Nucleotide Global Alignment
Description
- Query:
- TRCN0000480182
- Subject:
- XR_002957350.1
- Aligned Length:
- 2970
- Identities:
- 1401
- Gaps:
- 1565
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTAGATCTCTTAAAAAGATGGACCCTCAGCGGCGCTTCCTCGTAGCGAGCCTAGTGGCGGGTGTTTGCATTGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AACGTGAGCGCGACCCGACCTTAAAGAGTGGGGAGCAAAGGGAGGACAGAGCCCTTTAAAACGAGGCGGGTGGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCCTGCCCCTTTAAGGGCGGGGCGTCCGGACGACTGTATCTGAGCCCCAGACTGCCCCGAGTTTCTGTCGCAGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTGCGAGGAAAGGCCCCTAGGCTGGGTCTGGGTGCTTGGCGGCGGCGGCTTCCTCCCCGCTCGTCCTCCCCGGG 296
Query 1 --------------------------------------ATGGAAGCACCTGACTACGAAGTGCTATCCGTGCGA 36
||||||||||||||||||||||||||||||||||||
Sbjct 297 CCCAGAGGCACCTCGGCTTCAGTCATGCTGAGCAGAGTATGGAAGCACCTGACTACGAAGTGCTATCCGTGCGA 370
Query 37 GAACAGCTATTCCACGAGAGGATCCGCGAGTGTATTATATCAACACTTCTGTTTGCAACACTGTACATCCTCTG 110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GAACAGCTATTCCACGAGAGGATCCGCGAGTGTATTATATCAACACTTCTGTTTGCAACACTGTACATCCTCTG 444
Query 111 CCACATCTTCCTGACCCGCTTCAAGAAGCCTGCTGAGTTCACCACAGTGGATGATGAAGATGCCACCGTCAACA 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CCACATCTTCCTGACCCGCTTCAAGAAGCCTGCTGAGTTCACCACAGTGGATGATGAAGATGCCACCGTCAACA 518
Query 185 AGATTGCGCTCGAGCTGTGCACCTTTACCCTGGCAATTGCCCTGGGTGCTGTCCTGCTCCTGCCCTTCTCCATC 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AGATTGCGCTCGAGCTGTGCACCTTTACCCTGGCAATTGCCCTGGGTGCTGTCCTGCTCCTGCCCTTCTCCATC 592
Query 259 ATCAGCAATGAGGTGCTGCTCTCCCTGCCTCGGAACTACTACATCCAGTGGCTCAACGGCTCCCTCATCCATGG 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ATCAGCAATGAGGTGCTGCTCTCCCTGCCTCGGAACTACTACATCCAGTGGCTCAACGGCTCCCTCATCCATGG 666
Query 333 CCTCTGGAACCTTGTTTTTCTCTTCTCCAACCTGTCCCTCATCTTCCTCATGCCCTTTGCATATTTCTTCACTG 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CCTCTGGAACCTTGTTTTTCTCTTCTCCAACCTGTCCCTCATCTTCCTCATGCCCTTTGCATATTTCTTCACTG 740
Query 407 AGTCTGAGGGCTTTGCTGGCTCCAGAAAGGGTGTCCTGGGCCGGGTCTATGAGACAGTGGTGATGTTGATGCTC 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AGTCTGAGGGCTTTGCTGGCTCCAGAAAGGGTGTCCTGGGCCGGGTCTATGAGACAGTGGTGATGTTGATGCTC 814
Query 481 CTCACTCTGCTGGTGCTAGGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACAAGGCCAACAGAGAGTC 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CTCACTCTGCTGGTGCTAGGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACAAGGCCAACAGAGAGTC 888
Query 555 ACTCTATGACTTTTGGGAGTACTATCTCCCCTACCTCTACTCATGCATCTCCTTCCTTGGGGTTCTGCTGCTCC 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ACTCTATGACTTTTGGGAGTACTATCTCCCCTACCTCTACTCATGCATCTCCTTCCTTGGGGTTCTGCTGCTCC 962
Query 629 TGTTGTGTACTCCACTGGGTCTCGCCCGCATGTTCTCCGTCACTGGGAAGCTGCTAGTCAAGCCCCGGCTGCTG 702
||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TGGTGTGTACTCCACTGGGTCTCGCCCGCATGTTCTCCGTCACTGGGAAGCTGCTAGTCAAGCCCCGGCTGCTG 1036
Query 703 GAAGACCTGGAGGAGCAGCTGTACTGCTCAGCCTTTGAGGAGGCAGCCCTGACCCGCAGGATCTGTAATCCTAC 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GAAGACCTGGAGGAGCAGCTGTACTGCTCAGCCTTTGAGGAGGCAGCCCTGACCCGCAGGATCTGTAATCCTAC 1110
Query 777 TTCCTGCTGGCTGCCTTTAGACATGGAGCTGCTACACAGACAGGTCCTGGCTCTGCAGACACAGAGGGTCCTGC 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TTCCTGCTGGCTGCCTTTAGACATGGAGCTGCTACACAGACAGGTCCTGGCTCTGCAGACACAGAGGGTCCTGC 1184
Query 851 TG------------------------------------------------------------------------ 852
||
Sbjct 1185 TGGGTATGTGGCTTCGTAGGGCTTGGGATACCTGGGTTTCCCCAAGGAGAGTAGCCCCTGGTTCCAGGTGCTTG 1258
Query 853 ------------------------GAGAAGAGGCGGAAGGCTTCAGCCTGGCAACGGAACCTGGGCTACCCCCT 902
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CTGACAGCCTCCCATCCCTGCACAGAGAAGAGGCGGAAGGCTTCAGCCTGGCAACGGAACCTGGGCTACCCCCT 1332
