Nucleotide Global Alignment
Description
- Query:
- TRCN0000480349
- Subject:
- XR_001754787.2
- Aligned Length:
- 5432
- Identities:
- 2101
- Gaps:
- 3329
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGGCTGGCAGCCCCACCCTAACGAGAAGTGAAGGGGCTGGGCATGCTGTTTCCAGTGCTTTCATGAGATGCTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTTTGCCTGGCGGTCGGGCCTGATGTCTCGTTGTTCCACCTGTGACCAAGGGGTCCCTCTGGAAATGTGTGTGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACTGACACATGCCCTGGTGGCTCTTGTCTGATCCATGTCCAGGTTATTCCTGCCTGACCGTCACTCGTGCCAGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGCCCAACACAAATTCAGGCACAAATTCAGTACACCACACAATGGGGGAAACATGTTCAAAGATTTTTACTTAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGGTCCTGAGCAGGGAGGGTGCCATGAGTCAGGAGGGCAGTCCTCTGTCCCTGGGTCATGCAAGCAGGAACAAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGGTCAGGCAGAGAGAGAGAGCACTGCAGCCAACCAGCAGAACAAATAAGGGAGTAGGGTGGGGTCACTTGAAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGTGTGGGCAGGTGCCTGAGTGAAAGATGCCTCTAGGTTCTCATCTCTGGTACTGGCTTGAGCCACTGGGTGTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GTGTAGAACTACAAAGTGTCAGGGGTGGCTGAACTCTGCCGCTACTAGGAGAAAGTGCAGCTCATATTCCAGAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGATGCTGAGGCAATAGAAAATGAAAAGAATTCACTATGCTTACGCAGAGTGTGTCTGGACACACACAAATTTA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGAGTAATAAGAATTGCTTAATATGGCATAATTTCCTTAGGTGCCATGTGCAGTTGTCACAAGCATTGCACTAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTGGAATAATGAATTAGAAAGTGGATGTTGGTCATTATTAGGAAAAGGTACTTTGTTACACGAGACAGTAATTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CATTGTGGCAAGAGAAAGAATCTGACTAATTAATTTGTCTTTTTTTTCTTTTGCCTATGAGTGCTTCTTCTGCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGACTCCTCCCCATAATCGGACTCCTTCCAAGACAGCCTAATCTTCAGGGCATTTGGATGCAGCTGCCTTTTGT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TCCAGAGACACAGGCCATCTCAGGGGAGGTATCTCCCTGGGGCCTGAACAGCGTTTTTCTAGACAAGAGGAGGC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGAGGGCTGTGGGTTCTGCTTTGCCAGCCCTGAATGCTGGATCCCGAGTGGCAGAGGCACCAAGTGCTGTATGA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGTGTGTATGTGATGTGTGTGCATGTACATGTGTGTGATGTGTGTCCCTGCTCGCCCCAGGCTGGCCATGGTAC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGTGCTAGTCACAGACTGGCTGTGCTGATCAAGCCAGGCACAGTGGAAAATGGGAAGATGTTGGCGTTTGCCCC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCCCTTGGCTGTGTGTCATTCACCTGGGGCATGAGCTGTGCCCCTGCTCTGCAGTAATGAACAAGGCAGGTCAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CATTGGTCCGAGACACGTGAGTTAAGAGAGGAGGAAGAGCACTCTCTGGGGGCGGGGGGATCCATTTGTCAGTG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCCTGCAGTTTCCTGTCCCAGGGATTTCACTGGTGACATCCTGACCACTCACCTGCACTTTATATGGAGCTGTT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TTCATCAGCTGGCGTCTGCTGAGCCTCTGCATTGTGTTGTGTGGTAGCCTGTTACTTTTTGCAGTTTTATTTTC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TAAACTGTACTCTTTTATTGATAGATTTTTTGTATTAGGATTTCCATTTAAACAGGACTTTGGTACGTCTGCTG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGGGAGATTTGTTTCCCTAGAAGATTCACGGCTGTCGTTCTCTCCCCTCTGCTCGTGGTGTTTTACTGTGACTG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CGCTGAACGGTTAGCTGTCACATGTCATTCTCTGGGTGGTGTGCTCTGAAGTCATTGTGGTGTGTGGGCCCCTT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CAGCCTAGTTCTGCCTAACTGCGGCATGATGAATGGGCCCGAGGCAGAGGAGGAGGCTCCCTCGTCGGTAGGGG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CTGCTGTTGTCGCAGCTGCCGGCACACGGAAGTGAGTCGGTGTGCTGCTGCCCCGAGTGACTGAGGGACAGAAT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GAGGCTGGGGCCGGCCGGACTGGCATTGGCGTGTCTGCATGGCGTCGTCCACCACTGGGCCTTTGCACATGGGG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ACCTTTTTCAGCATCATGGGGCGTCGGTATAAAAGGAGGCGCAAGAAGCGCTCTGAGAGGAAAGACAGAAACAG 2072
Query 1 -------------------------------------ATGGATATAGAAGATGAAGAAAACATGAGTTCCAGCA 37
|||||||||||||||||||||||||||||||||||||
Sbjct 2073 TCTCCGCCAGTCAAGAAACCCTCAAAAGTATTTTGCCATGGATATAGAAGATGAAGAAAACATGAGTTCCAGCA 2146
Query 38 GCACTGATGTGAAGGAAAACCGCAATCTGGACAACGTGTCCCCCAAGGATGGCAGCACACCTGGGCCTGGCGAG 111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 GCACTGATGTGAAGGAAAACCGCAATCTGGACAACGTGTCCCCCAAGGATGGCAGCACACCTGGGCCTGGCGAG 2220
Query 112 GGCTCTCAGCTCTCCAATGGGGGTGGTGGTGGCCCCGGCAGAAAGCGGCCCCTGGAGGAGGGCAGCAATGGCCA 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 GGCTCTCAGCTCTCCAATGGGGGTGGTGGTGGCCCCGGCAGAAAGCGGCCCCTGGAGGAGGGCAGCAATGGCCA 2294
Query 186 CTCCAAGTACCGCCTGAAGAAAAGGAGGAAAACACCAGGGCCCGTCCTCCCCAAGAACGCCCTGATGCAGCTGA 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 CTCCAAGTACCGCCTGAAGAAAAGGAGGAAAACACCAGGGCCCGTCCTCCCCAAGAACGCCCTGATGCAGCTGA 2368
Query 260 ATGAGATCAAGCCTGGTTTGCAGTACACACTCCTGTCCCAGACTGGGCCCGTGCACGCGCCTTTGTTTGTCATG 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 ATGAGATCAAGCCTGGTTTGCAGTACACACTCCTGTCCCAGACTGGGCCCGTGCACGCGCCTTTGTTTGTCATG 2442
Query 334 TCTGTGGAGGTGAATGGCCAGGTTTTTGAGGGCTCTGGTCCCACAAAGAAAAAGGCAAAACTCCATGCTGCTGA 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 TCTGTGGAGGTGAATGGCCAGGTTTTTGAGGGCTCTGGTCCCACAAAGAAAAAGGCAAAACTCCATGCTGCTGA 2516
Query 408 GAAGGCCTTGAGGTCTTTCGTTCAGTTTCCTAATGCCTCTGAGGCCCACCTGGCCATGGGGAGGACCCTGTCTG 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 GAAGGCCTTGAGGTCTTTCGTTCAGTTTCCTAATGCCTCTGAGGCCCACCTGGCCATGGGGAGGACCCTGTCTG 2590
Query 482 TCAACACGGACTTCACATCTGACCAGGCCGACTTCCCTGACACGCTCTTCAATGGTTTTGAAACTCCTGACAAG 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 TCAACACGGACTTCACATCTGACCAGGCCGACTTCCCTGACACGCTCTTCAATGGTTTTGAAACTCCTGACAAG 2664
Query 556 GCGGAGCCTCCCTTTTACGTGGGCTCCAATGGGGATGACTCCTTCAGTTCCAGCGGGGACCTCAGCTTGTCTGC 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 GCGGAGCCTCCCTTTTACGTGGGCTCCAATGGGGATGACTCCTTCAGTTCCAGCGGGGACCTCAGCTTGTCTGC 2738
Query 630 TTCCCCGGTGCCTGCCAGCCTAGCCCAGCCTCCTCTCCCTGCCTTACCACCATTCCCACCCCCGAGTGGGAAGA 703
|||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||
Sbjct 2739 TTCCCCGGTGCCTGCCAGCCTAGCCCAGCCTCCTCTCCCTGTCTTACCACCATTCCCACCCCCGAGTGGGAAGA 2812
Query 704 ATCCCGTGATGATCTTGAACGAACTGCGCCCAGGACTCAAGTATGACTTCCTCTCCGAGAGCGGGGAGAGCCAT 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 ATCCCGTGATGATCTTGAACGAACTGCGCCCAGGACTCAAGTATGACTTCCTCTCCGAGAGCGGGGAGAGCCAT 2886
Query 778 GCCAAGAGCTTCGTCATGTCTGTGGTCGTGGATGGTCAGTTCTTTGAAGGCTCGGGGAGAAACAAGAAGCTTGC 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 GCCAAGAGCTTCGTCATGTCTGTGGTCGTGGATGGTCAGTTCTTTGAAGGCTCGGGGAGAAACAAGAAGCTTGC 2960
