Nucleotide Global Alignment
Description
- Query:
- TRCN0000480225
- Subject:
- XM_024448219.1
- Aligned Length:
- 1570
- Identities:
- 1027
- Gaps:
- 323
Alignment
Query 1 ATGGCCACCACGGTGACCTGCACCCGCTTCACCGACGAGTACCAGCTCTACGAGGATATTGGCAAGGGGGCTTT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CTCTGTGGTCCGACGCTGTGTCAAGCTCTGCACCGGCCATGAGTATGCAGCCAAGATCATCAACACCAAGAAGC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TGTCAGCCAGAGATCACCAGAAGCTGGAGAGAGAGGCTCGGATCTGCCGCCTTCTGAAGCATTCCAACATCGTG 222
.||.||.||||||||.|||.|.||||||||
Sbjct 1 -------------------------------------------ATGTCGACTTCTGAAACATCCAAACATCGT- 30
Query 223 CGTCTCCACGACAGCATCTCCGAGGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAGCTCTT 296
||.||.||.||||||||.||
Sbjct 31 ------------------------------------------------------GTTACCGGCGGGGAGCTGTT 50
Query 297 TGAAGACATTGTGGCGAGAGAGTACTACAGCGAGGCTGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGCCG 370
|||||||||||||||.||||||||||||||.||.||.||||||||.||||||||.||.|||||.||||||...|
Sbjct 51 TGAAGACATTGTGGCCAGAGAGTACTACAGTGAAGCAGATGCCAGCCACTGTATACATCAGATTCTGGAGAGTG 124
Query 371 TTCTCCATTGTCACCA-AATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGCAAGTG 443
||..|||....||||| .|| |...||||||||||.|||||.|||||.|||||||||||.|||||.||.||.||
Sbjct 125 TTAACCACATCCACCAGCAT-GACATCGTCCACAGGGACCTGAAGCCTGAGAACCTGCTGCTGGCGAGTAAATG 197
Query 444 CAAAGGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATGGTTTG 517
|||.||.||.||.||.||||||||.||.||.||||||||.|||||.||.|||||.||.||||||||.|||||||
Sbjct 198 CAAGGGTGCCGCCGTCAAGCTGGCTGATTTTGGCCTAGCCATCGAAGTACAGGGAGAGCAGCAGGCTTGGTTTG 271
Query 518 GTTTCGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGGACATC 591
||||.||||||||.|||||.|||.||||||||||||||.|..|.|||||..|.|||||.||.||||||||.|||
Sbjct 272 GTTTTGCTGGCACCCCAGGTTACTTGTCCCCTGAGGTCTTGAGGAAAGATCCCTATGGAAAACCTGTGGATATC 345
Query 592 TGGGCATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCACAAGCT 665
|||||.||.|||||.||||||||.|||||.||.||||||||.||.|||||||||||.|||||.|||||||||||
Sbjct 346 TGGGCCTGCGGGGTCATCCTGTATATCCTCCTGGTGGGCTATCCTCCCTTCTGGGATGAGGATCAGCACAAGCT 419
Query 666 GTACCAGCAGATCAAGGCTGGTGCCTATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGCCAAAA 739
|||.|||||||||||||||||.||||||||.|||||.||.||.||.||||||||.||.||||||||||||||.|
Sbjct 420 GTATCAGCAGATCAAGGCTGGAGCCTATGATTTCCCATCACCAGAATGGGACACGGTAACTCCTGAAGCCAAGA 493
Query 740 ACCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGCCCATGAGGCCCTGAAGCACCCGTGG 813
||.|.||||||||||||||||||||.|||||.||.|||||||||||.||..|..||||.||.||||||||||||
Sbjct 494 ACTTGATCAACCAGATGCTGACCATAAACCCAGCAAAGCGCATCACGGCTGACCAGGCTCTCAAGCACCCGTGG 567
Query 814 GTCTGCCAACGCTCCACGGTAGCATCCATGATGCACAGACAGGAGACTGTGGAGTGTCTGAAAAAGTTCAATGC 887
|||||.|||||.||||||||.||||||||||||||..|.||||||||||||||||||.||...|||||||||||
Sbjct 568 GTCTGTCAACGATCCACGGTGGCATCCATGATGCATCGTCAGGAGACTGTGGAGTGTTTGCGCAAGTTCAATGC 641
Query 888 CAGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCTCAGCAGCCAAGAGTTTAC 961
|.|||||||.||.|||||.|||||||||||.||||||||.|.|.|..||||.||||||||.|||||.||..||.
