Nucleotide Global Alignment
Description
- Query:
- TRCN0000480131
- Subject:
- NR_130781.1
- Aligned Length:
- 3601
- Identities:
- 776
- Gaps:
- 2706
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGGGCTGGAGGGGGGTAGGAAGCTAGATTAGTAGCCAGACGTGAGGCTAGAACCCCGAGCGTGGTCGGTTGGA 74
Query 1 ------ATGTCCCTCCGGAGGCACATTGGGAACCCTGAGTATCTGATGAAAAGGATACCACAGAACCCAAGATA 68
|||||...||||||||||||||||||.|||||||||||||..|.|.|||||||||||||||||||.||
Sbjct 75 GCAAATATGTCTGCCCGGAGGCACATTGGGAATCCTGAGTATCTGACCAGACGGATACCACAGAACCCAAGGTA 148
Query 69 CCAGCATATCAAATCAAGACTGGACACTGGTAACAGTATGACTAAATATACTGAGAAGCTCGAAGAGATTAAGA 142
.||.|||.||||.|||||||||||.|||||||||||.|||||.|||||.|.|||||||||.|||||||||||.|
Sbjct 149 TCAACATGTCAAGTCAAGACTGGATACTGGTAACAGCATGACCAAATACATTGAGAAGCTAGAAGAGATTAAAA 222
Query 143 AAAATTATAGATACAAAAAAGATGAGCTTTTCAAGAGACTAAAAGTTACAACTTTTGCCCAGCTGATCATCCAA 216
|||||||||||||||||||||||||.|||||||||||||||||||||||.|||||||||||||||.||||.|||
Sbjct 223 AAAATTATAGATACAAAAAAGATGAACTTTTCAAGAGACTAAAAGTTACCACTTTTGCCCAGCTGGTCATTCAA 296
Query 217 GTTGCTTCCCTCTCTGATCAAACACTGGAAGTGACAGCTGAGGAGATTCAAAGGCTGG---------------- 274
||.||||||||.||.||||||||||||||||||||||||||||||||.||||||||.|
Sbjct 297 GTCGCTTCCCTGTCAGATCAAACACTGGAAGTGACAGCTGAGGAGATCCAAAGGCTCGAAGGGTCTTACTCTGT 370
Query 275 -------------------------------------------------------------------------- 274
Sbjct 371 AACTCAGGCTGGCCTGGGACTTGCTGTGTAGCAAGAGCTGGCTTCAAGCTTACATCGATCCTCCTGTCTCATCC 444
Query 275 -------------------------------------------AAGACAATGATTCTGCAGCTTCAGACCCTGA 305
|||||||||||||||||.|||||||..||||
Sbjct 445 TCTGAAATGCTAAGACTATGGCTGTGAGCCACCACACCCATTCAAGACAATGATTCTGCAACTTCAGAGGCTGA 518
Query 306 TGCTGAAACCACTGCCAGGACCAATGGGAAAGGAAATCCAGGTGAGCAGTCGCCGAGCCCTGAGCAGTTCATAA 379
||||||||...||||||.|||.|||||||||||.|..||.|..||.|||||.||.|||||||..||||||||.|
Sbjct 519 TGCTGAAATTGCTGCCAAGACAAATGGGAAAGGGAGCCCTGAGGAACAGTCACCCAGCCCTGTCCAGTTCATCA 592
Query 380 ACAACGCAGGAGCAGGGGACTCCAGCCGCTCAACTCTTCAGAGTGTCATCAGTGGTGTTGGGGAACTGGATCTA 453
|||.|.|.|||||||||||||||||||||||.|||||.|||||.|||||||||||.|||||||||||||||.||
Sbjct 593 ACAGCACGGGAGCAGGGGACTCCAGCCGCTCCACTCTGCAGAGCGTCATCAGTGGCGTTGGGGAACTGGATGTA 666
Query 454 GACAAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTGCTGCT 527
||||||||||..||.|||||||.|||.|||.||..|||||||||.||||||||.|||||.||||||||||||||
Sbjct 667 GACAAAGGGCTCGTAAAGAAAGAAGAACCCAATGGCAAAGACAAGCCTTATCCGGACTGTCCCTTCCTGCTGCT 740
Query 528 AGATGTGCGTGATAGAGATTCTTACCAGCAGTGCCACATTGTTGGAGCTTACAGTTACCCAATTGCAACTCTGT 601
||||||.||.||.|||||||||||.||||||||.||||||||.||.||||||||||||||.|||||||||||.|
Sbjct 741 AGATGTTCGAGACAGAGATTCTTATCAGCAGTGTCACATTGTCGGGGCTTACAGTTACCCCATTGCAACTCTAT 814
Query 602 CTAGAACAATGAACCCTTATTCAAATGATATTCTTGAATATAAAAATGCCCATGGCAAGATCATCATTCTGTAT 675
|.||.|||||||||||.|||||||||||.||||||||.||.||.||.|||||.||||||||||||||..|.||.