Query 903 GGCTATGCTGTGCTTGCTGGTGCTGACGGGCCTGTCTGTGCTCATTGTGGCCATCCACATCCTGGAGCTGCTCA 976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GGCTATGCTGTGCTTGCTGGTGCTGACGGGCCTGTCTGTGCTCATTGTGGCCATCCACATCCTGGAGCTGCTCA 1406
Query 977 TCGATGAGGCTGCCATGCCCCGAGGCATGCAGGT-------TGTACT--CATCTTTTACCTAATGGTGTCCTCA 1041
|||||||||||||||||||||||||||||||||| ||..|| ||.| |||||||||||||||||||
Sbjct 1407 TCGATGAGGCTGCCATGCCCCGAGGCATGCAGGTACCAGGCTGCCCTCCCACC--TTACCTAATGGTGTCCTCA 1478
Query 1042 GTTGTGGGCTTCTATAGCTCTCCACTCTTCCGGAGCCTGCGGCCCAGATGGCACGACACTGCCATGACGCAGAT 1115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1479 GTTGTGGGCTTCTATAGCTCTCCACTCTTCCGGAGCCTGCGGCCCAGATGGCACGACACTGCCATGACGCAGAT 1552
Query 1116 AATTGGGAACTGTGTCTGTCTCCTGGTCCTAAGCTCAGCACTTCCTGTCTTCTCTCGAACCCTGGGGCTCACTC 1189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1553 AATTGGGAACTGTGTCTGTCTCCTGGTCCTAAGCTCAGCACTTCCTGTCTTCTCTCGAACCCTGGGGCTCACTC 1626
Query 1190 GCTTTGACCTGCTGGGTGACTTTGGACGCTTCAACTGGCTGGGCAATTTCTACATTGTGTTCCTCTACAACGCA 1263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1627 GCTTTGACCTGCTGGGTGACTTTGGACGCTTCAACTGGCTGGGCAATTTCTACATTGTGTTCCTCTACAACGCA 1700
Query 1264 GCCTTTGCAGGCCTCACCACACTCTGTCTGGTGAAGACCTTCACTGCAGCTGTGCGGGCAGAGCTGATCCGGGC 1337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1701 GCCTTTGCAGGCCTCACCACACTCTGTCTGGTGAAGACCTTCACTGCAGCTGTGCGGGCAGAGCTGATCCGGGC 1774
Query 1338 CTTTGGGCTGGACAGACTGCCGCTGCCCGTCTCCGGTTTCCCCCAGGCATCTAGGAAGACCCAGCACCAG---- 1407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1775 CTTTGGGCTGGACAGACTGCCGCTGCCCGTCTCCGGTTTCCCCCAGGCATCTAGGAAGACCCAGCACCAGTGAC 1848
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 1849 CTCCAGCTGGGGGTGGGAAGGAAAAAACTGGACACTGCCATCTGCTGCCTAGGCCTGGAGGGAAGCCCAAGGCT 1922
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 1923 ACTTGGACCTCAGGACCTGGAATCTGAGAGGGTGGGTGGCAGAGGGGAGCAGAGCCATCTGCACTATTGCATAA 1996
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 1997 TCTGAGCCAGAGTTTGGGACCAGGACCTCCTGCTTTTCCATACTTAACTGTGGCCTCAGCATGGGGTAGGGCTG 2070
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 2071 GGTGACTGGGTCTAGCCCCTGATCCCAAATCTGTTTACACATCAATCTGCCTCACTGCTGTTCTGGGCCATCCC 2144
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 2145 CATAGCCATGTTTACATGATTTGATGTGCAATAGGGTGGGGTAGGGGCAGGGAAAGGACTGGGCCAGGGCAGGC 2218
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 2219 TCGGGAGATAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGG 2292
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 2293 ACCACCTGAAAGACCAAGGGGATAGGGAGGAGGAGGCTTCAGCCATCAGCAATAAAGTTGATCCCAGGGTTTGC 2366
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 2367 TTTGTTTTTTTAAAGCACCTGTCTCTGTGTATATTTGAACAGCCTTGCTCCCACCAGCCCGGCGTCTGCCCAGT 2440
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 2441 AAGAGAAGCAGAGGGGTCCTGCCCACCATCCTTTTCCTTCCCCTTCATCTATATTATTACCATCCTTTGGGGAC 2514
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 2515 TTGGATCTGGTGTTAGGCCATGCAGTTGGGCAGTGGGAAACTCCTCCATCCTCAGTCTTGCTTAAAGCTGGCTT 2588
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 2589 GTCCCCTGACTCCTCCTTATATTCATGGCCTTGTTTCTGTACCTTGAGTATTGGGGGTAGGACATGGGCATAGG 2662
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 2663 AGTAGGCTAACCTCCCCGATACACTCATACCTTCAGCCCTATCCTCCCTGGCTTAACTATTGGATATAGAGTAA 2736
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 2737 AATAAGTGGCTGGCTGACAAGGATTTTCATTTCCTACCTGAGAGAAGAATCTAGCTTTTTACTAGAGGCCATCA 2810
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 2811 GTTTCTTGAAAAGCCCATGTGCTATGTTGGGAGTAAGAGCGCAAAACTTAGGCTTATACAGATTGTGTATTGCA 2884
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 2885 CAGCTTCCAGGGACACCATTCACCTCATAGTCATTGTGTGGATAGTTACTATGATAGTTTTCTAATAAATGTCA 2958
Query 1408 ---------- 1407
Sbjct 2959 GTCATCTTGA 2968
