Nucleotide Global Alignment
Description
- Query:
- TRCN0000480317
- Subject:
- NM_001146031.1
- Aligned Length:
- 3566
- Identities:
- 2029
- Gaps:
- 1261
Alignment
Query 1 ATGCAGCTTAAAATAATGCCGAAAAAGAAGCGCTTATCTGCGGGCAGAGTGCCCCTGATTCTCTTCCTGTGCCA 74
|||||||||||||||||||||||.|||||||.|||||||||.|||.||||||||||||||||||||||||||||
Sbjct 1 ATGCAGCTTAAAATAATGCCGAAGAAGAAGCACTTATCTGCAGGCGGAGTGCCCCTGATTCTCTTCCTGTGCCA 74
Query 75 GATGATTAGTGCACTGGAAGTACCTCTTGATCTGGTACAGCCTCCAACCATCACCCAACAGTCTCCAAAAGATT 148
||||||.||.||.|||||.||.|||||.|||||||||||.||||||||||||||.||||||||.||||||||.|
Sbjct 75 GATGATCAGCGCGCTGGATGTTCCTCTCGATCTGGTACAACCTCCAACCATCACTCAACAGTCACCAAAAGACT 148
Query 149 ACATTATTGACCCTCGGGAGAATATTGTAATCCAGTGTGAAGCCAAAGGGAAACCGCCCCCAAGCTTTTCCTGG 222
||||.|||||||||||||||||||||||||||||||||||.||||||||||||||.||||||||||||||||||
Sbjct 149 ACATCATTGACCCTCGGGAGAATATTGTAATCCAGTGTGAGGCCAAAGGGAAACCTCCCCCAAGCTTTTCCTGG 222
Query 223 ACCCGTAATGGGACTCATTTTGACATCGATAAAGACCCTCTGGTCACCATGAAGCCTGGCACAGGAACGCTCAT 296
||.||||||||.|||||.||||||||.||.||.|||||||||||||||||||||||||||.|||||||.||..|
Sbjct 223 ACTCGTAATGGAACTCACTTTGACATAGACAAGGACCCTCTGGTCACCATGAAGCCTGGCTCAGGAACCCTTGT 296
Query 297 AATTAACATCATGAGCGAAGGGAAAGCTGAGACCTATGAAGGAGTCTATCAGTGTACAGCAAGGAACGAACGCG 370
.||.|||||||||||.||.|||||.||.||||||||||||||||||||.|||||.||.|||||||||||.||.|
Sbjct 297 CATCAACATCATGAGTGAGGGGAAGGCAGAGACCTATGAAGGAGTCTACCAGTGCACTGCAAGGAACGAGCGTG 370
Query 371 GAGCTGCAGTTTCTAATAACATTGTTGTCCGCCCATCCAGATCACCATTGTGGACCAAAGAAAAACTTGAACCA 444
|||||||.||.||.|||||||||||||||||||||||.||.|||||.|||||||||||.||||.|||||||||.
Sbjct 371 GAGCTGCCGTCTCCAATAACATTGTTGTCCGCCCATCTAGGTCACCCTTGTGGACCAAGGAAAGACTTGAACCT 444
Query 445 ATCACACTTCAAAGTGGTCAGTCTTTAGTACTTCCCTGCAGACCCCCAATTGGATTACCACCACCTATAATATT 518
||...|||.||.|.|||.|||||.|||||||||||.||.||.||.||.|||||||||||.||..|.||||||||
Sbjct 445 ATAGTACTCCAGAATGGGCAGTCATTAGTACTTCCATGTAGGCCTCCGATTGGATTACCTCCGGCCATAATATT 518
Query 519 TTGGATGGATAATTCCTTTCAAAGACTTCCACAAAGTGAGAGAGTTTCTCAAGGTTTGAATGGGGACCTTTATT 592
|||||||||||||||||||||.|||||||||||.||||||.|.|||||.|||||..|.|||||.||||||||.|
Sbjct 519 TTGGATGGATAATTCCTTTCAGAGACTTCCACAGAGTGAGCGGGTTTCCCAAGGCCTAAATGGAGACCTTTACT 592
Query 593 TTTCCAATGTCCTCCCAGAGGACACCCGCGAAGACTATATCTGTTATGCTAGATTTAATCATACTCAAACCATA 666
|.||||||||||||||||||||||||||.||.|||||||||||.|||||.|||||||||||.|||||||||||.
