Nucleotide Global Alignment

Description

Query:
TRCN0000480412
Subject:
XR_001740350.2
Aligned Length:
4926
Identities:
1073
Gaps:
3812

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CCCCGTGCCGAGTTTCCTGTTTAAGATGGCGTCCCCCGTAGCAGCGCAGGCCGGGAAGCTTCTGCGAGCCCTAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CGCTGCGGCCCCGCTTCCTGGCGGCCGGGTCCCAGGCAGTTCAATTAACCTCCAGAAGATGGCTGAACCTGCAG  148

Query    1  ---------------------ATGTCTGACAACGGAGTGAGAGTTCAAAGATTCTTTGTAGCAGACACTGCAAA  53
                                 |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GAATACCAGAGCAAGAAACTGATGTCTGACAACGGAGTGAGAGTTCAAAGATTCTTTGTAGCAGACACTGCAAA  222

Query   54  TGAAGCTCTCGAGGCTGCTAAGAGACTAAATGCAAAAGAAATTGTTTTAAAAGCCCAGATCTTAGCTGGAGGAA  127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TGAAGCTCTCGAGGCTGCTAAGAGACTAAATGCAAAAGAAATTGTTTTAAAAGCCCAGATCTTAGCTGGAGGAA  296

Query  128  GAGGAAAAGGTGTCTTCAATAGTGGTTTGAAAGGAGGTGTTCATTTAACAAAAGACCCTAATGTTGTGGGACAG  201
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GAGGAAAAGGTGTCTTCAATAGTGGTTTGAAAGGAGGTGTTCATTTAACAAAAGACCCTAATGTTGTGGGACAG  370

Query  202  CTGGCTAAACAGATGATTGGGTACAATCTAGCGACAAAACAAACTCCAAAAGAAGGTGTGAAAGTTAACAAGGT  275
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CTGGCTAAACAGATGATTGGGTACAATCTAGCGACAAAACAAACTCCAAAAGAAGGTGTGAAAGTTAACAAGGT  444

Query  276  GATGGTTGCTGAAGCCTTGGATATTTCCAGAGAAACCTACCTGGCAATTCTGATGGACCGGTCCTGCAATGGCC  349
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GATGGTTGCTGAAGCCTTGGATATTTCCAGAGAAACCTACCTGGCAATTCTGATGGACCGGTCCTGCAATGGCC  518

Query  350  CCGTGCTGGTGGGCAGCCCCCAGGGGGGCGTCGACATTGAAGAGGTGGCTGCTTCAAACCCGGAGCTCATTTTT  423
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CCGTGCTGGTGGGCAGCCCCCAGGGGGGCGTCGACATTGAAGAGGTGGCTGCTTCAAACCCGGAGCTCATTTTT  592

Query  424  AAGGAGCAAATTGACATTTTTGAAGGAATAAAGGACAGCCAAGCTCAGCGGATGGCCGAAAATCTAGGCTTCGT  497
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  AAGGAGCAAATTGACATTTTTGAAGGAATAAAGGACAGCCAAGCTCAGCGGATGGCCGAAAATCTAGGCTTCGT  666

Query  498  TGGGCCTTTGAAAAGCCAGGCTGCAGATCAAATTACGAAGCTGTATAATCTCTTCCTGAAAATTGATGCTACTC  571
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TGGGCCTTTGAAAAGCCAGGCTGCAGATCAAATTACGAAGCTGTATAATCTCTTCCTGAAAATTGATGCTACTC  740

Query  572  AGGTGGAAGTGAATCCCTTTGGTGAAACTCCAGAAGGACAAGTTGTCTGTTTTGATGCCAAGATAAACTTTGAT  645
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AGGTGGAAGTGAATCCCTTTGGTGAAACTCCAGAAGGACAAGTTGTCTGTTTTGATGCCAAGATAAACTTTGAT  814

Query  646  GACAACGCAGAATTCCGACAAAAAGACATATTTGCTATGGACGACAAATCAGAGAATGAGCCCATTGAAAATGA  719
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GACAACGCAGAATTCCGACAAAAAGACATATTTGCTATGGACGACAAATCAGAGAATGAGCCCATTGAAAATGA  888

