Nucleotide Global Alignment

Description

• Query: TRCN0000480225
• Subject: XM_006518492.2
• Aligned Length: 1691
• Identities: 1216
• Gaps: 205

Alignment

Query    1  ATGGCCACCACGGTGACCTGCACCCGCTTCACCGACGAGTACCAGCTCTACGAGGATATTGGCAAGGGGGCTTT  74
            |||||||||||.|..|||||||||||||||||||||||.||||||||.|.||||||..|.||||||||.||.||
Sbjct    1  ATGGCCACCACCGCCACCTGCACCCGCTTCACCGACGACTACCAGCTTTTCGAGGAGCTCGGCAAGGGTGCCTT  74

Query   75  CTCTGTGGTCCGACGCTGTGTCAAG-----CTCTGCACCGGCCATGAGTATGCAGCCAAGATCATCAACACCAA  143
            |||.||||||||..|.|||||.|||     .|||.|     .||.||.|||||.||.||.||||||||.|||||
Sbjct   75  CTCAGTGGTCCGGAGGTGTGTAAAGAAAACATCTAC-----GCAGGAATATGCTGCAAAAATCATCAATACCAA  143

Query  144  GAAGCTGTCAGCCAGAGATCACCAGAAGCTGGAGAGAGAGGCTCGGATCTGCCGCCTTCTGAAGCATTCCAACA  217
            ||||.||||.|||.|||||||.|||||.||.||..|||||||.|||||.|||||.||||||||.|||.|.||||
Sbjct  144  GAAGTTGTCCGCCCGAGATCATCAGAAACTAGAACGAGAGGCCCGGATATGCCGACTTCTGAAACATCCAAACA  217

Query  218  TCGTGCGTCTCCACGACAGCATCTCCGAGGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAG  291
            |.|||||||||||.|||||.||.||.||.||.||.||.||||||||.||.||.||.||.||.||.||.||||||
Sbjct  218  TTGTGCGTCTCCATGACAGTATTTCTGAAGAAGGGTTTCACTACCTCGTGTTTGACCTTGTTACCGGAGGGGAG  291

Query  292  CTCTTTGAAGACATTGTGGCGAGAGAGTACTACAGCGAGGCTGATGCCAGTCACTGTATCCAGCAGATCCTGGA  365
            .|.|||||||||||||||||.||||||||||||||.||.|||||||||||.||||||||.||.|||||||||||
Sbjct  292  TTGTTTGAAGACATTGTGGCCAGAGAGTACTACAGTGAAGCTGATGCCAGCCACTGTATACATCAGATCCTGGA  365

Query  366  GGCCGTTCTCCATTGTCACCA-AATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGC  438
            |...|||..|||....||||| .|| |...||||||||.|.||.||.|||||.||||||.||||.|||||.||.
Sbjct  366  GAGTGTTAACCACATCCACCAGCAT-GACATCGTCCACCGGGATCTGAAGCCTGAGAACTTGCTGCTGGCGAGT  438

Query  439  AAGTGCAAAGGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATG  512
            ||.|||||.||.|||||.||.|||||.||.||.||.|||||.||.|||||.||.|||||.||.||||||||.||
Sbjct  439  AAATGCAAGGGTGCTGCGGTCAAGCTAGCTGATTTTGGCCTGGCCATCGAAGTACAGGGAGAGCAGCAGGCTTG  512

Query  513  GTTTGGTTTCGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGG  586
            |||||||||.||.|||||.|||||.|||.||||||||||||||.|..|.|||||..|.|||||.||.|||||||
Sbjct  513  GTTTGGTTTTGCCGGCACCCCAGGTTACTTGTCCCCTGAGGTCTTGAGGAAAGATCCCTATGGAAAACCTGTGG  586

Query  587  ACATCTGGGCATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCAC  660
            ||||||||||.||.|||||.||||||||.|||||.||.|||||||||||.|||||||||||.|||||.||||||
Sbjct  587  ACATCTGGGCCTGCGGGGTCATCCTGTATATCCTCCTGGTGGGCTACCCTCCCTTCTGGGATGAGGATCAGCAC  660

Query  661  AAGCTGTACCAGCAGATCAAGGCTGGTGCCTATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGC  734
            ||||||||.|||||||||||.|||||.|||||.||.|||||.||.||.||.||||||||.||||||||||||||
Sbjct  661  AAGCTGTATCAGCAGATCAAAGCTGGAGCCTACGATTTCCCATCACCAGAATGGGACACAGTCACTCCTGAAGC  734

Query  735  CAAAAACCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGCCCATGAGGCCCTGAAGCACC  808
            .||.|||.|.||||||||||||||||||||.||||||||.|||||||||||.|||.|..||||.||.|||||||
Sbjct  735  TAAGAACTTGATCAACCAGATGCTGACCATAAACCCTGCAAAGCGCATCACGGCCGACCAGGCTCTCAAGCACC  808