Sbjct 593 TCTCCAATGTCCTCCCAGAGGACACCCGTGAGGACTATATCTGCTATGCCAGATTTAATCACACTCAAACCATC 666
Query 667 CAGCAGAAGCAACCTATTTCTGTGAAGGTGATTTCAGTGGATGAATTGAATGACACTATAGCTGCTAATTTGAG 740
|||||||||||.|||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CAGCAGAAGCAGCCTATTTCTTTGAAGGTGATTTCAGTGGATGAATTGAATGACACTATAGCTGCTAATTTGAG 740
Query 741 TGACACTGAGTTTTATGGTGCTAAATCAAGTAGAGAGAGGCCACCAACATTTTTAACTCCAGAAGGCAATGCAA 814
|||||||||||||||||||||||||||.||||.|||||||||.|||||.|||.||||||||||.|||||||.||
Sbjct 741 TGACACTGAGTTTTATGGTGCTAAATCTAGTAAAGAGAGGCCCCCAACGTTTCTAACTCCAGAGGGCAATGAAA 814
Query 815 GTAACAAAGAGGAATTAAGAGGAAATGTGCTTTCACTGGAGTGCATTGCAGAAGGACTGCCTACCCCAATTATT 888
|..||||||||||||||||||||||.||||||||.||||||||||||||.|||||.||.|||||.|||||||||
Sbjct 815 GCCACAAAGAGGAATTAAGAGGAAACGTGCTTTCGCTGGAGTGCATTGCGGAAGGCCTACCTACTCCAATTATT 888
Query 889 TACTGG-GCAAAGGAAGATGGAATGCTACCCAAAAACAGGACAGTTTATAAGAACTTTGAGAAAACCTTGCAGA 961
|||||| .|||| |||||.||||||||.|||...|||.|||||.|||||..|||||||.||||||||.||||||
Sbjct 889 TACTGGATCAAA-GAAGACGGAATGCTTCCCGCCAACCGGACATTTTATCGGAACTTTAAGAAAACCCTGCAGA 961
Query 962 TCATTCATGTTTCAGAAGCAGACTCTGGAAATTACCAATGTATAGCAAAAAACGCATTAGGAGCCATCCACCAT 1035
|||.|||||||||.|||||.||||||||||||||.||.||.||||||||||||||||||||||||.||||.||.
Sbjct 962 TCACTCATGTTTCCGAAGCCGACTCTGGAAATTATCAGTGCATAGCAAAAAACGCATTAGGAGCCGTCCATCAC 1035
Query 1036 ACCATTTCTGTTAGAGTTAAAGCGGCTCCATACTGGATCACAGCCCCTCAAAATCTTGTGCTGTCCCCAGGAGA 1109
|||||||||||.|..||||||||||||||.|||||||||...||.||||||||.||.|||||.|||||.|||||
Sbjct 1036 ACCATTTCTGTCACTGTTAAAGCGGCTCCCTACTGGATCGTGGCACCTCAAAACCTCGTGCTTTCCCCGGGAGA 1109
Query 1110 GGATGGGACCTTGATCTGCAGAGCTAATGGCAACCCCAAACCCAGAATTAGCTGGTTAACAAATGGAGTCCCAA 1183
|.||||||||.|.|||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||
Sbjct 1110 GAATGGGACCCTCATCTGCAGAGCTAATGGCAACCCGAAACCCAGAATTAGCTGGTTAACAAATGGAGTCCCAA 1183
Query 1184 TAGAAATTGCCCCTGATGACCCCAGCAGAAAAATAGATGGCGATACCATTATTTTTTCAAATGTTCAAGAAAGA 1257
||||||||||.|..||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||.
Sbjct 1184 TAGAAATTGCTCTCGATGACCCCAGCAGAAAAATAGATGGCGATACCATTATATTTTCAAATGTTCAAGAAAGC 1257
Query 1258 TCAAGTGCAGTATATCAGTGCAATGCCTCTAATGAATATGGATATTTACTGGCAAACGCATTTGTAAATGTGCT 1331
||||||||.||.||||||||||||||||||||..||||||||||||||||.|||||.||||||||||||||.||
Sbjct 1258 TCAAGTGCGGTTTATCAGTGCAATGCCTCTAACAAATATGGATATTTACTAGCAAATGCATTTGTAAATGTTCT 1331
Query 1332 GGCTGAGCCACCACGAATCCTCACACCTGCAAACACACTCTACCAGGTCATTGCAAACAGGCCTGCTTTACTAG 1405
.|||||.|||||.||.||.||||||.|.|||||||||||.|||||||||||||||||||||||||||||.||||
Sbjct 1332 CGCTGAACCACCTCGGATTCTCACATCAGCAAACACACTGTACCAGGTCATTGCAAACAGGCCTGCTTTGCTAG 1405
Query 1406 ACTGTGCCTTCTTTGGGTCTCCTCTCCCAACCATCGAGTGGTTTAAAGGAGCTAAAGGAAGTGCTCTTCATGAA 1479
|.||||||||||||||.||||||.|.||.|||||.||||||||||||||..||||||||||.||||||||||||
Sbjct 1406 ATTGTGCCTTCTTTGGATCTCCTATGCCTACCATTGAGTGGTTTAAAGGCACTAAAGGAAGCGCTCTTCATGAA 1479
Query 1480 GATATTTATGTTTTACATGAAAATGGAACTTTGGAAATTCCTGTGGCCCAAAAGGACAGTACAGGAACTTATAC 1553
||.|||||||||||.|||||.||||||||.||.||||||||.||||||||||||||.||||||||.||.|||||
Sbjct 1480 GACATTTATGTTTTGCATGATAATGGAACATTAGAAATTCCCGTGGCCCAAAAGGATAGTACAGGGACGTATAC 1553
Query 1554 GTGTGTTGCAAGGAATAAATTAGGGATGGCAAAGAATGAAGTTCACTTAGAAATCAAAGATGCTACATGGATCG 1627
.|||||.|||.||||||||.||||||||||||||||||||||||||||.||||||||||||.|.||..|||||.