Query  720  AGCTGCCAAATATGATCTAAAATACATAGGACTAGATGGGAACATTGCCTGCTTTGTGAATGGTGCTGGGCTCG  793
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AGCTGCCAAATATGATCTAAAATACATAGGACTAGATGGGAACATTGCCTGCTTTGTGAATGGTGCTGGGCTCG  962

Query  794  CCATGGCTACTTGTGATATCATTTTCCTTAATGGTGGGAAGCCAGCCAACTTCTTGGATCTTGGAGGTGGTGTA  867
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CCATGGCTACTTGTGATATCATTTTCCTTAATGGTGGGAAGCCAGCCAACTTCTTGGATCTTGGAGGTGGTGTA  1036

Query  868  AAGGAAGCTCAAGTATATCAAGCATTCAAATTGCTCACAGCTGATCCTAAG--------GTTGAA---------  924
            |||||||||||||||||||||||||||||||||||||||||||||||||||        .|||||         
Sbjct 1037  AAGGAAGCTCAAGTATATCAAGCATTCAAATTGCTCACAGCTGATCCTAAGCAGCAAAATTTGAAAGCAAGAAA  1110

Query  925  ------GCCATC--------------------------------CTTGTCAATA-----TATTTGG---TGGTA  952
                  |.||.|                                ||||..||||     .||.|||   |||  
Sbjct 1111  TACTTGGGCACCAGAATACAGGACTCAGAAGCACGTTCTTGAAGCTTGGAAATAGGACCAATATGGAGCTGG--  1182

Query  953  TCGTCAACT-GTGCCATCAT-TGCCAATGGGA-TCAC--------CAAAGCCTGCC---GGGAGCTAGAAC---  1009
                 |||| .||.| |||| |     ||||| ||.|        .|.||.|||||   ||||| |.||||   
Sbjct 1183  -----AACTCCTGAC-TCATCT-----TGGGAGTCTCTGATTATAGAGAGACTGCCAGAGGGAG-TGGAACGAA  1244

Query 1010  --------TCAAGGTGCCCCTG----------GTGGTCCGGCTTGAA-GGAA----------CCAAC-------  1047
                    |.|..||.||||||          |.||| |..|.|||| ||||          |||.|       
Sbjct 1245  CATGGACTTTACAGTTCCCCTGACTGCTTTCAGAGGT-CAACCTGAATGGAAACTTGACTCTCCATCAAGTTAC  1317

Query 1048  -GTCCAAGAGGCCCAGAAGATACTCAACAACAGCGGAC---TCC---CCATTACTTCAG---------------  1099
             |||       ||||||.||| |||..||..||..|.|   |||   |.||.|.|||||               
Sbjct 1318  TGTC-------CCCAGAGGAT-CTCTCCATAAGATGTCGTTTCCATGCTATCAGTTCAGAGAAGTTGGAATAAA  1383

Query 1100  ---------------CCATTGACCTG----GAGGATGCAGCCAA--------------GAAGGCTGTGGCCAGT  1140
                           |.|||||  ||    .|..||||  ||||              .||||.|||      |
Sbjct 1384  ATGGTTGGTTCATCTCAATTGA--TGAATTTAAAATGC--CCAAATCTTGTTTTGTATTAAGGGTGT------T  1447

Query 1141  GTGGCCAAGAAG--------------------------------------------------------------  1152
            ||     |.|||                                                              
Sbjct 1448  GT-----ATAAGACATTTCCTTTTGATTCTGAGATTTTCAGGCAGGATCGTGGACTCACTAAAATTATTTCTTT  1516

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 1517  TTTCCTTGGAAGAAATTAAAAGGGCAGAGTGGGAGGGTATCTTTCGAGGAATGCTGTTTTTCACATGTCAGTTT  1590

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 1591  TAGCTATTTTGGAGGTACATGAGTTGCTTTATTCCAAGGATCCTGGCATTTGAAGTCACACAAAAGAAAATAAT  1664

