Nucleotide Global Alignment

Description

Query:
TRCN0000480237
Subject:
XR_001749744.2
Aligned Length:
2725
Identities:
437
Gaps:
2280

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTGATCTCGGGTTTGTCGGGCTGAAATGTGGCGGGTCTCGGAAGGTTCCGACCTCAGTAAAGAGAGCTAACGTG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TATTCTTCTTTTTCTTAGCGTGTTGCTTTGTCGCCCACGCTGGTTGCAGTGGTGCGATCTCAGTTCACTGCAAC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CTTCGCCTCCCAGGTTCAAGCGATTATCCTGCCTCAGCTTCCCGAGCAGCTAGGACTACAGGTGTGTGCCATCA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CGCTCAGCTAATTTTTTTGGTATTTTTAGTAGAGATGGGGTTTTCCCATGTTGGCCAGGCTGGTCTCGAACTCC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TGACCTCAGATGATCTGCCCGCCTCGGCCTCCCAAAGTGGTAGGATTACAGGCGTGAGCCACTGTGCTCGGCAC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ATTTTGGTATGTTTCTTATTTAACTTTCTTTTTAAAAAATACTCTATGTGCTTTTTTTTTTTTACATGTATACC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TTATATTGTAGAATATTTTTTAAATGTAATTGAGATTCTATTTTGTTCCTTGCCTTTCTTGCTTAATATAATTG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TCACCATTTAATATAACTGTAGAGCTTTTCACCAGCCCTACTTTCTTGGTCTATTAATACTTGAACTTTTCTTC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CTTTAGGATCTCAGCTAAACGGGAAGCATTTTTGAAAAGTGATTGCACAATTGAGAGTGAAAATTACTGAGTCC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TGAACAGGCAACTTACATTCTAATACCAGCTCTGTCTCCATCCAGCCGACTGAATAGTCGTGATTAAGTTACTT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GACTTCCTTGGATATCTAGATCCTTAAAGTTAAAGAATTATACAAGATAATAATATTTTCTTCAAACTTTAGAA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AATGACTTTATGAACCGCCTTAAGTTTGTATGTTTTCATAGCTTTCAAGAGCTTGTTTACACACTCAATTCTAG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ATTCTAGATACTTTCTAGAAAATAACTGACTTAACTCATTCAATTGATATATTTGTTAGTTGTACTCCTACTCA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TATGCTTCAGTTAATTATATATGTTGAACAGGTAGGAAGCAGTGCTGTTTTTATTTATTTTAATATGTTATTCA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TACATTTGAAGAATTATGTTCTTTCTGTAGGCAGCTGAATTTTTTTTTTTTTTGAGACGAAGTCTTGGTATTGT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CCCCCTTGCTGGAGTGCAATGGCATGATCTCGGCTCACTGCAACCTCTGCCTCCTGGGTTCAGGCAATTCTCCT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GCCTCAGACTCCTGAGTAGCTGGGATTACAGGCGCCTGCCACCACGCCCGGATAATTTTTGTATTTTTAGTAGA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GACAGTGTTTCACTATGTTGGCTGGGCTGGTCTCGAACTCCTGCCCTCAGGTGATCCGCCTGCCTCAGCCTCCC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  AAAGTGCTGGGATTACTGGCGTGAGCCACTGCTGCCAGCCGGCAGTTGAATTTTAAGACTGTGGAGCTGGCTGA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GGCAGTAGATGAAACAAGATTTCTTGATGTTCCTTCCAGGTTTATTATGCATGTATCTTTAGAGATGATTTTTT  1480

Query    1  ------------------------------------ATGAATCGTCACCTGTGTGTTTGGCTTTTTAGACATCC  38
                                                ||||||||||||||||||||||||||||||||||||||
Sbjct 1481  TTTAAAGACTGTGTTTATTGTATTTCAGATGCTGAGATGAATCGTCACCTGTGTGTTTGGCTTTTTAGACATCC  1554

