Nucleotide Global Alignment
Description
- Query:
- TRCN0000480225
- Subject:
- XM_017012663.2
- Aligned Length:
- 2060
- Identities:
- 1107
- Gaps:
- 943
Alignment
Query 1 ATGGCCACCACGGTGACCTGCACCCGCTTCACCGACGAGTACCAGCTCTACGAGGATATTGGCAAGGGGGCTTT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CTCTGTGGTCCGACGCTGTGTCAAGCTCTGCACCGGCCATGAGTATGCAGCCAAGATCATCAACACCAAGAAGC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TGTCAGCCAGAGATCACCAGAAGCTGGAGAGAGAGGCTCGGATCTGCCGCCTTCTGAAGCATTCCAACATCGTG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CGTCTCCACGACAGCATCTCCGAGGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAGCTCTT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 TGAAGACATTGTGGCGAGAGAGTACTACAGCGAGGCTGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGCCG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 TTCTCCATTGTCACCAAATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGCAAGTGC 444
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 -----------------ATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGCAAGTGC 57
Query 445 AAAGGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATGGTTTGG 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 58 AAAGGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATGGTTTGG 131
Query 519 TTTCGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGGACATCT 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 132 TTTCGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGGACATCT 205
Query 593 GGGCATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCACAAGCTG 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 206 GGGCATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCACAAGCTG 279
Query 667 TACCAGCAGATCAAGGCTGGTGCCTATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGCCAAAAA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 280 TACCAGCAGATCAAGGCTGGTGCCTATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGCCAAAAA 353
Query 741 CCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGCCCATGAGGCCCTGAAGCACCCGTGGG 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 354 CCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGCCCATGAGGCCCTGAAGCACCCGTGGG 427
Query 815 TCTGCCAACGCTCCACGGTAGCATCCATGATGCACAGACAGGAGACTGTGGAGTGTCTGAAAAAGTTCAATGCC 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 428 TCTGCCAACGCTCCACGGTAGCATCCATGATGCACAGACAGGAGACTGTGGAGTGTCTGAAAAAGTTCAATGCC 501
Query 889 AGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCTCAG---------------- 946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 502 AGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCTCAGTGGGCAGACAGACCAC 575
Query 947 --------------------------------------------------------CAGCCAAGAGTTTACTCA 964
.|||||||||||||||||
Sbjct 576 CGCTCCGGCCACAATGTCCACCGCGGCCTCCGGCACCACCATGGGGCTGGTGGAACAAGCCAAGAGTTTACTCA 649
Query 965 ACAAGAAAGCAGATGGAGTCA---AGCCCCA-------------------------GACG-------------- 996
||||||||||||||||||||| ||||.|| ||||
Sbjct 650 ACAAGAAAGCAGATGGAGTCAAGGAGCCTCAAACCACCGTCATCCATAACCCAGTGGACGGGATTAAGGAGTCT 723
Query 997 ------------AATAGCACCAAAAA--------------------------------------------CAGT 1014
||||.|||||.|.| ||||
Sbjct 724 TCTGACAGTGCCAATACCACCATAGAGGATGAAGACGCTAAAGCCCCCAGGGTCCCCGACATCCTGAGCTCAGT 797
Query 1015 ----------------------GCAGCCG-----------------CCA------------------------C 1025
|.||||| ||| |
Sbjct 798 GAGGAGGGGCTCGGGAGCCCCAGAAGCCGAGGGGCCCCTGCCCTGCCCATCTCCGGCTCCCTTTAGCCCCCTGC 871
Query 1026 CAGCCCCA-----------------------------------AAGGG--------AC---------------- 1040
|||||||| ||||| ||
Sbjct 872 CAGCCCCATCCCCCAGGATCTCTGACATCCTGAACTCTGTGAGAAGGGGTTCAGGAACCCCAGAAGCCGAGGGC 945
Query 1041 ------------------------------------GCT-TCCT------CCTG------CCG---CCCTGGAG 1062
||| |||| |||| ||| |||.|||
Sbjct 946 CCCCTCTCAGCGGGGCCCCCGCCCTGCCTGTCTCCGGCTCTCCTAGGCCCCCTGTCCTCCCCGTCCCCCAGGA- 1018
Query 1063 TCTTCTGACA---------------------------------------------------------------- 1072
|| |||||||
Sbjct 1019 TC-TCTGACATCCTGAACTCTGTGAGGAGGGGCTCAGGGACCCCAGAAGCCGAGGGCCCCTCGCCAGTGGGGCC 1091
Query 1073 ------GTGCCAAT--------------------------ACCACCATAGA-GGATGA---------------- 1097
.||||.|| ||| ||||.|| ||||||
Sbjct 1092 CCCGCCCTGCCCATCTCCGACTATCCCTGGCCCCCTGCCCACC-CCATGGATGGATGACATCCCAGGGCTGCTG 1164
Query 1098 ------------------AGAC---------------------------------------------------- 1101
||||
Sbjct 1165 CCACCCCCACCTGTGGGGAGACACCAGACTGGGGGTGGTGTGGAGATACTCTTAGAGAAGAGGCTGCTGGGCCA 1238
Query 1102 ------------------------GCTAAAGCCCGGAAGCAGGAGATCATTAAGACCACGGAGCAGCTCATCGA 1151
||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1239 CGGGCTCGGCATGGCAGGGCAGTGGCT--AGCCCGGAAGCAGGAGATCATTAAGACCACGGAGCAGCTCATCGA 1310
Query 1152 GGCCGTCAACAACGGTGACTTTGAGGCCTACGCGAAAATCTGTGACCCAGGGCTGACCTCGTTTGAGCCTGAAG 1225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1311 GGCCGTCAACAACGGTGACTTTGAGGCCTACGCGAAAATCTGTGACCCAGGGCTGACCTCGTTTGAGCCTGAAG 1384
Query 1226 CACTGGGCAACCTGGTTGAAGGGATGGACTTCCACAGATTCTACTTCGAGAACCTGCTGGCCAAGAACAGCAAG 1299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1385 CACTGGGCAACCTGGTTGAAGGGATGGACTTCCACAGATTCTACTTCGAGAACCTGCTGGCCAAGAACAGCAAG 1458
Query 1300 CCGATCCACACGACCATCCTGAACCCACACGTGCACGTCATTGGAGAGGATGCCGCCTGCATCGCTTACATCCG 1373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1459 CCGATCCACACGACCATCCTGAACCCACACGTGCACGTCATTGGAGAGGATGCCGCCTGCATCGCTTACATCCG 1532
Query 1374 GCTCACGCAGTACATTGACGGGCAGGGCCGGCCCCGCACCAGCCAGTCTGAGGAGACCCGCGTGTGGCACCGCC 1447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1533 GCTCACGCAGTACATTGACGGGCAGGGCCGGCCCCGCACCAGCCAGTCTGAGGAGACCCGCGTGTGGCACCGCC 1606
Query 1448 GCGACGGCAAGTGGCAGAACGTGCACTTCCACTGCTCGGGCGCGCCTGTGGCCCCGCTGCAG 1509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1607 GCGACGGCAAGTGGCAGAACGTGCACTTCCACTGCTCGGGCGCGCCTGTGGCCCCGCTGCAG 1668