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 1665  TTCAAACTCCAAGAATATACCAAAGGTAGAAAAGTGAGCCTGAGCAGCTTGCCATAATTTCAGCAGAAGGCAAA  1738

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 1739  TCTGGTCCCAATCGAACCAATCTGTTGGTTTATTTGTATTATTACAACAAAGCCCAAGATTGAATTCCTCACCT  1812

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 1813  GAATCACTTCCTTATTGACTGAATCTATTTAGACTCCCCTCTAATTTAGCAGAGTATTTTTTATTAAATCCAGG  1886

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 1887  CATACAAACATCAATTATCCAAGCTGCATCTCATTTCCTTCACCATTTATTTTCCTTCGTTGGCTGCCAGTGGA  1960

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 1961  TTAGAAGACATGATTAGAATTCATCAGGAAAATAAAAACAACAAAAAAGAAAAACAGTTTCACAAAAACAGATG  2034

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 2035  CTTAAACAAGAGCAACAACATTCAGAATTAAAATAACCTGTGATTTTTTTAAAAAAGTCCTTATCTTGGCTAAT  2108

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 2109  ATAAACATGCTTGCTTGATTTTTATCAACCTCATGCCTGCTACAGTGGGACTAAATTAGCATTCGTGATTGGAA  2182

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 2183  TAGGCACAGACAAAACCTAATAGTTGCACTTACTGTGCTTCACGTATATGCTACAGTGTTTTTAAATACAATGC  2256

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 2257  AGTACTTAACTATTTGCAATAACCTTTGCAAAGTAGCTGGCTTACTCTGAAAGTTTTCTATTTTTTCACTTCCA  2330

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 2331  ACCAATGTCAGGGAGGAAAAAAGAACAAAACAGAGACTTTCCTTCTATGAACTTGTTAAAGGTAACAGGTTTTG  2404

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 2405  TTTTAAAGGAATGTTATTAAAGTTGGACTCCTTTATGTAATTGGCCACCACTACTGCCTGGGTACCTTTGTGTT  2478

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 2479  ATCAGTGATGGCAAGAAAATAACACAACAAAGAAAGACAACGTAATGTCTGAAAAGTGTTATCAAAGATATATC  2552

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 2553  AAGTGACATGAAGAAGGAGGGGTGATGGTATACTTGCCATGAATTTGAGGGGAAATGAACCAAATCACATCTGT  2626

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 2627  GTCAGGTTAGCAAACTATGACCTGTGGGCCAAATCTGGCTCACCGCTTGTTGTTGTAAATAAAGTTTTATTGGA  2700

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 2701  ATACACCATGCTTATTTACTTATATATTGTTTGTCTATGATTGCTTTCATGCTGCAACAAGGGTAAGTAGTTGT  2774

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 2775  GACAGAGACGGGCTCAAAAAACCTAAAATATATACTGATAGAGCTCTTAAAAGCAAGATGTTGTCGATCCCTGG  2848

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 2849  TGAATGTCAGTGGCTCCTTTATCATTATCCAGCTATTCCTAACTGCCCTGCATGTGCTGTGGTGAAACAGTGTT  2922

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 2923  GGTTTGAACTGTAACTGCTTAATAGCTAGGAAACCCTAAATTTTCTGAGACTCAGTTTATCTATAAAATGAAGG  2996

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 2997  TTAAAAATACATTTATAAGCTTATTGTAAATTCATTGTAGATGCTCAATAAATGTTAATTTCCTTCCTGACCTT  3070

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 3071  ACTGTAGTCTGTGTAGGTGTCTCAAAACCAAAGGCTTCTCAAACTCTTTGTCATGGCGTTTGCTCTGTGAGACT  3144

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 3145  CTGCATGATTTGCGAGGGGGCCCATCTTGTTTCCATCACTCTACTTCTCAGGCCCCAGGGACCTGATACTCCAG  3218

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 3219  ATTCTGTTCAGTTTCTCAAATGCACCACACTCTTTTCTGTTCCTCCACCTGTATACATGGTATTCTGTTGTCTT  3292

