Nucleotide Global Alignment
Description
- Query:
- TRCN0000480263
- Subject:
- XR_002956463.1
- Aligned Length:
- 3859
- Identities:
- 1242
- Gaps:
- 2617
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTTCCCAGCAGGATGCCCCGGCTCTGCAGGAAGCTGAAGTGAGAGGCCCGGAGAGGGCCCAGCCCGCCCGGGGC 74
Query 1 ---ATGACCAAGGCCCGGCTGTTCCGGCTGTGGCTGGTGCTGGGGTCGGTGTTCATGATCCTGCTGATCATCGT 71
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AGGATGACCAAGGCCCGGCTGTTCCGGCTGTGGCTGGTGCTGGGGTCGGTGTTCATGATCCTGCTGATCATCGT 148
Query 72 GTACTGGGACAGCGCAGGCGCCGCGCACTTCTACTTGCACACGTCCTTCTCTAGGCCGCACACGGGGCCGCCGC 145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GTACTGGGACAGCGCAGGCGCCGCGCACTTCTACTTGCACACGTCCTTCTCTAGGCCGCACACGGGGCCGCCGC 222
Query 146 TGCCCACGCCCGGGCCGGACAGGGACAGGGAGCTCACGGCCGACTCCGATGTCGACGAGTTTCTGGACAAGTTT 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TGCCCACGCCCGGGCCGGACAGGGACAGGGAGCTCACGGCCGACTCCGATGTCGACGAGTTTCTGGACAAGTTT 296
Query 220 CTCAGTGCTGGCGTGAAGCAGAGCGACCTTCCCAGAAAGGAGACGGAGCAGCCGCCTGCGCCGGGGAGCATGGA 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CTCAGTGCTGGCGTGAAGCAGAGCGACCTTCCCAGAAAGGAGACGGAGCAGCCGCCTGCGCCGGGGAGCATGGA 370
Query 294 GGAGAGCGTGAGAGGCTACGACTGGTCCCCGCGCGACGCCCGGCGCAGCCCAGACCAGGGCCGGCAGCAGGCGG 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GGAGAGCGTGAGAGGCTACGACTGGTCCCCGCGCGACGCCCGGCGCAGCCCAGACCAGGGCCGGCAGCAGGCGG 444
Query 368 AGCGGAGGAGCGTGCTGCGGGGCTTCTGCGCCAACTCCAGCCTGGCCTTCCCCACCAAGGAGCGCGCATTCGAC 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AGCGGAGGAGCGTGCTGCGGGGCTTCTGCGCCAACTCCAGCCTGGCCTTCCCCACCAAGGAGCGCGCATTCGAC 518
Query 442 GACATCCCCAACTCGGAGCTGAGCCACCTGATCGTGGACGACCGGCACGGGGCCATCTACTGCTACGTGCCCAA 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GACATCCCCAACTCGGAGCTGAGCCACCTGATCGTGGACGACCGGCACGGGGCCATCTACTGCTACGTGCCCAA 592
Query 516 GGTGGCCTGCACCAACTGGAAGCGCGTGATGATCGTGCTGAGCGGAAGCCTGCTGCACCGCGGTGCGCCCTACC 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GGTGGCCTGCACCAACTGGAAGCGCGTGATGATCGTGCTGAGCGGAAGCCTGCTGCACCGCGGTGCGCCCTACC 666
Query 590 GCGACCCGCTGCGCATCCCGCGCGAGCACGTGCACAACGCCAGCGCGCACCTGACCTTCAACAAGTTCTGGCGC 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GCGACCCGCTGCGCATCCCGCGCGAGCACGTGCACAACGCCAGCGCGCACCTGACCTTCAACAAGTTCTGGCGC 740
Query 664 CGCTACGGGAAGCTCTCCCGCCACCTCATGAAGGTCAAGCTCAAGAAGTACACCAAGTTCCTCTTCGTGCGCGA 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CGCTACGGGAAGCTCTCCCGCCACCTCATGAAGGTCAAGCTCAAGAAGTACACCAAGTTCCTCTTCGTGCGCGA 814
Query 738 CCCCTTCGTGCGCCTGATCTCCGCCTTCCGCAGCAAGTTCGAGCTGGAGAACGAGGAGTTCTACCGCAAGTTCG 811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CCCCTTCGTGCGCCTGATCTCCGCCTTCCGCAGCAAGTTCGAGCTGGAGAACGAGGAGTTCTACCGCAAGTTCG 888
Query 812 CCGTGCCCATGCTGCGGCTGTACGCCAACCACACCAGCCTGCCCGCCTCGGCGCGCGAGGCCTTCCGCGCTGGC 885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CCGTGCCCATGCTGCGGCTGTACGCCAACCACACCAGCCTGCCCGCCTCGGCGCGCGAGGCCTTCCGCGCTGGC 962