Query  809  CGTGGGTCTGCCAACGCTCCACGGTAGCATCCATGATGCACAGACAGGAGACTGTGGAGTGTCT---GAAAAAG  879
            |.||||||||.|||||.||.|||||.||||||||||||||..|.||.|||||.||.||||| ||   |.|||  
Sbjct  809  CATGGGTCTGTCAACGGTCTACGGTGGCATCCATGATGCATCGCCAAGAGACGGTAGAGTG-CTTACGCAAA--  879

Query  880  TTCAATGCCAGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCTCAGCAGCCAA  953
            |||||.|||.|||||||.||.|||||.|||||||||||.||||||||.|.|.|..||||.||.|||||.|||||
Sbjct  880  TTCAACGCCCGGAGAAAACTGAAGGGTGCCATCCTCACAACCATGCTTGTCTCCAGGAACTTTTCAGCTGCCAA  953

Query  954  GAGTTTACTCAACAAGAAAGCAGAT---GGAGTCAAGCCCCAGACGAATAGCACCAAAAACAGTGC-----AGC  1019
            .||..||.|.||||||||..|||||   ||.||||||||.||||..||   ||.|||||||||| |     |||
Sbjct  954  AAGCCTATTGAACAAGAAGTCAGATGGCGGTGTCAAGCCACAGAGCAA---CAACAAAAACAGT-CTCGTAAGC  1023

Query 1020  CGCCACCAGCCCCAAAGGGAC-GCTTCCTCCTG----CCGCCCTGGA-------------GT-----------C  1064
                 |||||||  |||.|.| ||..|||  ||    |.|||.||||             ||           |
Sbjct 1024  -----CCAGCCC--AAGAGCCTGCGCCCT--TGCAGACGGCCATGGAACCACAAACCACCGTGGTACATAATGC  1088

Query 1065  TTCTG-----------------ACAG-----TGCCAATACCACCATAGAGGATGAAGA----------------  1100
            |.|.|                 ||||     || .||.|||||.|.|||.||.|||||                
Sbjct 1089  TACAGATGGGATCAAGGGCTCCACAGAGAGCTG-TAACACCACTACAGAAGACGAAGATCTCAAAGCTGCCCCA  1161

Query 1101  ---CG-----------------------CTAAAG---------CCCGG--------------------------  1113
               ||                       ||.|||         |||||                          
Sbjct 1162  CTCCGCACTGGGAATGGCAGCTTGGTGCCTGAAGGACGGAGCCCCCGGGACAGAACAGCCCCCTCTGCAGGCAT  1235

Query 1114  -------------------------------------AAGCAGGAGATCATTAAGACCACGGAGCAGCTCATCG  1150
                                                 ||.||.||.||||||||||.|||.||.||.||.||||
Sbjct 1236  GCAGCCCCAGCCTTCTCTCTGCTCCTCAGCCATGAGAAAACAAGAAATCATTAAGATCACAGAACAACTGATCG  1309

Query 1151  AGGCCGTCAACAACGGTGACTTTGAGGCCTACGCGAAAATCTGTGACCCAGGGCTGACCTCGTTTGAGCCTGAA  1224
            |.|||.|||||||.||.|||||||||||||||.||||.||.||||||||.||.||.||.||.||||||||.|||
Sbjct 1310  AAGCCATCAACAATGGGGACTTTGAGGCCTACACGAAGATTTGTGACCCGGGCCTCACATCCTTTGAGCCAGAA  1383

Query 1225  GCACTGGGCAACCTGGTTGAAGGGATGGACTTCCACAGATTCTACTTCGAGAACCTGCTGGCCAAGAACAGCAA  1298
            ||.||.||.|||||.||.|||||.|||||.|||||.|..||.|||||.|||||.||.|||.|||||||||||||
Sbjct 1384  GCCCTTGGTAACCTCGTGGAAGGAATGGATTTCCATAAGTTTTACTTTGAGAATCTCCTGTCCAAGAACAGCAA  1457

Query 1299  GCCGATCCACACGACCATCCTGAACCCACACGTGCACGTCATTGGAGAGGATGCCGCCTGCATCGCTTACATCC  1372
            |||.||||||||.||||||||.|||||.|||||.|||||.|||||.|||||.||.||.||||||||.||.||||
Sbjct 1458  GCCTATCCACACCACCATCCTAAACCCTCACGTCCACGTGATTGGGGAGGACGCAGCTTGCATCGCCTATATCC  1531

Query 1373  GGCTCACGCAGTACATTGACGGGCAGGGCCGGCCCCGCACCAGCCAGTCTGAGGAGACCCGCGTGTGGCACCGC  1446
            |||||||.||||||||.|||||||||||.|||||.||||||||.|||||.|||||||||||.||||||||||||
Sbjct 1532  GGCTCACTCAGTACATCGACGGGCAGGGTCGGCCTCGCACCAGTCAGTCAGAGGAGACCCGGGTGTGGCACCGC  1605

Query 1447  CGCGACGGCAAGTGGCAGAACGTGCACTTCCACTGCTCGGGCGCGCCTGTGGCCCCGCTGCAG  1509
            ||.||.||||||||||..||.||.||||..||||||||.||.||.||||..||.|||||.|||
Sbjct 1606  CGGGATGGCAAGTGGCTCAATGTCCACTATCACTGCTCAGGGGCCCCTGCCGCACCGCTACAG  1668