Nucleotide Global Alignment

Description

Query:
TRCN0000480249
Subject:
XM_006498191.3
Aligned Length:
1245
Identities:
417
Gaps:
798

Alignment

Query    1  ATGGCCTCGCGCTGGTGGCGGTGGCGGCGCGGCTGCTCCTGGAAGCCGGCGGCGCGGAGCCCCGGGCCCGGCTC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CCCCGGCCGTGCGGTACCGTTGGGGCCGAGCGCCGCTGCCGAAGTCCGCGCGCAGGTTCATAGGCGGAAGGGAC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TTGACTTGTCTCAGATACCCTATATTAATCTTGTGAAGCATTTAACATCTGCCTGTCCAAATGTATGTCGTATA  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  TCACGGTTTCATCACACAACCCCAGACAGTAAAACACACAGTGGTGAAAAATACACCGATCCTTTCAAACTCGG  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  TTGGAGAGACTTGAAAGGTCTGTATGAGGACATTAGAAAGGAACTGCTTATATCAACATCAGAACTTAAGGAAA  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  TGTCTGAGTACTACTTTGATGGGAAAGGGAAAGCCTTTCGACCAATTATTGTGGCGCTAATGGCCCGAGCATGC  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  AATATTCATCATAACAACTCCCGACATGTGCAAGCCAGCCAGCGCGCCATAGCCTTAATTGCAGAAATGATCCA  518
                                       .|||||||||||||||||.|||||||||||.||||||||||||||||
Sbjct    1  ---------------------------ATGCAAGCCAGCCAGCGCTCCATAGCCTTAGTTGCAGAAATGATCCA  47

Query  519  CACTGCTAGTCTGGTTCACGATGACGTTATTGACGATGCAAGTTCTCGAAGAGGAAAACACACAGTTAATAAGA  592
            ||||||||.|||||||||.||||||||||||||.||||||||||||||||||||||||||.|||||||||||.|
Sbjct   48  CACTGCTACTCTGGTTCATGATGACGTTATTGATGATGCAAGTTCTCGAAGAGGAAAACATACAGTTAATAAAA  121

Query  593  TCTGGGGTGAAAAGAAGGCTGTTCTTGCTGGAGATTTAATTCTTTCTGCAGCATCTATAGCTCTGGCACGAATT  666
            ||||||||||.||.||||||||||||||||||||||||||||||||||||||.|||.|||||||||||||.|||
Sbjct  122  TCTGGGGTGAGAAAAAGGCTGTTCTTGCTGGAGATTTAATTCTTTCTGCAGCGTCTGTAGCTCTGGCACGGATT  195

Query  667  GGAAATACAACTGTTATATCTATTTTAACCCAAGTTATTGAAGATTTGGTGCGTGGTGAATTTCTTCAGCTCGG  740
            |||||.|||.|||||.|||||||.|||.|||||||||||||||||||||||||||||||||||||||||||.||
Sbjct  196  GGAAACACAGCTGTTGTATCTATGTTAGCCCAAGTTATTGAAGATTTGGTGCGTGGTGAATTTCTTCAGCTAGG  269

Query  741  GTCAAAAGAAAATGAGAATGAAAGATTTGCACACTACCTTGAGAAGACATTCAAGAAGACCGCCAGCCTGATAG  814
            ||||||||||||||||||||||||.|||||.|||||||||||||||||.|||||||||||.|||||||||||||
Sbjct  270  GTCAAAAGAAAATGAGAATGAAAGGTTTGCCCACTACCTTGAGAAGACCTTCAAGAAGACAGCCAGCCTGATAG  343

Query  815  CCAACAGTTGTAAAGCAGT-------------------------------------------------------  833
            |||||||||||||||||||                                                       
Sbjct  344  CCAACAGTTGTAAAGCAGTCTCTGTCCTGGGTTGCCCTGACCCAGTGGTGCATGAGATAGCCTATCAGTATGGG  417

Query  834  --------------------------------------------------------------------------  833
                                                                                      
Sbjct  418  AAAAATGTTGGAATAGCTTTTCAGCTCATAGATGATGTATTGGATTTCACCTCATGTTCTGACCAGATGGGCAA  491

Query  834  --------------------------------------------------------------ATTTCCCAGAAA  845
                                                                          |.||||||||||
Sbjct  492  GCCAACATCTGCAGACCTGAAGCTAGGCATAGCCACTGGCCCTGTCTTGTTTGCTTGCCAGCAGTTCCCAGAAA  565

Query  846  TGAATGCTATGATCATGCGACGGTTCAGTTTGCCTGGAGATGTAGACAGAGCTCGACAGTATGTACTACAGAG-  918
            |||||||||||||.|||.||||||||||||||||.||||||||.||||||||.||||||||||||.||||||| 
Sbjct  566  TGAATGCTATGATAATGAGACGGTTCAGTTTGCCAGGAGATGTGGACAGAGCACGACAGTATGTATTACAGAGT  639

Query  919  --------------------------------------------------------------------------  918
                                                                                      
Sbjct  640  GATGGCGTGCAGCAAACAACCTACCTCGCCCAGCAGTACTGCCACAAAGCTGTGAGAGAGATCAGGAAGCTTAG  713

Query  919  -------------------------------------------------------------  918
                                                                         
Sbjct  714  ACCATCTACAGAAAGGGACGCCCTCATTCAGCTTTCAGAAAGTGTGCTCACCAGAGATAAA  774