Nucleotide Global Alignment
Description
- Query:
- TRCN0000480225
- Subject:
- NM_001367537.1
- Aligned Length:
- 1614
- Identities:
- 975
- Gaps:
- 432
Alignment
Query 1 ATGGCCACCACGGTGACCTGCACCCGCTTCACCGACGAGTACCAGCTCTACGAGGATATTGGCAAGGGGGCTTT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CTCTGTGGTCCGACGCTGTGTCAAGCTCTGCACCGGCCATGAGTATGCAGCCAAGATCATCAACACCAAGAAGC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TGTCAGCCAGAGATCACCAGAAGCTGGAGAGAGAGGCTCGGATCTGCCGCCTTCTGAAGCATTCCAACATCGTG 222
.||.||.||||||||.|||.|.|||||||
Sbjct 1 -------------------------------------------ATGTCGACTTCTGAAACATCCAAACATCG-- 29
Query 223 CGTCTCCACGACAGCATCTCCGAGGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAGCTCTT 296
||||| ||.|.| |||
Sbjct 30 --------------------------------CCACT-----GTATAC-ATC---------------------- 43
Query 297 TGAAGACATTGTGGCGAGAGAGT--ACTACAGCGAGGCTGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGC 368
|.|||.|| |||||.|| ||.|||.|.| ||||||
Sbjct 44 -----AGATTCTG--GAGAGTGTTAACCACATCCA---------------------CCAGCA------------ 77
Query 369 CGTTCTCCATTGTCACCAAATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGCAAGT 442
||.|| ||||||||||.|||||.|||||.|||||||||||.|||||.||.||.|
Sbjct 78 ----------TGACA-----------TCGTCCACAGGGACCTGAAGCCTGAGAACCTGCTGCTGGCGAGTAAAT 130
Query 443 GCAAAGGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATGGTTT 516
||||.||.||.||.||.||||||||.||.||.||||||||.|||||.||.|||||.||.||||||||.||||||
Sbjct 131 GCAAGGGTGCCGCCGTCAAGCTGGCTGATTTTGGCCTAGCCATCGAAGTACAGGGAGAGCAGCAGGCTTGGTTT 204
Query 517 GGTTTCGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGGACAT 590
|||||.||||||||.|||||.|||.||||||||||||||.|..|.|||||..|.|||||.||.||||||||.||
Sbjct 205 GGTTTTGCTGGCACCCCAGGTTACTTGTCCCCTGAGGTCTTGAGGAAAGATCCCTATGGAAAACCTGTGGATAT 278
Query 591 CTGGGCATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCACAAGC 664
||||||.||.|||||.||||||||.|||||.||.||||||||.||.|||||||||||.|||||.||||||||||
Sbjct 279 CTGGGCCTGCGGGGTCATCCTGTATATCCTCCTGGTGGGCTATCCTCCCTTCTGGGATGAGGATCAGCACAAGC 352
Query 665 TGTACCAGCAGATCAAGGCTGGTGCCTATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGCCAAA 738
||||.|||||||||||||||||.||||||||.|||||.||.||.||.||||||||.||.||||||||||||||.