Sbjct 1554 TTGTGTCGCACGGAATAAACTAGGGATGGCAAAGAATGAAGTTCACTTGGAAATCAAAGATCCAACCAGGATCA 1627
Query 1628 TTAAACAGCCCGAATATGCAGTTGTGCAAAGAGGGAGCATGGTGTCCTTTGAATGCAAAGTGAAACATGATCAC 1701
|||||||.||.||.||||||||.||.||.||.|||||||.|||||||||||||||||.||||||||||||.|||
Sbjct 1628 TTAAACAACCTGAGTATGCAGTCGTCCAGAGGGGGAGCAAGGTGTCCTTTGAATGCAGAGTGAAACATGACCAC 1701
Query 1702 ACCTT-ATCCCTCACTGTCCTGTGGCTGAAGGACAACAGGGAACTGCCCAGTGATGAAAGGTTCACTGTTGACA 1774
||||| ||||| |||..|..||||||||||||||||..|.||.|||||||.|||||||||||||.|...|||||
Sbjct 1702 ACCTTAATCCC-CACCATTATGTGGCTGAAGGACAATGGAGAGCTGCCCAATGATGAAAGGTTCTCCACTGACA 1774
Query 1775 AGGATCATCTAGTGGTAGCTGATGTCA---GTGACGATGACAGCGGGACCTACACGTGTGTGGCCAACACCACT 1845
||||||||||.||||||.|||||||.| .|||||||| ||||.||||||||||||..|||||||||.||.
Sbjct 1775 AGGATCATCTGGTGGTATCTGATGTAAAGGATGACGATG---GCGGAACCTACACGTGTACGGCCAACACAACG 1845
Query 1846 CTGGACAGCGTCTCCGCCAGCGCTGTGCTTAGCGTTGTTGATGTCCCAAATCCTCCCTTTGACTTAGAACTGAC 1919
||||||||.|..||.||||||||||||||.||.|||||.||||||||.||||||||||||||.||||||.||||
Sbjct 1846 CTGGACAGTGCTTCGGCCAGCGCTGTGCTCAGGGTTGTCGATGTCCCGAATCCTCCCTTTGATTTAGAATTGAC 1919
Query 1920 AGATCAACTTGACAAAAGTGTTCAGCTGTCATGGACCCCAGGCGATGACAACAATAGCCCCATTACAAAATTCA 1993
..||||||||||||||||||||||||||.||||||||||||||||.||||||||||||||||||||||||||||
Sbjct 1920 CAATCAACTTGACAAAAGTGTTCAGCTGACATGGACCCCAGGCGACGACAACAATAGCCCCATTACAAAATTCA 1993
Query 1994 TCATCGAATATGAAGATGCAATGCACAAGCCAGGGCTGTGGCACCACCAAACTGAAGTTTCTGGAACACAGACC 2067
||||.||.|||||||||||||||||..|..||||||||||||.||||||..|||||||||||||||||||||||
Sbjct 1994 TCATTGAGTATGAAGATGCAATGCATGATGCAGGGCTGTGGCGCCACCAGGCTGAAGTTTCTGGAACACAGACC 2067
Query 2068 ACAGCCCAGCTGAAGCTGTCTCCTTACGTGAACTACTCCTTCCGCGTGATGGCAGTGAACAGCATTGGGAAGAG 2141
||||||||.||||||||||||||.||.|||||||||||||||||.||.|||||||.||||||||||||||..||
Sbjct 2068 ACAGCCCAACTGAAGCTGTCTCCCTATGTGAACTACTCCTTCCGTGTCATGGCAGAGAACAGCATTGGGAGAAG 2141
Query 2142 CTTGCCCAGCGAGGCCTCTGAGCAGTATTTGACGAAAGCCTCAGAACCAGATAAAAACCCCACAGCTGTGGAAG 2215
..||||.||||||||.||.|||||||||.|.||.||||||.|||||||||||.|.||.||||..||||||||||
Sbjct 2142 TATGCCGAGCGAGGCATCCGAGCAGTATCTTACAAAAGCCGCAGAACCAGATCAGAATCCCATGGCTGTGGAAG 2215
Query 2216 GACT-GGGATCAGAGCCTGATAATTTGGTGATTACGTGGAAGCCCTTGAATGGTTTCGAATCTAATGGGCCAGG 2288
|||| |||| |||||||.||.||.|||||||||||.|||||||||.||||||||||..||||.||||||||.||
Sbjct 2216 GACTAGGGA-CAGAGCCGGACAACTTGGTGATTACATGGAAGCCCCTGAATGGTTTTCAATCGAATGGGCCTGG 2288
Query 2289 CCTTCAG-ACAA---GTACTGCCTCTTCT--------------------------------------------- 2313
|||.||| |||| |..|||.|.| |.
