Nucleotide Global Alignment

Description

Query:
TRCN0000480493
Subject:
NR_159805.1
Aligned Length:
2999
Identities:
1440
Gaps:
1559

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTAGTTGATCTCCGGAGTTTCGCCATGCGGAACTTGGGGGCTTTCGCGGCCCGCGTCGGTGCGGAGTAGCTGCT  74

Query    1  --------------------------------------------------------------------ATGAGG  6
                                                                                ||||||
Sbjct   75  TTAGCCCCGACCAAACCGTCCTCTACAGCCTCCTGGCCCCGGCGCAGGCTGCCCGTACTGCCCGTGGCATGAGG  148

Query    7  GAGCCGGAAGAGCTGATGCCCGATTCGGGTGCTGTGTTTACATTTGGGAAAAGTAAATTTGCTGAAAATAATCC  80
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GAGCCGGAAGAGCTGATGCCCGATTCGGGTGCTGTGTTTACATTTGGGAAAAGTAAATTTGCTGAAAATAATCC  222

Query   81  CGGTAAATTCTGGTTTAAAAATGATGTCCCTGTACATCTTTCATGTGGAGATGAACATTCTGCTGTTGTTACCG  154
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CGGTAAATTCTGGTTTAAAAATGATGTCCCTGTACATCTTTCATGTGGAGATGAACATTCTGCTGTTGTTACCG  296

Query  155  GAAATAATAAACTTTACATGTTTGGCAGTAACAACTGGGGTCAGTTAGGATTAGGATCAAAGTCAGCCATCAGC  228
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GAAATAATAAACTTTACATGTTTGGCAGTAACAACTGGGGTCAGTTAGGATTAGGATCAAAGTCAGCCATCAGC  370

Query  229  AAGCCAACATGTGTCAAAGCTCTAAAACCTGAAAAAGTGAAATTAGCTGCCTGTGGAAGGAACCACACCCTGGT  302
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AAGCCAACATGTGTCAAAGCTCTAAAACCTGAAAAAGTGAAATTAGCTGCCTGTGGAAGGAACCACACCCTGGT  444

Query  303  GTCAACAGAAGGAGGCAATGTATATGCAACTGGTGGAAATAATGAAGGACAGTTGGGGCTTGGTGACACCGAAG  376
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GTCAACAGAAGGAGGCAATGTATATGCAACTGGTGGAAATAATGAAGGACAGTTGGGGCTTGGTGACACCGAAG  518

Query  377  AAAGAAACACTTTTCATGTAATTAGCTTTTTTACATCCGAGCATAAGATTAAGCAGCTGTCTGCTGGATCTAAT  450
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AAAGAAACACTTTTCATGTAATTAGCTTTTTTACATCCGAGCATAAGATTAAGCAGCTGTCTGCTGGATCTAAT  592

Query  451  ACTTCAGCTGCCCTAACTGAGGATGGAAGACTTTTTATGTGGGGTGACAATTCCGAAGGGCAAATTGGTTTAAA  524
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  ACTTCAGCTGCCCTAACTGAGGATGGAAGACTTTTTATGTGGGGTGACAATTCCGAAGGGCAAATTGGTTTAAA  666

Query  525  AAATGTAAGTAATGTCTGTGTCCCTCAGCAAGTGACCATTGGGAAACCTGTCTCCTGGATCTCTTGTGGATATT  598
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AAATGTAAGTAATGTCTGTGTCCCTCAGCAAGTGACCATTGGGAAACCTGTCTCCTGGATCTCTTGTGGATATT  740

Query  599  ACCATTCAGCTTTTGTAACAACAGATGGTGAGCTATATGTGTTTGGAGAACCTGAGAATGGGAAGTTAGGTCTT  672
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  ACCATTCAGCTTTTGTAACAACAGATGGTGAGCTATATGTGTTTGGAGAACCTGAGAATGGGAAGTTAGGTCTT  814

