Nucleotide Global Alignment

Description

• Query: TRCN0000480249
• Subject: XM_006498188.3
• Aligned Length: 1154
• Identities: 766
• Gaps: 277

Alignment

Query    1  ATGGCCTCGCGCTGGTGGCGGTGGCGGCGCGGCTGCTCCTGGAAGCCG---GCGG-CGCGGAGCCC----CGGG  66
            |||||...||||||||.|.|.||||||||.|||||||||||||.||||   |||| || |||||||    ||||
Sbjct    1  ATGGCTATGCGCTGGTCGTGCTGGCGGCGTGGCTGCTCCTGGAGGCCGACCGCGGTCG-GGAGCCCGCGGCGGG  73

Query   67  CCCGGCTCCCCCGGCCGTGCGGTACCGTTGGGGCCGAGCGCCGCTGCCGAAGTCCGCGCGCAGGTTCATAGGCG  140
            ..||    .||.|||.|||.||..||..|.||..|..|.|||||..|.||...|||||||              
Sbjct   74  AACG----ACCTGGCTGTGTGGAGCCTCTCGGAACACGTGCCGCCTCGGACACCCGCGCG--------------  129

Query  141  GAAGGGACTTGACTTGTCTCAGATACCCTATATTAATCTTGTGAAGCATTTAACATCTGCCTGTCCAAATGTAT  214
                               ||||||||||||.|||.||||.|||||..|||||..|||||||..||||  .|||
Sbjct  130  -------------------CAGATACCCTATTTTAGTCTTATGAAGATTTTAATGTCTGCCTCCCCAA--CTAT  182

Query  215  G--TCGTATATCACGGTTTCATCACACAACCCCAGACA-------------GTAAAACACACAGTGGTGAAAAA  273
            |  |.|||||||||.|||||||||.|..||.|||| ||             ||.||||.||.||||||||.|||
Sbjct  183  GCATAGTATATCACAGTTTCATCAAAGGACACCAG-CAATGTGCAGTTGTCGTCAAACTCAGAGTGGTGAGAAA  255

Query  274  TACACCGATCCTTTCAAACTCGGTTGGAGAGACTTGAAAGGTCTGTATGAGGACATTAGAAAGGAACTGCTTAT  347
            ||||..||||||||.|||||.||.||||||||||||||||||||||||||.||||||||||||||.||||..||
Sbjct  256  TACAGTGATCCTTTTAAACTTGGCTGGAGAGACTTGAAAGGTCTGTATGAAGACATTAGAAAGGAGCTGCACAT  329

Query  348  ATCAACATCAGAACTTAAGGAAATGTCTGAGTACTACTTTGATGGGAAAGGGAAAGCCTTTCGACCAATTATTG  421
            .||.||...||||||.|||||.|||||.||.||||||||.|||||.|||||.|||||||||.||||.|||||||
Sbjct  330  CTCCACCAGAGAACTAAAGGACATGTCCGAATACTACTTCGATGGCAAAGGAAAAGCCTTTAGACCGATTATTG  403

Query  422  TGGCGCTAATGGCCCGAGCATGCAATATTCATCATAACAACTCCCGACATGTGCAAGCCAGCCAGCGCGCCATA  495
            |||.|||||||||||||||.||.||||||||||||||.||..|||||.|..|||||||||||||||||.|||||
Sbjct  404  TGGTGCTAATGGCCCGAGCGTGTAATATTCATCATAATAATGCCCGAGAGATGCAAGCCAGCCAGCGCTCCATA  477

Query  496  GCCTTAATTGCAGAAATGATCCACACTGCTAGTCTGGTTCACGATGACGTTATTGACGATGCAAGTTCTCGAAG  569
            ||||||.||||||||||||||||||||||||.|||||||||.||||||||||||||.|||||||||||||||||
Sbjct  478  GCCTTAGTTGCAGAAATGATCCACACTGCTACTCTGGTTCATGATGACGTTATTGATGATGCAAGTTCTCGAAG  551

Query  570  AGGAAAACACACAGTTAATAAGATCTGGGGTGAAAAGAAGGCTGTTCTTGCTGGAGATTTAATTCTTTCTGCAG  643
            |||||||||.|||||||||||.|||||||||||.||.|||||||||||||||||||||||||||||||||||||
Sbjct  552  AGGAAAACATACAGTTAATAAAATCTGGGGTGAGAAAAAGGCTGTTCTTGCTGGAGATTTAATTCTTTCTGCAG  625

Query  644  CATCTATAGCTCTGGCACGAATTGGAAATACAACTGTTATATCTATTTTAACCCAAGTTATTGAAGATTTGGTG  717
            |.|||.|||||||||||||.||||||||.|||.|||||.|||||||.|||.|||||||||||||||||||||||
Sbjct  626  CGTCTGTAGCTCTGGCACGGATTGGAAACACAGCTGTTGTATCTATGTTAGCCCAAGTTATTGAAGATTTGGTG  699

Query  718  CGTGGTGAATTTCTTCAGCTCGGGTCAAAAGAAAATGAGAATGAAAGATTTGCACACTACCTTGAGAAGACATT  791
            ||||||||||||||||||||.||||||||||||||||||||||||||.|||||.|||||||||||||||||.||
Sbjct  700  CGTGGTGAATTTCTTCAGCTAGGGTCAAAAGAAAATGAGAATGAAAGGTTTGCCCACTACCTTGAGAAGACCTT  773

Query  792  CAAGAAGACCGCCAGCCTGATAGCCAACAGTTGTAAAGCAGT--------------------------------  833
            |||||||||.||||||||||||||||||||||||||||||||                                
Sbjct  774  CAAGAAGACAGCCAGCCTGATAGCCAACAGTTGTAAAGCAGTCTCTGTCCTGGGTTGCCCTGACCCAGTGGTGC  847

Query  834  ---------------------------------------------ATTTCCCAGAAATGAATGCTATGATCATG  862
                                                         |.|||||||||||||||||||||||.|||
Sbjct  848  ATGAGATAGCCTATCAGTATGGGAAAAATGTTGGAATAGCTTTTCAGTTCCCAGAAATGAATGCTATGATAATG  921

Query  863  CGACGGTTCAGTTTGCCTGGAGATGTAGACAGAGCTCGACAGTATGTACTACAGAG------------------  918
            .||||||||||||||||.||||||||.||||||||.||||||||||||.|||||||                  
Sbjct  922  AGACGGTTCAGTTTGCCAGGAGATGTGGACAGAGCACGACAGTATGTATTACAGAGTGATGGCGTGCAGCAAAC  995

Query  919  --------------------------------------------------------------------------  918
                                                                                      
Sbjct  996  AACCTACCTCGCCCAGCAGTACTGCCACAAAGCTGTGAGAGAGATCAGGAAGCTTAGACCATCTACAGAAAGGG  1069

Query  919  --------------------------------------------  918
                                                        
Sbjct 1070  ACGCCCTCATTCAGCTTTCAGAAAGTGTGCTCACCAGAGATAAA  1113