Sbjct 815 CCAGGACAATGAACCCCTATTCAAATGACATTCTTGAGTACAAGAACGCCCACGGCAAGATCATCATCTTATAC 888
Query 676 GACGATGATGAAAGGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCTTCATGCT 749
|||||.||.||.|||||||||||.||||||||||||||||||||.||||||||.||||||||||||||||||||
Sbjct 889 GACGAGGACGAGAGGCTGGCCAGCCAGGCGGCCACCACCATGTGTGAGCGTGGGTTTGAAAACCTCTTCATGCT 962
Query 750 TTCCGGAG------------------------------------------------------------------ 757
||||||.|
Sbjct 963 TTCCGGGGGTCTGAAAGTCTTAGCTCAGAAGTTCCCAGAAGGACTGGTCACTGGTTCCCTGCCAGCCTCTTGCC 1036
Query 758 -------------------------------------------------------------------------- 757
Sbjct 1037 AGCAGGCCCTCCCTTTTGGTTCTGTCCGGAAACGACGTGGCCCCAAAATGCCAGCCCTGCCAGCTGAGAACAAG 1110
Query 758 -------------------------------------------------------------------------- 757
Sbjct 1111 TGGAGATTTACCCCAGAAGACTTAAAAAAGATAGAATGTTACCTGGAAGAGGACCAGGGACCAGCAGACAACCC 1184
Query 758 --GCCGACTGAACCAAGCTAACTCCTCCGGAAGAGAGTCCAAGGTGCCTG-GTGCCCGAAGCGCT---CAGAAT 825
|||||||||||||...||||||..|.||||.|||.||.||||||.||| .|||| |||.| |||||.
Sbjct 1185 TAGCCGACTGAACCAGAATAACTCTGCTGGAAAAGACTCGAAGGTGGCTGCTTGCC----GCGGTGGCCAGAAC 1254
Query 826 CTG----CCAGGTGGCGGCCCCGCCAGCCACTCAAACCCCCGCTCCCTCAGCAGTGGTCACCTGCAAGGCAAAC 895
||| ||| ||.|.||.|||||||||||.|.|||||||.|.||||.|||.|||||||||||||||||||
Sbjct 1255 CTGCCCACCA----GCTGTCCTGCCAGCCACTCGAGCCCCCGCACGCTCACCAGCGGTCACCTGCAAGGCAAAC 1324
Query 896 CCTGGAAG------------------------------------------------------------------ 903
||||||||
Sbjct 1325 CCTGGAAGTGAAGGCCTGTGTTGTTTACTCAAATAAATGCCCCCCTCCTTTCGGAACCCTCAGCGCTCCCAACT 1398
Query 904 -------------------------------------------------------------------------- 903
Sbjct 1399 TGGTCCTTTTCAGAACTGCTGTAGAGAAACAGCCATGCTACACGGGCTGGACCAGGCCCACTTGTCCGTCTGCA 1472
Query 904 -------------------------------------------------------------------------- 903
Sbjct 1473 GCTCCACTCCCTTCACTCAGGAAGGAGTCTGACAGATGACCACAAAAACCAGAGGCTTGGCAGGCTCTAGTTGC 1546
Query 904 -------------------------------------------------------------------------- 903
Sbjct 1547 CCTCCATTGTTTACAGAAGATTCATGTCTTTTGAAATTGAATAGGAAAAAAGAAAGATACTTTCTTTTAAATAA 1620
Query 904 -------------------------------------------------------------------------- 903
Sbjct 1621 GGTCCAGCCTGTTTGGTCTGTAACCAGTGTTGTTCTGTAAATAATTCAGTCACATCTGCTGGTGTGTTCTTCCC 1694
Query 904 -------------------------------------------------------------------------- 903
Sbjct 1695 AGCTAGCTTTTTTCATTCACTGTTGATTCATGAAAGATTCTCCAGGTGGGCCTGGAATTGGCCGCTGTCCCCAC 1768
Query 904 -------------------------------------------------------------------------- 903
Sbjct 1769 AGGTGCAGATGAGTTCTTGGTTTCTGCAGCCCACAGTCCTCACACTGAGTCTTAGCTCGCTCTGGAGGCTGCAG 1842
Query 904 -------------------------------------------------------------------------- 903
Sbjct 1843 GCTCTGCTGGGCATTTGAAGCTGAGGGGTGGTCTGTGAGCATGGGTGCATCTTGCTGGTTTAGCAGAGAGGCTC 1916
Query 904 -------------------------------------------------------------------------- 903
Sbjct 1917 TGTGCAAAATGATCCTCTCCTTAAATGGTTTCCTGGGACCACAAAGATGTGTGTTCAGCTTTCCTCACCAGAAG 1990
Query 904 -------------------------------------------------------------------------- 903
Sbjct 1991 GAGGGCCCAGTACAGGAAGACCCCAGCAACCTGCGGGTCTGTGCTGAGAGCCTTGGAAGGCCACCACAGCTGTC 2064
Query 904 -------------------------------------------------------------------------- 903
Sbjct 2065 CCCTTCATAATGAGCCTTATATCAATTAAAATTTCCCATTGCCTGATGTGAGTCCAGCTATGTTAAAGGGATAG 2138
Query 904 -------------------------------------------------------------------------- 903
