATA 4142
Query 904 -------------------------------------------------------------------------- 903
Sbjct 4143 TTGGGCTTGGTATAAATCCGAATGAAAAGAGACCAAATAACATTCATTAGTTGCTCAGGGATTTTTCCTGTGGT 4216
Query 904 -------------------------------------------------------------------------- 903
Sbjct 4217 GCTATTTAAATTATACAAAAATTCTTAAGACTTTAGGCTACTCGACCAAGAAAACAGAACAAAACAAAAAATCG 4290
Query 904 -------------------------------------------------------------------------- 903
Sbjct 4291 TGTTTTCTCTAATTCCCTTGTGGAATGTAAGTGAAATCAGAGTCCTAGGCTAGGAAGAAATACGTAGGTAATTT 4364
Query 904 -------------------------------------------------------------------------- 903
Sbjct 4365 TTCTTGTGTTGGTTTTGGTTTCTGTCATGTTGTTTATTGGCTATAGATTCTGTCTTTTATGTTATCTGACTTTT 4438
Query 904 -------------------------------------------------------------------------- 903
Sbjct 4439 TTAGAGCGAATAATTAGTTTCTGTCCACCTGGATTTAAATCCATGACCACCTTCTTGCTCTACTCTGAAGATAA 4512
Query 904 -------------------------------------------------------------------------- 903
Sbjct 4513 TCAGTAAGAACCTTTCTTTCTCCAGTTCTAAAACGTTCTCAGTGTCTTTAATGTGTGTTTATTTTCTTCCCAAT 4586
Query 904 -------------------------------------------------------------------------- 903
Sbjct 4587 TCTTTCAAAGATTTAACTCCCACGATACTTTTTTTTCCCCAGGAAACACCGCAAATGTGTGGAATATAATTCAC 4660
Query 904 -------------------------------------------------------------------------- 903
Sbjct 4661 CAGTTTAATTATGTGAGCATGTTGAGTACTTACATGCAGGTCCATTAATTTTTCACTAACAATTATTTTTTCAT 4734
Query 904 -------------------------------------------------------------------------- 903
Sbjct 4735 GCAAAAGCAATAAATAACATTGTGCTTCCAAAATGTTCAGAATACATTTGGGTAGTAATACTTTCCTAGATTTA 4808
Query 904 -------------------------------------------------------------------------- 903
Sbjct 4809 CAATAATTATTGAAATTATTATTATGACATCTTTAAATGGATACACAGGTCAGTTACAACATAAAAAATGTAAT 4882
Query 904 -------------------------------------------------------------------------- 903
Sbjct 4883 GGTGGAAATTTGTCAGCCTTGAATTCAGGCAGAACAGGATTCGGTGCATGATTTTATGTGTTTTCGAAACGGTG 4956
Query 904 -------------------------------------------------------------------------- 903
Sbjct 4957 TCTGTCACATTGTGATCCCCTGATGGCTCCCCTCTCTGTTGCTGATCCTCTTTGTTCTGTACAGAAGCAAATTC 5030
Query 904 -------------------------------------------------------------------------- 903
Sbjct 5031 TCACCTGTGTAACATCCTGAAGCACCTGGTAAAATGTGAGGCAAAGAGAGGCCACTTCTCAAATGCTGTGGACG 5104
Query 904 -------------------------------------------------------------------------- 903
Sbjct 5105 GATGGGCTGCATCTTTTAAAGGATATCAATATGTCTTCCTGTTGCAATTATTTTGACTATAAGCTCCCAGAGAG 5178
Query 904 -------------------------------------------------------------------------- 903
Sbjct 5179 TGAAAATCACCAACCCTGTGACAGTGGCCCTTAATAAGTGTTCATGAATAAATGAATTGAACCTGTCAAGATTG 5252
Query 904 -------------------------------------------------------------------------- 903
Sbjct 5253 AAGTTTGGATGTGATGCCCACTGTGGTGGCCACTCAGTGCTAGTCTGTCATTCTGGAGACCCAGAAAGCTCGTT 5326
Query 904 -------------------------------------------------------------------------- 903
Sbjct 5327 ATCTTCTGTCCCCCTTGTGTATCCTGCCTTTGTGGGCGAGGCATTCAAAACCCTGAGGTTTTTAGATCTCCCTC 5400
Query 904 -------------------------------------------------------------------------- 903
Sbjct 5401 TACAGGAAGTACCCAGAGAGCTGCTGGGGGTGTTATTACCCTGTCTCTGCCAGGCTTAAAGTATCCTCCCAAAT 5474
Query 904 -------------------------------------------------------------------------- 903
Sbjct 5475 TCAGCACGCAAAGGTCACACACCACCCCCATCTTAAGAGTAGGTTTTCTCTTTTGTTTCAAATCTTGAAGATTT 5548
Query 904 -------------------------------------------------------------------------- 903
Sbjct 5549 CCAGAAAATAATAATACTAGCCAATGTTTGTGGAGAGCTTACTTTGCTCCTAGATTCTTCATTATATGTTTTGA 5622
Query 904 -------------------------------------------------------------------------- 903
Sbjct 5623 CCCATTTAATTTCCACAACAGTCTGATGAGGCAGGCACCCCCATTTTCAGATGAGGAGACTGAGGTTCGGGTAG 5696
Query 904 -------------------------------------------------------------------------- 903
Sbjct 5697 AAATTAAGTGACTCAGGTTTGCCTTCAGTCTCTGACCAAGGGTTTGAAAAGCCAGGAGCCAGCCTGAGAACTGT 5770
Query 904 -------------------------------------------------------------------------- 903
Sbjct 5771 GGCTCCAGAGGGTGTTCTTTCAGCCACTCCGCTCTATGCTTCTCACTCTGGGTGGGCACAACCATGTTCTCCTT 5844
Query 904 -------------------------------------------------------------------------- 903
Sbjct 5845 TGGTGATGCCTCTAACTTACCGTGAAAATGTACCTTTCCCTTCGCTATTGGCTTCCCTTCCCTCCTAGTCAGCC 5918
Query 904 -------------------------------------------------------------------------- 903
Sbjct 5919 GAGATTCTTTTGAAAACTTTCCTCCGCTTGCCTGCACAAAAGGCGATGGAAATTCAGGAACTGAAACATCTGCT 5992
Query 904 -------------------------------------------------------------------------- 903
Sbjct 5993 CTGGGGAATGCGTATTTCCACATTTCCACCGCCTGTGTCTGCTGTCTTATCTTGAAGACAGGTGCTCCAGGGCT 6066
Query 904 -------------------------------------------------------------------------- 903
Sbjct 6067 TCCGAGGTTATTTTGTCTGTTAATGGACACCTTGCAAAGTACCACTTAAGGAATGAGAATTACAAACTTTTAAT 6140
Query 904 -------------------------------------------------------------------------- 903
Sbjct 6141 TATATTGTAGGGGGAAAAAAGTAGGCTGTTTTCCTGATAGGTCTAGCCATTCATTCAGTAAACCATATTGATAT 6214
Query 904 -- 903
Sbjct 6215 GA 6216