Query 886 CTCAAGGTGTCCTTCGCCAACTTCATCCAGTACCTGCTGGACCCGCACACGGAGAAGCTGGCGCCCTTCAACGA 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CTCAAGGTGTCCTTCGCCAACTTCATCCAGTACCTGCTGGACCCGCACACGGAGAAGCTGGCGCCCTTCAACGA 1036
Query 960 GCACTGGCGGCAGGTGTACCGCCTCTGCCACCCGTGCCAGATCGACTACGACTTCGTGGGGAAGCTGGAGACTC 1033
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GCACTGGCGGCAGGTGTACCGCCTCTGCCACCCGTGCCAGATCGACTACGACTTCGTGGGGAAGCTGGAGACTC 1110
Query 1034 TGGACGAGGACGCCGCGCAGCTGCTGCAGCTACTCCAGGTGGACCGGCAGCTCCGCTTCCCCCCGAGCTACCGG 1107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TGGACGAGGACGCCGCGCAGCTGCTGCAGCTACTCCAGGTGGACCGGCAGCTCCGCTTCCCCCCGAGCTACCGG 1184
Query 1108 AACAGGACCGCCAGCAGCTGGGAGGAGGACTGGTTCGCCAAGATCCCCCTGGCCTGGAGGCAGCAGCTGTATAA 1181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AACAGGACCGCCAGCAGCTGGGAGGAGGACTGGTTCGCCAAGATCCCCCTGGCCTGGAGGCAGCAGCTGTATAA 1258
Query 1182 ACTCTACGAGGCCGACTTTGTTCTCTTCGGCTACCCCAAGCCCGAAAACCTCCTCCGAGAC------------- 1242
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 ACTCTACGAGGCCGACTTTGTTCTCTTCGGCTACCCCAAGCCCGAAAACCTCCTCCGAGACTGAAAGCTTTCGC 1332
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 1333 GTTGCTTTTTCTCGCGTGCCTGGAACCTGACGCACGCGCACTCCAGTTTTTTTATGACCTACGATTTTGCAATC 1406
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 1407 TGGGCTTCTTGTTCACTCCACTGCCTCTATCCATTGAGTACTGTATCGATATTGTTTTTTAAGATTAATATATT 1480
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 1481 TCAGAGGGTGTAGGAGTTGTGTTCCAAGTTTGTTCCTGCAAACCCTCCGATGAGGCCAGCTGCATTCATCGGGG 1554
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 1555 CCTGGATGGCCGCACCTCTCTCTCCCCGCCCTGTCTCCTGCACTCAGAGACGGAGTTTCACCATGTTAGCCAGG 1628
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 1629 ATGCTCTGGATCTCCTGACCTCGTGATCCACCCACCTCGGCCTCCCAAACTGCTGGGATTACAGGCATGAGACA 1702
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 1703 CCACGCCCCGCCGAGTCCCTGCTTTTAATTCTTTGGGGCAGGGATCCCCAACCCCCTGGTGATGGACCAATACT 1776
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 1777 GGCCTGCGGCCCCTTAGGAACTGGACTGCACAGCAGGAGGTGAGCGGCAGATGGCATGGGAAAGTAGCACACAG 1850
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 1851 TCGGGACTCTGCAGCCGAGTTTGCCTCCTTGAATGCACACATAACACAGGAACAAAGACAGAGCTGCTTCCCTC 1924
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 1925 CTGTTGGGTCTCTGGCGGACAGTCAGTCTCATTTCCAGATGGGGAAAGGGAGACCCAGGCTGCGGTGACCCACT 1998
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 1999 GAGGCACAGGATCAGTGAGAACCCAGCCCTGGCTTTGCCCAGACCTCTCAAGGGCACTTCGTGGGACCATTGCC 2072
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 2073 GGCCGTTGTGGCATCTGTCCCTGGCCTTGCCCCCATCCGTCTCTGCACAGCCCAGGTGGGTCCGAGCCAGCCCC 2146
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 2147 AGGTCTCCAGGGTCCCAGCCCAGCCTCTAGAAGAGCCAGCAGCAGGGCTGGAAGGGAGAGCACATGCTGGGCCT 2220
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 2221 TGGGGCTGCCTTGGACCTCAGGCCGTTGACAAGGAAAAGCGGAGAGTTGGGAAAAAAGGACAAATAGCTGAGCG 2294
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 2295 CCAGCCGCAGTCTGGGGGACGGGAGCCTCGTGCGACTCTCGGAGTGCTGGCCAGATTGGCAGAGGGGAGGAGAG 2368