Sbjct 2139 AAATCACAGTCATTTGAAAGCATCAGCTTCACACGGACAAGGGGACACACAGGTGAGGGGGACTCAGGAGTCCT 2212
Query 904 -------------------------------------------------------------------------- 903
Sbjct 2213 TTGTCGGGGCTGACAACCCCTTAAGCCCTTGCTTAAAAATACAGTATTAGTCTAATTGAGTAATTAGTGCAATT 2286
Query 904 -------------------------------------------------------------------------- 903
Sbjct 2287 TCCTGCTTGCTTTTCATTCTCAGACTGAGCTGTGATTAGGAGGCTGTGATTATAGATTCTGGTTTTGGCCGGAA 2360
Query 904 -------------------------------------------------------------------------- 903
Sbjct 2361 TTTTGAATCGGCATTAATTGAATTGCTAGATGACTGACATCCATTCTATTTAATTGGGGGAACAAAAGACCTCA 2434
Query 904 -------------------------------------------------------------------------- 903
Sbjct 2435 GGTAAGGATGAGGCCCATGAAGTCAGAGGGAAGGACGAGCCTTGTTAATTTTTATGGTCTGTGATCGTAGCTGT 2508
Query 904 -------------------------------------------------------------------------- 903
Sbjct 2509 GATAAGGGACTAAAGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCAGCTGAAAATTGCCT 2582
Query 904 -------------------------------------------------------------------------- 903
Sbjct 2583 ACCCTTAGGTTACTGCTGCTGGGTGAGAGTCGCCTTAACAGTGCTATTTTCTCACCACTTTAGGAAAAAAAGAA 2656
Query 904 -------------------------------------------------------------------------- 903
Sbjct 2657 AAAGGCAAAGGCCCACAGTATTTCTAGCAGGGAGGCTGTGTTTGTAAGAGAAATAAACGTAATAAATATCTCAT 2730
Query 904 -------------------------------------------------------------------------- 903
Sbjct 2731 GGAGACATATGGAAAAATAACTCAGTCAACCCAGCCCCGCTTCAGAGTATGTTTATTCTTCTCCACTTGATTTC 2804
Query 904 -------------------------------------------------------------------------- 903
Sbjct 2805 CAGAGTGCAACATTTTCCAATGCTTTAGAAATCAAACAAACCAGGGACATTGTTCAGATGTCAGGCCGTGCCCA 2878
Query 904 -------------------------------------------------------------------------- 903
Sbjct 2879 AATTTCCACAAGATTCAAGAATCGTGTATAAAATTCAGCCAACGTACACATAGCTTTAATGAGGAGCCTGTCGT 2952
Query 904 -------------------------------------------------------------------------- 903
Sbjct 2953 GTTTCCCCATAAATTTATTGCCTGAGAGCTTGGTTCAGCCTTTTGCTAATGCCAACATGCACTGGCTTTTTATT 3026
Query 904 -------------------------------------------------------------------------- 903
Sbjct 3027 TTCTTTACAGCATAGATCAAAAAATGCAAATTTTTCCACACTCAACTTTCCCCTAGCATGGACAAGATTTTCAG 3100
Query 904 -------------------------------------------------------------------------- 903
Sbjct 3101 TCATCTTTGACACGTATACATTTGTAATGAAAATACCTTTCCTCGGTGACAGAGTTCTGGTTTGCCAGTTTAAC 3174
Query 904 -------------------------------------------------------------------------- 903
Sbjct 3175 ATCAGCCAGTCAGGAGGTAGACCTCTACACCCAATTCTGTTTTGGAAGTCTCTGTCTGTTCCTGATCTGCATTC 3248
Query 904 -------------------------------------------------------------------------- 903
Sbjct 3249 CCACCAATGGATGTTAGTGTTGGAAATGACTGTATATACGTACAGAGACTGTTTCGGCAAAGCTGTTAGAATTG 3322
Query 904 -------------------------------------------------------------------------- 903
Sbjct 3323 CTGTGTATTTACTGGCGTGGTCTAGCAGGCTGAATGTATTTCCATGTGTTTCTCCATAGCTCTTTGCCCTGTTG 3396
Query 904 -------------------------------------------------------------------------- 903
Sbjct 3397 GCAAGAGTCTCAAACTTCAAGAGAGCCGACCCCTTCTGCACTCAGTGTTCCTCTCCAACACTGTTGCTTCCTAA 3470
Query 904 -------------------------------------------------------------------------- 903
Sbjct 3471 CGTTCCACTTTACCAGTTTCTTCATTAGATTATTTGACATGTATTATTTAAATGATCAGTGATACTTTGTGCAA 3544
Query 904 ------------------------------------------------- 903
Sbjct 3545 TTATGAATGTTGAAGATTAAAGAACGTAGTTACTAAAAAAAAAAAAAAA 3593