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 3293  AAGATACTTTTCTCCCTCTCTTAATCTTGATCTACCTGCCCTCTTCCCAACTGCCCTTCAGACTCTAGCTTAAA  3366

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 3367  TGTCTCTGCCTATGAGAGGCCCTCCCTCACCACCTGGTGTAATATAGGTCCTGTCCTGCTACTCACATAGGACC  3440

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 3441  TAGCATTTTCCTCCCCTTCATAACTATTATCGTGGTTTGCAGTTTTAGATATATAGAACCTTTTTGTCTAATTT  3514

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 3515  TAAAATCTTTCTTGCTGGCTTAGCTACTGCCTACAAGCACAGGGCACATAGTAGGCCGTGAAGAATATATATTA  3588

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 3589  AATTAATAACTTTTTATTGAGCAGTCTTGCAATATTTTTATTTCATTAAGGGGACTCAGGATCATGTTGAATAA  3662

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 3663  AAAGAGCTGAATTTTTTAGACTGACAGCAAACAGGCTGCCTAATTTGGCACAATTTGTTTCTACCTCTGAGTCT  3736

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 3737  TGGTTTTCTCATCTGCGAAAGGGGGGTAGGTAATATCTGTCTCACAAGTATATGGCAGAGTTGGTTGTGGTAAT  3810

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 3811  GAACACAAAGAGACTAAGCCATCACTCATTGTAGGGCTTCTCTAGGTTTGCTGGCTTGGAAGGATATTTGACAG  3884

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 3885  TAGATAAAGCTGTAACCCCTGATTCTCCCAGATCTTCACCTCAATTTGGGGATGATTATACCCACCTCCTGTGA  3958

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 3959  TACTCATGTGTTAAATGCGTTAGTACATATACAATAATTAGAATACTGAGTACAACCTGCTAAATGCTTTAGTA  4032

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 4033  ACGTTAATTATGGTTGTATTTGTGATAGCTATTCATATATCAACTCTAGAGGATTATGTACACTTTGCCCAGAA  4106

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 4107  AAATACACATTCAGACAAAAATTCTGTGGACAGCTGCGAAGAATTCACTATTCCTCTGAAACTCATAGCCCTCT  4180

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 4181  CCTGAATACATATGGTGTGCACTAACACTTGCCATTATCTGAAACTCATAGCCCTATCCTGAATGCATATGCTG  4254

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 4255  TAGGTTACCACTTGCCATTGGAGGTCTTGGAGGCCATATCCTGTAGGAGCAGGGTAGCCATGGGACTTAACTAC  4328

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 4329  TATTATCCCCCAAAAATGTTGTGTTTGTGAATTCACCTGACTGAGGAATCCCTAATATTCATCAGATATTCAAA  4402

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 4403  AGGATCCATGTTCCAAAGAAGAGGTTTAGTATTGATTTTTGTTGGTTTGTTTATTTGAGCAGTGGGGATGATGT  4476

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 4477  CAAAAGAAGCTTGATAAATAGCAAGGGCTGTAGCTGTTCTTTTTTCAAAGTTTAGTTTTTACTTTTAATTGTGT  4550

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 4551  ACTAAAATCTGCAGCTAGAGTGTGTTTTGCAAAGCAAAACACCCAGACATTTGAAAAACTTGTGTATGGACTGC  4624

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 4625  CTGACCACCTGCACAGCTGCCAGAGCAAACTTGCCTTGGGATCAGCTGTCTGGGGTCTGGGGACCCGGGCCCTG  4698

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 4699  TATCTGGCACTTCAACTGCCTCATTAGATGATCTTTACTTTTGTAAAACAGTAAATAGCAACCCTCATAATTCT  4772

Query 1153  --------------------------------------------------------------------------  1152
                                                                                      
Sbjct 4773  CACCCGAGAATTAGAAAAAGCCTCTGTTCCCAAAAGCACTTGGGATCTTCCGGGAGAGTCTCTGGTTACTTAAA  4846

Query 1153  ------------------------------------------  1152
                                                      
Sbjct 4847  TAGACCTAACACTGAATTCTTAAAAAAAAAAAAAAAAAAAAA  4888

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