Nucleotide Global Alignment

Description

• Query: TRCN0000480131
• Subject: XM_006505210.3
• Aligned Length: 1137
• Identities: 729
• Gaps: 294

Alignment

Query    1  AT-GTCCCTCCGGAG-GCACATTGGGAACC-----CTG---AGTATCTGATGAAAAGGATACCACAGAACCCAA  64
            || ||||||    || .||.||.|..||||     |||   |||||||||..|.|.||||||||||||||||||
Sbjct    1  ATGGTCCCT----AGTTCAAATAGCCAACCTCACTCTGAGAAGTATCTGACCAGACGGATACCACAGAACCCAA  70

Query   65  GATACCAGCATATCAAATCAAGACTGGACACTGGTAACAGTATGACTAAATATACTGAGAAGCTCGAAGAGATT  138
            |.||.||.|||.||||.|||||||||||.||||                                         
Sbjct   71  GGTATCAACATGTCAAGTCAAGACTGGATACTG-----------------------------------------  103

Query  139  AAGAAAAATTATAGATACAAAAAAGATGAGCTTTTCAAGAGACTAAAAGTTACAACTTTTGCCCAGCTGATCAT  212
                   ||||||||||||||||||||||.|||||||||||||||||||||||.|||||||||||||||.||||
Sbjct  104  -------ATTATAGATACAAAAAAGATGAACTTTTCAAGAGACTAAAAGTTACCACTTTTGCCCAGCTGGTCAT  170

Query  213  CCAAGTTGCTTCCCTCTCTGATCAAACACTGGAAGTGACAGCTGAGGAGATTCAAAGGCTGGAAGACAATGATT  286
            .|||||.||||||||.||.||||||||||||||||||||||||||||||||.||||||||.|||||||||||||
Sbjct  171  TCAAGTCGCTTCCCTGTCAGATCAAACACTGGAAGTGACAGCTGAGGAGATCCAAAGGCTCGAAGACAATGATT  244

Query  287  CTGCAGCTTCAGACCCTGATGCTGAAACCACTGCCAGGACCAATGGGAAAGGAAATCCAGGTGAGCAGTCGCCG  360
            |||||.|||||||..||||||||||||...||||||.|||.|||||||||||.|..||.|..||.|||||.||.
Sbjct  245  CTGCAACTTCAGAGGCTGATGCTGAAATTGCTGCCAAGACAAATGGGAAAGGGAGCCCTGAGGAACAGTCACCC  318

Query  361  AGCCCTGAGCAGTTCATAAACAACGCAGGAGCAGGGGACTCCAGCCGCTCAACTCTTCAGAGTGTCATCAGTGG  434
            |||||||..||||||||.||||.|.|.|||||||||||||||||||||||.|||||.|||||.|||||||||||
Sbjct  319  AGCCCTGTCCAGTTCATCAACAGCACGGGAGCAGGGGACTCCAGCCGCTCCACTCTGCAGAGCGTCATCAGTGG  392

Query  435  TGTTGGGGAACTGGATCTAGACAAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTG  508
            .|||||||||||||||.||||||||||||..||.|||||||.|||.|||.||..|||||||||.||||||||.|
Sbjct  393  CGTTGGGGAACTGGATGTAGACAAAGGGCTCGTAAAGAAAGAAGAACCCAATGGCAAAGACAAGCCTTATCCGG  466

Query  509  ACTGCCCCTTCCTGCTGCTAGATGTGCGTGATAGAGATTCTTACCAGCAGTGCCACATTGTTGGAGCTTACAGT  582
            ||||.||||||||||||||||||||.||.||.|||||||||||.||||||||.||||||||.||.|||||||||
Sbjct  467  ACTGTCCCTTCCTGCTGCTAGATGTTCGAGACAGAGATTCTTATCAGCAGTGTCACATTGTCGGGGCTTACAGT  540

Query  583  TACCCAATTGCAACTCTGTCTAGAACAATGAACCCTTATTCAAATGATATTCTTGAATATAAAAATGCCCATGG  656
            |||||.|||||||||||.||.||.|||||||||||.|||||||||||.||||||||.||.||.||.|||||.||
Sbjct  541  TACCCCATTGCAACTCTATCCAGGACAATGAACCCCTATTCAAATGACATTCTTGAGTACAAGAACGCCCACGG  614

Query  657  CAAGATCATCATTCTGTATGACGATGATGAAAGGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGAT  730
            ||||||||||||..|.||.|||||.||.||.|||||||||||.||||||||||||||||||||.||||||||.|
Sbjct  615  CAAGATCATCATCTTATACGACGAGGACGAGAGGCTGGCCAGCCAGGCGGCCACCACCATGTGTGAGCGTGGGT  688

Query  731  TTGAAAACCTCTTCATGCTTTCCGGAG-----------------------------------------------  757
            |||||||||||||||||||||||||.|                                               
Sbjct  689  TTGAAAACCTCTTCATGCTTTCCGGGGGTCTGAAAGTCTTAGCTCAGAAGTTCCCAGAAGGACTGGTCACTGGT  762

Query  758  --------------------------------------------------------------------------  757
                                                                                      
Sbjct  763  TCCCTGCCAGCCTCTTGCCAGCAGGCCCTCCCTTTTGGTTCTGTCCGGAAACGACGTGGCCCCAAAATGCCAGC  836

Query  758  --------------------------------------------------------------------------  757
                                                                                      
Sbjct  837  CCTGCCAGCTGAGAACAAGTGGAGATTTACCCCAGAAGACTTAAAAAAGATAGAATGTTACCTGGAAGAGGACC  910

Query  758  ---------------------GCCGACTGAACCAAGCTAACTCCTCCGGAAGAGAGTCCAAGGTGCCTG-GTGC  809
                                 |||||||||||||...||||||..|.||||.|||.||.||||||.||| .|||
Sbjct  911  AGGGACCAGCAGACAACCCTAGCCGACTGAACCAGAATAACTCTGCTGGAAAAGACTCGAAGGTGGCTGCTTGC  984

Query  810  CCGAAGCGCT---CAGAATCTG----CCAGGTGGCGGCCCCGCCAGCCACTCAAACCCCCGCTCCCTCAGCAGT  876
            |    |||.|   |||||.|||    |||    ||.|.||.|||||||||||.|.|||||||.|.||||.|||.
Sbjct  985  C----GCGGTGGCCAGAACCTGCCCACCA----GCTGTCCTGCCAGCCACTCGAGCCCCCGCACGCTCACCAGC  1050

Query  877  GGTCACCTGCAAGGCAAACCCTGGAAG  903
            |||||||||||||||||||||||||||
Sbjct 1051  GGTCACCTGCAAGGCAAACCCTGGAAG  1077