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 2369 AGGAAAAACCCAGGCTCTGAGGAAAAACCTCTCCAGCCCAGCGCGTGGCCTGGCATTAACCCACTGCAGCCCCA 2442
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 2443 GGAAGTGGTTCCACCCCAGGCAGCCAACAAGGCGGTGCCTGAACTATGTCTGTGGATGACGGAGCCACGACCTG 2516
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 2517 TCCCTCAGGGCTCAGCGCTGCGGCTATGTCCAGGGACCCCTGGCTGTGCCCACGTCGGGGCTTCCCGTTCCTTA 2590
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 2591 CCTGCCATGAGAATGAGATGTCCAGGGACCTCCCTGCTCCAGCTGGGACCTGTGGGGCTTTGTCTGTTGTCCCG 2664
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 2665 AGCACCTTGGAGATGTCATTTCTAACATTTTAACCCAGGAATCCCCCCACCAAGGGACAGAGTGCAAGGACATG 2738
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 2739 ATCGAACAGAAAAAGTTCTGGTACAAGATCAACCCCGTGGGGTGGTGAGTGCTGCAGCCCCGGGCCTCACATCC 2812
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 2813 TGCCGTCCCTGTGGGAGATTGGAGCGGTCCCAGTGCCCACCGCTGATTCTCTGGCTCCAGCAACCCCTCCAGGT 2886
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 2887 GGATCCGTCCCACGCAGCCTGGCCTGAAACACTGCCCAGCCACTGGGTCCAGTAAGACAGAGCCTCGAGTCATT 2960
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 2961 CTGCCAAGAGGATCCAGAAACACAGACTTTTTCTGGGGTCCTGGAGGCTTCTGGCCCATGGGGAGCCCCTGGGT 3034
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 3035 CCCAGCGATCCAGCCCTGATGTGCTGAGGGTGCAGGGCCCAGCTGCAGAGCAGAGGAGAGTGGCCCCCAGGGAC 3108
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 3109 CAGCAGCACGAAAGGCACACTGAGGCACACTGGCAGGCCTGGGCTGCAGAGAGCCTGAAGGTCATGGGGTAGCT 3182
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 3183 GGTGGAAGCAGGAAGACCCCATACAGCAGCGACCACTGAGGCTGGTGCTGCACTTTCTCAGGGAATTGAGTGTG 3256
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 3257 GGCTCCCACCATCCCGGCCACTGGCTTCCTCCAAAGCCTCCTCCTCTTACATCAGCAAACCTTCTGTTCGGTGA 3330
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 3331 CCCCCTCAGTGACCCTCTGTGCTTGCCTTCGTGGTCTTCCTCATGGAGGATTTCGGGTCAGCGTGGGGGTCAGA 3404
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 3405 GGTCATTTCCCATACCCCCTCAAAGGTACTTCTTGCTGTGGTCCCCACACTCTGACACCCTCTTCTGAAATGAA 3478
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 3479 CACTTTTTTGTTGTTGTTGTTGAGACAGAGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCACAATCTTAG 3552
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 3553 CTCACTGCAACCTCCACCTCCCAGGTTCAAGCGATTTTCATGCCTCAGCTTCCCGAGTAGCTGGGATTACAGGC 3626
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 3627 ATGTGCCACCAAGCCCAGCTAATTTTTGTATTTTTAGTAGAGATGAGGTTTCACCATGTTGGCCAGGCTGGTCT 3700
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 3701 CGAACTTCTGACCTCAAGTGATTCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAAGCATGAGCCACTGCG 3774
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 3775 CCCGGCCACAAACACTTTTTTTTTTTTAAACAAGTGAAAACAAGTTTATTAACAAAGTTAAGAAATAAAGAATG 3848
Query 1243 ----------- 1242
Sbjct 3849 GCTATTCCATA 3859
