Nucleotide Global Alignment
Description
- Query:
- TRCN0000480225
- Subject:
- XM_006518489.2
- Aligned Length:
- 1754
- Identities:
- 1216
- Gaps:
- 268
Alignment
Query 1 ATGGCCACCACGGTGACCTGCACCCGCTTCACCGACGAGTACCAGCTCTACGAGGATATTGGCAAGGGGGCTTT 74
|||||||||||.|..|||||||||||||||||||||||.||||||||.|.||||||..|.||||||||.||.||
Sbjct 1 ATGGCCACCACCGCCACCTGCACCCGCTTCACCGACGACTACCAGCTTTTCGAGGAGCTCGGCAAGGGTGCCTT 74
Query 75 CTCTGTGGTCCGACGCTGTGTCAAG-----CTCTGCACCGGCCATGAGTATGCAGCCAAGATCATCAACACCAA 143
|||.||||||||..|.|||||.||| .|||.| .||.||.|||||.||.||.||||||||.|||||
Sbjct 75 CTCAGTGGTCCGGAGGTGTGTAAAGAAAACATCTAC-----GCAGGAATATGCTGCAAAAATCATCAATACCAA 143
Query 144 GAAGCTGTCAGCCAGAGATCACCAGAAGCTGGAGAGAGAGGCTCGGATCTGCCGCCTTCTGAAGCATTCCAACA 217
||||.||||.|||.|||||||.|||||.||.||..|||||||.|||||.|||||.||||||||.|||.|.||||
Sbjct 144 GAAGTTGTCCGCCCGAGATCATCAGAAACTAGAACGAGAGGCCCGGATATGCCGACTTCTGAAACATCCAAACA 217
Query 218 TCGTGCGTCTCCACGACAGCATCTCCGAGGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAG 291
|.|||||||||||.|||||.||.||.||.||.||.||.||||||||.||.||.||.||.||.||.||.||||||
Sbjct 218 TTGTGCGTCTCCATGACAGTATTTCTGAAGAAGGGTTTCACTACCTCGTGTTTGACCTTGTTACCGGAGGGGAG 291
Query 292 CTCTTTGAAGACATTGTGGCGAGAGAGTACTACAGCGAGGCTGATGCCAGTCACTGTATCCAGCAGATCCTGGA 365
.|.|||||||||||||||||.||||||||||||||.||.|||||||||||.||||||||.||.|||||||||||
Sbjct 292 TTGTTTGAAGACATTGTGGCCAGAGAGTACTACAGTGAAGCTGATGCCAGCCACTGTATACATCAGATCCTGGA 365
Query 366 GGCCGTTCTCCATTGTCACCA-AATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGC 438
|...|||..|||....||||| .|| |...||||||||.|.||.||.|||||.||||||.||||.|||||.||.
Sbjct 366 GAGTGTTAACCACATCCACCAGCAT-GACATCGTCCACCGGGATCTGAAGCCTGAGAACTTGCTGCTGGCGAGT 438
Query 439 AAGTGCAAAGGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATG 512
||.|||||.||.|||||.||.|||||.||.||.||.|||||.||.|||||.||.|||||.||.||||||||.||
Sbjct 439 AAATGCAAGGGTGCTGCGGTCAAGCTAGCTGATTTTGGCCTGGCCATCGAAGTACAGGGAGAGCAGCAGGCTTG 512
Query 513 GTTTGGTTTCGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGG 586
|||||||||.||.|||||.|||||.|||.||||||||||||||.|..|.|||||..|.|||||.||.|||||||
Sbjct 513 GTTTGGTTTTGCCGGCACCCCAGGTTACTTGTCCCCTGAGGTCTTGAGGAAAGATCCCTATGGAAAACCTGTGG 586
Query 587 ACATCTGGGCATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCAC 660
||||||||||.||.|||||.||||||||.|||||.||.|||||||||||.|||||||||||.|||||.||||||
Sbjct 587 ACATCTGGGCCTGCGGGGTCATCCTGTATATCCTCCTGGTGGGCTACCCTCCCTTCTGGGATGAGGATCAGCAC 660
Query 661 AAGCTGTACCAGCAGATCAAGGCTGGTGCCTATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGC 734
||||||||.|||||||||||.|||||.|||||.||.|||||.||.||.||.||||||||.||||||||||||||
Sbjct 661 AAGCTGTATCAGCAGATCAAAGCTGGAGCCTACGATTTCCCATCACCAGAATGGGACACAGTCACTCCTGAAGC 734
Query 735 CAAAAACCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGCCCATGAGGCCCTGAAGCACC 808
.||.|||.|.||||||||||||||||||||.||||||||.|||||||||||.|||.|..||||.||.|||||||
Sbjct 735 TAAGAACTTGATCAACCAGATGCTGACCATAAACCCTGCAAAGCGCATCACGGCCGACCAGGCTCTCAAGCACC 808