Query 852 CAAGGCCCGGGCTGCGCAGTCTGCCCTGGCCGCCATTTTTAACTTGCACTTGGATCAGACGCCATCTCGCCAGC 925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 CAAGGCCCGGGCTGCGCAGTCTGCCCTGGCCGCCATTTTTAACTTGCACTTGGATCAGACGCCATCTCGCCAGC 3034
Query 926 CTATTCCCAGTGAGGGTCTTCAGCTGCATTTACCGCAGGTTTTAGCTGACGCTGTCTCACGCCTGGTCCTGGGT 999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035 CTATTCCCAGTGAGGGTCTTCAGCTGCATTTACCGCAGGTTTTAGCTGACGCTGTCTCACGCCTGGTCCTGGGT 3108
Query 1000 AAGTTTGGTGACCTGACCGACAACTTCTCCTCCCCTCACGCTCGCAGAAAAGTGCTGGCTGGAGTCGTCATGAC 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3109 AAGTTTGGTGACCTGACCGACAACTTCTCCTCCCCTCACGCTCGCAGAAAAGTGCTGGCTGGAGTCGTCATGAC 3182
Query 1074 AACAGGCACAGATGTTAAAGATGCCAAGGTGATAAGTGTTTCTACAGGAACAAAATGTATTAATGGTGAATACA 1147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3183 AACAGGCACAGATGTTAAAGATGCCAAGGTGATAAGTGTTTCTACAGGAACAAAATGTATTAATGGTGAATACA 3256
Query 1148 TGAGTGATCGTGGCCTTGCATTAAATGACTGCCATGCAGAAATAATATCTCGGAGATCCTTGCTCAGATTTCTT 1221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3257 TGAGTGATCGTGGCCTTGCATTAAATGACTGCCATGCAGAAATAATATCTCGGAGATCCTTGCTCAGATTTCTT 3330
Query 1222 TATACACAACTTGAGCTTTACTTAAATAACAAAGATGATCAAAAAAGATCCATCTTTCAGAAATCAGAGCGAGG 1295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331 TATACACAACTTGAGCTTTACTTAAATAACAAAGATGATCAAAAAAGATCCATCTTTCAGAAATCAGAGCGAGG 3404
Query 1296 GGGGTTTAGGCTGAAGGAGAATGTCCAGTTTCATCTGTACATCAGCACCTCTCCCTGTGGAGATGCCAGAATCT 1369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3405 GGGGTTTAGGCTGAAGGAGAATGTCCAGTTTCATCTGTACATCAGCACCTCTCCCTGTGGAGATGCCAGAATCT 3478
Query 1370 TCTCACCACATGAGCCAATCCTGGA------------------------------------------------- 1394
|||||||||||||||||||||||||
Sbjct 3479 TCTCACCACATGAGCCAATCCTGGAAGGGTCTCGCTCTTACACCCAGGCTGGAGTGCAGTGGTGCAATCATGGC 3552
Query 1395 -----------------------------------------------------------------------AGA 1397
|||
Sbjct 3553 TCACTGCAGCCTCGACCTCCTGGGCTCTTAAGCGATCCTTCCACCTCAACCTTCCAAGGAGCTGGGACTACAGA 3626
Query 1398 ACCAGCAGATAGACACCCAAATCGTAAAGCAAGAGGACAGCTACGGACCAAAATAGAGTCTGGTGAGGGGACGA 1471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3627 ACCAGCAGATAGACACCCAAATCGTAAAGCAAGAGGACAGCTACGGACCAAAATAGAGTCTGGTGAGGGGACGA 3700
Query 1472 TTCCAGTGCGCTCCAATGCGAGCATCCAAACGTGGGACGGGGTGCTGCAAGGGGAGCGGCTGCTCACCATGTCC 1545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3701 TTCCAGTGCGCTCCAATGCGAGCATCCAAACGTGGGACGGGGTGCTGCAAGGGGAGCGGCTGCTCACCATGTCC 3774
Query 1546 TGCAGTGACAAGATTGCACGCTGGAACGTGGTGGGCATCCAGGGATCCCTGCTCAGCATTTTCGTGGAGCCCAT 1619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3775 TGCAGTGACAAGATTGCACGCTGGAACGTGGTGGGCATCCAGGGATCCCTGCTCAGCATTTTCGTGGAGCCCAT 3848
Query 1620 TTACTTCTCGAGCATCATCCTGGGCAGCCTTTACCACGGGGACCACCTTTCCAGGGCCATGTACCAGCGGATCT 1693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3849 TTACTTCTCGAGCATCATCCTGGGCAGCCTTTACCACGGGGACCACCTTTCCAGGGCCATGTACCAGCGGATCT 3922
Query 1694 CCAACATAGAGGACCTGCCACCTCTCTACACCCTCAACAAGCCTTTGCTCAGTGGCATCAGCAATGCAGAAGCA 1767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3923 CCAACATAGAGGACCTGCCACCTCTCTACACCCTCAACAAGCCTTTGCTCAGTGGCATCAGCAATGCAGAAGCA 3996