Query   39  ATCTCTTAATGGTTACCTCCAGTGTCACATCCAGCTCCATTCTCATCAATTTAGACAGATACATCTTGATACAA  112
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  ATCTCTTAATGGTTACCTCCAGTGTCACATCCAGCTCCATTCTCATCAATTTAGACAGATACATCTTGATACAA  1628

Query  113  GGCTGCAAGTTTTTAGACAAAACAGGAATTGCATTCTTCATCTGTTAAGTAAGAATTGGTCCAGGAGATATTGC  186
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  GGCTGCAAGTTTTTAGACAAAACAGGAATTGCATTCTTCATCTGTTAAGTAAGAATTGGTCCAGGAGATATTGC  1702

Query  187  CATCAAGACACCAAGATGCTCTGGAAGCATAAAGCACTACAGAAATATATGGAGAACCTGAGTAAGGAGTACCA  260
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  CATCAAGACACCAAGATGCTCTGGAAGCATAAAGCACTACAGAAATATATGGAGAACCTGAGTAAGGAGTACCA  1776

Query  261  AACACTTGAGCAATGTCTGCAGCATATCCCTGTGAATGAGGAAAACCGAAGGTCCTTGAACAGAAGGCATGCTG  334
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  AACACTTGAGCAATGTCTGCAGCATATCCCTGTGAATGAGGAAAACCGAAGGTCCTTGAACAGAAGGCATGCTG  1850

Query  335  AGTTGGCACCTCTTGCAGCCATTTACCAAGAAATTCAGGAGACTGAACAAGCAATTGAAGAATTAGAATCAATG  408
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  AGTTGGCACCTCTTGCAGCCATTTACCAAGAAATTCAGGAGACTGAACAAGCAATTGAAGAATTAGAATCAATG  1924

Query  409  TGTAAAA--------AGACA----------GAGT--------CTTGCTCTGTGGCCCAGGCTGGAATGCAG---  453
            |||||||        |.|||          .|||        |||||.||        ||..|.||.|||.   
Sbjct 1925  TGTAAAAGCCTAAATAAACAAGATGAAAAGCAGTTACAAGAACTTGCACT--------GGAAGAAAGGCAAACC  1990

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 1991  ATTGATCAAAAAATCAACATGTTGTACAATGAGCTTTTCCAGAGCCTTGTGCCAAAGGAGAAATATGACAAAAA  2064

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 2065  TGATGTTATTTTAGAGGTGACAGCTGGAAGGACTACTGGAGGTGACATCTGCCAACAATTTACCCGAGAAATAT  2138

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 2139  TTGACATGTACCAGAATTATTCGTGCTATAAACACTGGCAATTTGAACTTCTGAATTATACACCAGCAGATTAT  2212

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 2213  GGTGGACTACATCATGCAGCCGCCCGAATTTCCGGTGACGGTGTCTATAAGCATTTGAAGTATGAGGGTGGGAT  2286

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 2287  TCACCGAGTTCAGCGCATCCCCGAGGTGGGCCTGTCCTCAAGGATGCAGCGCATTCACACAGGAACGATGTCGG  2360

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 2361  TTATTGTCCTTCCTCAGCCAGATGAGGTGGATGTGAAATTGGACCCCAAGGATTTGCGAATAGATACATTTCGA  2434

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 2435  GCCAAAGGAGCAGGAGGGCAGCATGTTAATAAAACTGATAGTGCCGTCAGACTTGTCCACATCCCCACAGAGAT  2508

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 2509  GGGGTTTCACTGTGTTATCCAGTATGGTCGTGATCTCCTGACCTTGTGATCCACCCGCCTTGCCTTCCCAAAAT  2582

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 2583  CCTCGGATTACAGGTGTGAGCCACTGCGCCCAGCCATTATAAAGGGCTAGTAGTAGAATGCCAACAAGAAAGAT  2656

Query  454  -------------------------------------------------------------  453
                                                                         
Sbjct 2657  CACAGATAAAAAATAAAGAAATAGCCTTTCGTGTGTTGAGAGCTAGACTCTACCAGCAGAT  2717

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