Query  673  CCCAATCAGCTCCTGGGCAATCACAGAACACCCCAGCTGGTGTCTGAAATTCCGGAGAAGGTGATCCAAGTAGC  746
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CCCAATCAGCTCCTGGGCAATCACAGAACACCCCAGCTGGTGTCTGAAATTCCGGAGAAGGTGATCCAAGTAGC  888

Query  747  CTGTGGTGGAGAGCATACTGTGGTTCTCACGGAGAATGCTGTGTATACCTTTGGGCTGGGACAATTTGGTCAGC  820
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CTGTGGTGGAGAGCATACTGTGGTTCTCACGGAGAATGCTGTGTATACCTTTGGGCTGGGACAATTTGGTCAGC  962

Query  821  TGGGTCTTGGCACTTTTCTTTTTGAAACTTCAGAACCCAAAGTCATTGAGAATATTAGGGATCAAACAATAAGT  894
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TGGGTCTTGGCACTTTTCTTTTTGAAACTTCAGAACCCAAAGTCATTGAGAATATTAGGGATCAAACAATAAGT  1036

Query  895  TATATTTCTTGTGGAGAAAATCACACAGCTTTGATAACAGATATCGGCCTTATGTATACTTTTGGAGATGGTCG  968
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  TATATTTCTTGTGGAGAAAATCACACAGCTTTGATAACAGATATCGGCCTTATGTATACTTTTGGAGATGGTCG  1110

Query  969  CCACGGAAAATTAGGACTTGGACTGGAGAATTTTACCAATCACTTCATTCCTACTTTGTGCTCTAATTTTTTGA  1042
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  CCACGGAAAATTAGGACTTGGACTGGAGAATTTTACCAATCACTTCATTCCTACTTTGTGCTCTAATTTTTTGA  1184

Query 1043  GGTTTATAGTTAAATTGGTTGCTTGTGGTGGATGTCACATGGTAGTTTTTGCTGCTCCTCATCGTGGTGTGGCA  1116
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  GGTTTATAGTTAAATTGGTTGCTTGTGGTGGATGTCACATGGTAGTTTTTGCTGCTCCTCATCGTGGTGTGGCA  1258

Query 1117  AAAGAAATTGAATTCGATGAAATAAATGATACTTGCTTATCTGTGGCGACTTTTCTGCCGTATAGCAGTTTAAC  1190
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  AAAGAAATTGAATTCGATGAAATAAATGATACTTGCTTATCTGTGGCGACTTTTCTGCCGTATAGCAGTTTAAC  1332

Query 1191  CTCAGGAAATGTACTGCAGAGGACTCTATCAGCACGTATGCGGCGAAGAGAGAGGGAGAGGTCTCCAGATTCTT  1264
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  CTCAGGAAATGTACTGCAGAGGACTCTATCAGCACGTATGCGGCGAAGAGAGAGGGAGAGGTCTCCAGATTCTT  1406

Query 1265  TTTCAATGAGGAGAACACTACCTCCAATAGAAGGGACTCTTGGCCTTTCTGCTTGTTTTCTCCCCAATTCAGTC  1338
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  TTTCAATGAGGAGAACACTACCTCCAATAGAAGGGACTCTTGGCCTTTCTGCTTGTTTTCTCCCCAATTCAGTC  1480

Query 1339  TTTCCACGATGTTCTGAGAGAAACCTCCAAGAGAGTGTCTTATCTGAACAGGACCTCATGCAGCCAGAGGAACC  1412
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  TTTCCACGATGTTCTGAGAGAAACCTCCAAGAGAGTGTCTTATCTGAACAGGACCTCATGCAGCCAGAGGAACC  1554

Query 1413  A-------------------------------------------------------------------------  1413
            |                                                                         
Sbjct 1555  AGATTATTTGCTAGATGAAATGACCAAAGAAGCAGAGATAGATAATTCTTCAACTGTAGAAAGCCTTGGAGAAA  1628

Query 1414  -------------------GACACACATCATGAGCCTGAATTCCAA----------------------------  1440
                               |||||||||||||||||||||||||||                            
Sbjct 1629  CTACTGATATCTTAAACATGACACACATCATGAGCCTGAATTCCAATGAAAAGTCATTAAAATTATCACCAGTT  1702