Query 1768 CGGCAGCCAGGGAAGGCCCCCAACTTCAGTGTCAACTGGACGGTAGGCGACTCCGCTATTGAGGTCATCAACGC 1841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3997 CGGCAGCCAGGGAAGGCCCCCAACTTCAGTGTCAACTGGACGGTAGGCGACTCCGCTATTGAGGTCATCAACGC 4070
Query 1842 CACGACTGGGAAGGATGAGCTGGGCCGCGCGTCCCGCCTGTGTAAGCACGCGTTGTACTGTCGCTGGATGCGTG 1915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4071 CACGACTGGGAAGGATGAGCTGGGCCGCGCGTCCCGCCTGTGTAAGCACGCGTTGTACTGTCGCTGGATGCGTG 4144
Query 1916 TGCACGGCAAGGTTCCCTCCCACTTACTACGCTCCAAGATTACCAAACCCAACGTGTACCATGAGTCCAAGCTG 1989
||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||
Sbjct 4145 TGCACGGCAAGGTTCCCTCCCACTTACTACGCTCCAAGATTACCAAGCCCAACGTGTACCATGAGTCCAAGCTG 4218
Query 1990 GCGGCAAAGGAGTACCAGGCCGCCAAGGCGCGTCTGTTCACAGCCTTCATCAAGGCGGGGCTGGGGGCCTGGGT 2063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4219 GCGGCAAAGGAGTACCAGGCCGCCAAGGCGCGTCTGTTCACAGCCTTCATCAAGGCGGGGCTGGGGGCCTGGGT 4292
Query 2064 GGAGAAGCCCACCGAGCAGGACCAGTTCTCACTCACGCCC---------------------------------- 2103
||||||||||||||||||||||||||||||||||||||||
Sbjct 4293 GGAGAAGCCCACCGAGCAGGACCAGTTCTCACTCACGCCCTGACCCGGGCAGACATGATGGGGGGTGCAGGGGG 4366
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 4367 CTGTGGGCATCCAGCGTCATCCTCCAGAACCTCACATCTGAACTGGGGGCAGGTACACTGAGGAGGGGACGGCT 4440
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 4441 CCGTCTTCACATTGTGCACAGATCTGAGGATGGGATTAGCGAAGCTGTGGAGACTGCACATCCGGACCTGCCCA 4514
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 4515 TGTCTCAAAACAAACACATGTACAGTGGCTCTTTTTCCTTCTCAAACACTTTACCCCAGAAGCAGGTGGTCTGC 4588
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 4589 CCCAGGCATAAAGAAGGAAAATTGGCCATCTTTCCCACCTCTAAATTCTGTAAAATTATAGACTTGCTCAAAAG 4662
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 4663 ATTCCTTTTTATCATCCCCACGCTGTGTAAGTGGAAAGGGCATTGTGTTCCGTGTGTGTCCAGTTTACAGCGTC 4736
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 4737 TCTGCCCCCTAGCGTGTTTTGTGACAATCTCCCTGGGTGAGGAGTGGGTGCACCCAGCCCCGAGGCCAGTGGTT 4810
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 4811 GCTCGGGGCCTTCCGTGTGAGTTCTAGTGTTCACTTGATGCCGGGGAATAGAATTAGAGAAAACTCTGACCTGC 4884
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 4885 CGGGTTCCAGGGACTGGTGGAGGTGGATGGCAGGTCCGACTCGACCATGACTTAGTTGTAAGGGTGTGTCGGCT 4958
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 4959 TTTTCAGTCTCATGTGAAAATCCTCCTGTCTCTGGCAGCACTGTCTGCACTTTCTTGTTTACTGTTTGAAGGGA 5032
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 5033 CGAGTACCAAGCCACAAGAACACTTCTTTTGGCCACAGCATAAGCTGATGGTATGTAAGGAACCGATGGGCCAT 5106
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 5107 TAAACATGAACTGAACGGTTAAAAGCACAGTCTATGGAACGCTAATGGAGTCAGCCCCTAAAGCTGTTTGCTTT 5180
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 5181 TTCAGGCTTTGGATTACATGCTTTTAATTTGATTTTAGAATCTGGACACTTTCTATGAATGTAATTCGGCTGAG 5254
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 5255 AAACATGTTGCTGAGATGCAATCCTCAGTGTTCTCTGTATGTAAATCTGTGTATACACCACACGTTACAACTGC 5328
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 5329 ATGAGCTTCCTCTCGCACAAGACCAGCTGGAACTGAGCATGAGACGCTGTCAAATACAGACAAAGGATTTGAGA 5402
Query 2104 ------------------------------ 2103
Sbjct 5403 TGTTCTCAATAAAAAGAAAATGTTTCACTA 5432