Sbjct 2289 CCTCCAGTACAAAGTGAGCTGGCGC--CAGAAAGATGGTGACGATGAGTGGACGTCTGTGGTTGTGGCCAATGT 2360
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 2361 ATCCAAATACATTGTTTCTGGCACACCAACCTTTGTCCCATACCTGATAAAAGTTCAAGCTCTGAATGATGTGG 2434
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 2435 GGTTTGCACCAGAGCCAGCTGCAGTCATGGGGCATTCTGGAGAAGACCTTCCAATGGTGGCTCCTGGAAATGTT 2508
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 2509 CGCGTCAGCGTGGTGAACAGTACGCTGGCAGAGGTGCACTGGGACCCAGTTCCTCCCAAGAGTGTCCGAGGACA 2582
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 2583 CTTACAAGGCTACCGGATTTACTACTGGAAGACCCAGAGCTCCTCTAAAAGAAACAGGCGCCACATTGAGAAGA 2656
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 2657 AGATCCTCACCTTCCAGGGCACCAAGACTCACGGCATGCTGCCAGGGCTGCAGCCATACAGTCACTATGCCCTC 2730
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 2731 AACGTCCGAGTGGTCAACGGGAAAGGGGAGGGCCCAGCCAGCACGGACAGAGGCTTCCATACACCGGAGGGAGT 2804
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 2805 CCCTAGTGCTCCCTCATCTTTGAAAATTGTTAATCCCACACTGGACTCCCTCACTTTGGAATGGGACCCCCCAA 2878
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 2879 GCCACCCAAATGGCATCCTGACTGAGTACATCTTACAATATCAGCCAATTAACAGCACACATGAGCTAGGCCCT 2952
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 2953 CTGGTAGATTTAAAAATTCCTGCCAACAAGACCCGCTGGACTTTGAAAAATTTAAATTTCAGCACTCGGTACAA 3026
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 3027 GTTCTATTTCTATGCACAGACATCAGTGGGGCCAGGCAGTCAGATCACAGAGGAAGCGATAACGACTGTGGACG 3100
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 3101 AAGGTAAGAAGGCAATGGCAAGCCGGCAAGTGGATATCGCGACCCAAGGCTGGTTCATAGGTCTAATGTGCGCT 3174
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 3175 GTTGCTCTCCTCATCTTAATTTTGCTGATTGTTTGCTTCATCAGAAGAAACAAAGGTGGTAAATACCCAGTTAA 3248
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 3249 AGAAAAGGAGGATGCTCATGCAGACCCTGAAATCCAGCCCATGAAGGAAGATGATGGGACGTTTGGAGAATACA 3322
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 3323 GTGATGCAGAAGATCACAAGCCTTTGAAAAAAGGAAGTCGAACACCTTCAGACAGGACTGTGAAAAAAGAAGAT 3396
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 3397 AGCGATGATAGTCTGGTTGACTATGGAGAGGGGGTGAACGGCCAATTCAACGAGGATGGCTCCTTTATTGGCCA 3470
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 3471 ATACAGTGGTAAGAAAGAGAAAGAGCCAGCAGAGGGAAATGAAAGCTCAGAGGCCCCTTCTCCTGTCAACGCAA 3544
Query 2314 -------------- 2313
Sbjct 3545 TGAACTCCTTTGTT 3558