Query 809 CGTGGGTCTGCCAACGCTCCACGGTAGCATCCATGATGCACAGACAGGAGACTGTGGAGTGTCT---GAAAAAG 879
|.||||||||.|||||.||.|||||.||||||||||||||..|.||.|||||.||.||||| || |.|||
Sbjct 809 CATGGGTCTGTCAACGGTCTACGGTGGCATCCATGATGCATCGCCAAGAGACGGTAGAGTG-CTTACGCAAA-- 879
Query 880 TTCAATGCCAGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCTC--------- 944
|||||.|||.|||||||.||.|||||.|||||||||||.||||||||.|.|.|..||||.||.||
Sbjct 880 TTCAACGCCCGGAGAAAACTGAAGGGTGCCATCCTCACAACCATGCTTGTCTCCAGGAACTTTTCAGTTGGCAG 953
Query 945 ------------------------------------------------------AGCAGCCAAGAGTTTACTCA 964
|||.|||||.||..||.|.|
Sbjct 954 GCAGAGCTCCGCCCCCGCCTCGCCTGCCGCGAGCGCCGCCGGCCTGGCCGGGCAAGCTGCCAAAAGCCTATTGA 1027
Query 965 ACAAGAAAGCAGAT---GGAGTCAAGCCCCAGACGAATAGCACCAAAAACAGTGC-----AGCCGCCACCAGCC 1030
|||||||..||||| ||.||||||||.||||..|| ||.|||||||||| | ||| ||||||
Sbjct 1028 ACAAGAAGTCAGATGGCGGTGTCAAGCCACAGAGCAA---CAACAAAAACAGT-CTCGTAAGC-----CCAGCC 1092
Query 1031 CCAAAGGGAC-GCTTCCTCCTG----CCGCCCTGGA-------------GT-----------CTTCTG------ 1069
| |||.|.| ||..||| || |.|||.|||| || ||.|.|
Sbjct 1093 C--AAGAGCCTGCGCCCT--TGCAGACGGCCATGGAACCACAAACCACCGTGGTACATAATGCTACAGATGGGA 1162
Query 1070 -----------ACAG-----TGCCAATACCACCATAGAGGATGAAGA-------------------CG------ 1102
|||| || .||.|||||.|.|||.||.||||| ||
Sbjct 1163 TCAAGGGCTCCACAGAGAGCTG-TAACACCACTACAGAAGACGAAGATCTCAAAGCTGCCCCACTCCGCACTGG 1235
Query 1103 -----------------CTAAAG---------CCCGG------------------------------------- 1113
||.||| |||||
Sbjct 1236 GAATGGCAGCTTGGTGCCTGAAGGACGGAGCCCCCGGGACAGAACAGCCCCCTCTGCAGGCATGCAGCCCCAGC 1309
Query 1114 --------------------------AAGCAGGAGATCATTAAGACCACGGAGCAGCTCATCGAGGCCGTCAAC 1161
||.||.||.||||||||||.|||.||.||.||.|||||.|||.|||||
Sbjct 1310 CTTCTCTCTGCTCCTCAGCCATGAGAAAACAAGAAATCATTAAGATCACAGAACAACTGATCGAAGCCATCAAC 1383
Query 1162 AACGGTGACTTTGAGGCCTACGCGAAAATCTGTGACCCAGGGCTGACCTCGTTTGAGCCTGAAGCACTGGGCAA 1235
||.||.|||||||||||||||.||||.||.||||||||.||.||.||.||.||||||||.|||||.||.||.||
Sbjct 1384 AATGGGGACTTTGAGGCCTACACGAAGATTTGTGACCCGGGCCTCACATCCTTTGAGCCAGAAGCCCTTGGTAA 1457
Query 1236 CCTGGTTGAAGGGATGGACTTCCACAGATTCTACTTCGAGAACCTGCTGGCCAAGAACAGCAAGCCGATCCACA 1309
|||.||.|||||.|||||.|||||.|..||.|||||.|||||.||.|||.||||||||||||||||.|||||||
Sbjct 1458 CCTCGTGGAAGGAATGGATTTCCATAAGTTTTACTTTGAGAATCTCCTGTCCAAGAACAGCAAGCCTATCCACA 1531
Query 1310 CGACCATCCTGAACCCACACGTGCACGTCATTGGAGAGGATGCCGCCTGCATCGCTTACATCCGGCTCACGCAG 1383
|.||||||||.|||||.|||||.|||||.|||||.|||||.||.||.||||||||.||.|||||||||||.|||
Sbjct 1532 CCACCATCCTAAACCCTCACGTCCACGTGATTGGGGAGGACGCAGCTTGCATCGCCTATATCCGGCTCACTCAG 1605
Query 1384 TACATTGACGGGCAGGGCCGGCCCCGCACCAGCCAGTCTGAGGAGACCCGCGTGTGGCACCGCCGCGACGGCAA 1457
|||||.|||||||||||.|||||.||||||||.|||||.|||||||||||.||||||||||||||.||.|||||
Sbjct 1606 TACATCGACGGGCAGGGTCGGCCTCGCACCAGTCAGTCAGAGGAGACCCGGGTGTGGCACCGCCGGGATGGCAA 1679
Query 1458 GTGGCAGAACGTGCACTTCCACTGCTCGGGCGCGCCTGTGGCCCCGCTGCAG 1509
|||||..||.||.||||..||||||||.||.||.||||..||.|||||.|||
Sbjct 1680 GTGGCTCAATGTCCACTATCACTGCTCAGGGGCCCCTGCCGCACCGCTACAG 1731