Sbjct 353 TGTATCAGCAGATCAAGGCTGGAGCCTATGATTTCCCATCACCAGAATGGGACACGGTAACTCCTGAAGCCAAG 426
Query 739 AACCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGCCCATGAGGCCCTGAAGCACCCGTG 812
|||.|.||||||||||||||||||||.|||||.||.|||||||||||.||..|..||||.||.|||||||||||
Sbjct 427 AACTTGATCAACCAGATGCTGACCATAAACCCAGCAAAGCGCATCACGGCTGACCAGGCTCTCAAGCACCCGTG 500
Query 813 GGTCTGCCAACGCTCCACGGTAGCATCCATGATGCACAGACAGGAGACTGTGGAGTGTCTGAAAAAGTTCAATG 886
||||||.|||||.||||||||.||||||||||||||..|.||||||||||||||||||.||...||||||||||
Sbjct 501 GGTCTGTCAACGATCCACGGTGGCATCCATGATGCATCGTCAGGAGACTGTGGAGTGTTTGCGCAAGTTCAATG 574
Query 887 CCAGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCTCAGCAGCCAAGAGTTTA 960
||.|||||||.||.|||||.|||||||||||.||||||||.|.|.|..||||.||||||||.|||||.||..||
Sbjct 575 CCCGGAGAAAACTGAAGGGTGCCATCCTCACGACCATGCTTGTCTCCAGGAACTTCTCAGCTGCCAAAAGCCTA 648
Query 961 CTCAACAAGAAAGCAGAT---GGAGTCA---AGCCCCAGACGA---------------------ATAGCACCAA 1007
.|.||||||||..|.||| ||.|||| ||||.||.||.| ||.|.|.|||
Sbjct 649 TTGAACAAGAAGTCGGATGGCGGTGTCAAGGAGCCACAAACCACTGTGGTACACAACGCTACAGATGGGATCAA 722
Query 1008 -----AAACAGTGCAGCCGC--CACCAGCCCCA-AAG----GGAC------GCTTCCTC-CTGCCGCCCTGG-- 1060
..||||.| |||.|| ||||| ||.|| ||| |||| |||.||.| || ||||.||||
Sbjct 723 GGGCTCCACAGAG-AGCTGCAACACCA-CCACAGAAGATGAGGACCTCAAAGCTGCCCCGCT-CCGCACTGGGA 793
Query 1061 -----AGTCTTCTGACAGTGCC------------------------AATACCACCAT----AGAGGATGAAGAC 1101
|| || |.||||| ||.|.|.||.| || |.|||.||.|
Sbjct 794 ATGGCAG-CT-----CGGTGCCTGAAGGACGGAGCTCCCGGGACAGAACAGCCCCCTCTGCAG-GCATGCAGCC 860
Query 1102 GCTAAAGCC----------------------CGGAAGCAGGAGATCATTAAGACCACGGAGCAGCTCATCGAGG 1153
.| |||| ||.||.||||||||||||||||..||.||.|||||.||.||.|
Sbjct 861 CC---AGCCTTCTCTCTGCTCCTCAGCCATGCGAAAACAGGAGATCATTAAGATTACAGAACAGCTGATTGAAG 931
Query 1154 CCGTCAACAACGGTGACTTTGAGGCCTACGCGAAAATCTGTGACCCAGGGCTGACCTCGTTTGAGCCTGAAGCA 1227
||.|||||||.||.|||||||||||||||.||||.||.|||||.|||||.||.||.||.|||||||||||.||.
Sbjct 932 CCATCAACAATGGGGACTTTGAGGCCTACACGAAGATTTGTGATCCAGGCCTCACTTCCTTTGAGCCTGAGGCC 1005
Query 1228 CTGGGCAACCTGGTTGAAGGGATGGACTTCCACAGATTCTACTTCGAGAACCTGCTGGCCAAGAACAGCAAGCC 1301
||.||.|||||.||.||.||||||||.|||||.|..||.|||||.|||||.||.|||.||||||||||||||||
Sbjct 1006 CTTGGTAACCTCGTGGAGGGGATGGATTTCCATAAGTTTTACTTTGAGAATCTCCTGTCCAAGAACAGCAAGCC 1079
Query 1302 GATCCACACGACCATCCTGAACCCACACGTGCACGTCATTGGAGAGGATGCCGCCTGCATCGCTTACATCCGGC 1375
.|||||.||.||||||||.|||||||||||.|||||.|||||.|||||.||.||.||||||||.||||||||.|
Sbjct 1080 TATCCATACCACCATCCTAAACCCACACGTCCACGTGATTGGGGAGGACGCAGCGTGCATCGCCTACATCCGCC 1153
Query 1376 TCACGCAGTACATTGACGGGCAGGGCCGGCCCCGCACCAGCCAGTCTGAGGAGACCCGCGTGTGGCACCGCCGC 1449
||||.||||||||.|||||||||||.|||||.||||||||||||||.||.||||||||.||.||||||||.||.
Sbjct 1154 TCACCCAGTACATCGACGGGCAGGGTCGGCCTCGCACCAGCCAGTCAGAAGAGACCCGGGTCTGGCACCGTCGG 1227
Query 1450 GACGGCAAGTGGCAGAACGTGCACTTCCACTGCTCGGGCGCGCCTGTGGCCCCGCTGCAG 1509
||.||||||||||..||.||.||||..||||||||.||.||.||||..||.|||||||||
Sbjct 1228 GATGGCAAGTGGCTCAATGTCCACTATCACTGCTCAGGGGCCCCTGCCGCACCGCTGCAG 1287