Sbjct 642 CCGGAGAAAACTGAAGGGTGCCATCCTCACGACCATGCTTGTCTCCAGGAACTTCTCAGCTGCCAAAAGCCTAT 715
Query 962 TCAACAAGAAAGCAGAT---GGAGTCAAGCCCCAGACGAATAGCACCAAAAACAGTGC-----AGCCGCCACCA 1027
|.||||||||..|.||| ||.||||||||.||||..|| ||.|||||||||| | ||| |||
Sbjct 716 TGAACAAGAAGTCGGATGGCGGTGTCAAGCCACAGAGCAA---CAACAAAAACAGT-CTCGTAAGC-----CCA 780
Query 1028 GCCCCAAAG-GGACGCTTCCTCCTG----CCGCCCTGGAG---------------------------------- 1062
|||| ||| |..|||..||| || |.|||.|||||
Sbjct 781 GCCC--AAGAGCCCGCGCCCT--TGCAGACGGCCATGGAGCCACAAACCACTGTGGTACACAACGCTACAGATG 850
Query 1063 -----------TCTTCTGACAG-TGCCAATACCACCATAGAGGATGAAGACGCT-AAAGCCCGGAAGCAGGAGA 1123
||..|.||.|| || |||.|||||||.|||.|||||.||| || ||||..||.||.|||||||
Sbjct 851 GGATCAAGGGCTCCACAGAGAGCTG-CAACACCACCACAGAAGATGAGGAC-CTCAAAGTGCGAAAACAGGAGA 922
Query 1124 TCATTAAGACCACGGAGCAGCTCATCGAGGCCGTCAACAACGGTGACTTTGAGGCCTACGCGAAAATCTGTGAC 1197
|||||||||..||.||.|||||.||.||.|||.|||||||.||.|||||||||||||||.||||.||.|||||.
Sbjct 923 TCATTAAGATTACAGAACAGCTGATTGAAGCCATCAACAATGGGGACTTTGAGGCCTACACGAAGATTTGTGAT 996
Query 1198 CCAGGGCTGACCTCGTTTGAGCCTGAAGCACTGGGCAACCTGGTTGAAGGGATGGACTTCCACAGATTCTACTT 1271
|||||.||.||.||.|||||||||||.||.||.||.|||||.||.||.||||||||.|||||.|..||.|||||
Sbjct 997 CCAGGCCTCACTTCCTTTGAGCCTGAGGCCCTTGGTAACCTCGTGGAGGGGATGGATTTCCATAAGTTTTACTT 1070
Query 1272 CGAGAACCTGCTGGCCAAGAACAGCAAGCCGATCCACACGACCATCCTGAACCCACACGTGCACGTCATTGGAG 1345
.|||||.||.|||.||||||||||||||||.|||||.||.||||||||.|||||||||||.|||||.|||||.|
Sbjct 1071 TGAGAATCTCCTGTCCAAGAACAGCAAGCCTATCCATACCACCATCCTAAACCCACACGTCCACGTGATTGGGG 1144
Query 1346 AGGATGCCGCCTGCATCGCTTACATCCGGCTCACGCAGTACATTGACGGGCAGGGCCGGCCCCGCACCAGCCAG 1419
||||.||.||.||||||||.||||||||.|||||.||||||||.|||||||||||.|||||.||||||||||||
Sbjct 1145 AGGACGCAGCGTGCATCGCCTACATCCGCCTCACCCAGTACATCGACGGGCAGGGTCGGCCTCGCACCAGCCAG 1218
Query 1420 TCTGAGGAGACCCGCGTGTGGCACCGCCGCGACGGCAAGTGGCAGAACGTGCACTTCCACTGCTCGGGCGCGCC 1493
||.||.||||||||.||.||||||||.||.||.||||||||||..||.||.||||..||||||||.||.||.||
Sbjct 1219 TCAGAAGAGACCCGGGTCTGGCACCGTCGGGATGGCAAGTGGCTCAATGTCCACTATCACTGCTCAGGGGCCCC 1292
Query 1494 TGTGGCCCCGCTGCAG 1509
||..||.|||||||||
Sbjct 1293 TGCCGCACCGCTGCAG 1308