Query 1441  --------------------------------------------------------------------------  1440
                                                                                      
Sbjct 1703  CAGAAACAAAAGGATCATGAATTTTCTAAAACTGAGGAACTAAAACTAGAAGATGTGGATGAGGAAATTAATGC  1776

Query 1441  --------------------------------------------------------------------------  1440
                                                                                      
Sbjct 1777  TGAAAATGTGGAAAGCAAGAAGAAAACTGTGGGAGATGATGAAAGTGTTCCTACAGGTTATCACAGTAAAACAG  1850

Query 1441  --------------------------------------------------------------------------  1440
                                                                                      
Sbjct 1851  AAGGAGCAGAAAGAACCAATGATGATAGCTCAGCTGAAACTATTGAAAAGAAAGAAAAAGCCAACCTAGAGGAA  1924

Query 1441  --------------------------------------------------------------------------  1440
                                                                                      
Sbjct 1925  CGGGCCATTTGTGAGTACAATGAAAACCCAAAAGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAAT  1998

Query 1441  --------------------------------------------------------------------------  1440
                                                                                      
Sbjct 1999  CCTAGAAAACAGTGAAACAACACCAAGCAAAGACATGAAAAAAACAAAGAAGATGGAGTTTCGCTCTTGTTGCC  2072

Query 1441  --------------------------------------------------------------------------  1440
                                                                                      
Sbjct 2073  CAGGCTGGAGTGCAATGGCGCGATCTTGGCTCACCACAATCCTGCCTCCCAGGTTCAAGCGATTCTCCTGCCTC  2146

Query 1441  --------------------------------------------------------------------------  1440
                                                                                      
Sbjct 2147  AGCCTCCCAAGTAGCTGAGATTACAGGCATGTGCCACCATGCCTGGCTGATTTTGTACTTTTAGTAGAGACGGG  2220

Query 1441  --------------------------------------------------------------------------  1440
                                                                                      
Sbjct 2221  GTTTCTCCATGTTGGTCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCGCCTGTCTTGGCCTCCCAAAGTG  2294

Query 1441  --------------------------------------------------------------------------  1440
                                                                                      
Sbjct 2295  CTGGGATTACAGGCGTGAGCCACCATGCCCAGCAGATTTTTCTGTTCAAAAGAGTCCCCTCAATAAATCAAAAG  2368

Query 1441  --------------------------------------------------------------------------  1440
                                                                                      
Sbjct 2369  ATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAGATCATTTTAAAAAGTGATAA  2442

Query 1441  --------------------------------------------------------------------------  1440
                                                                                      
Sbjct 2443  TAAAGATGCCGACCAGAACCACATGAGTCAGAATCATCAGAATATCCCACCAACAAATACAGAGAGAAGATCAA  2516

Query 1441  --------------------------------------------------------------------------  1440
                                                                                      
Sbjct 2517  AATCCTGTACAATACTATAAATATATATTTATGTTTTCACAGTCACCAAGTGTATTGTAATGTATACTTGAAAA  2590

Query 1441  --------------------------------------------------------------------------  1440
                                                                                      
Sbjct 2591  ATGTTATAACTTATGAAGTAAAGTTTCTGATAGTAGTCTTTAAAAGATATAAGACTTAATATGTTTTATTCAGC  2664

Query 1441  --------------------------------------------------------------------------  1440
                                                                                      
Sbjct 2665  TTCTATAAGTGTGACCAGTTTTGATATTTATTTATGCTAATATTTTTAACAAGTCATTTCAAAATATGTGTATC  2738

Query 1441  --------------------------------------------------------------------------  1440
                                                                                      
Sbjct 2739  TCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATTGCAATAAAAAATATATTTTTATATGTGGAAA  2812

Query 1441  --------------------------------------------------------------------------  1440
                                                                                      
Sbjct 2813  ATTGAAATAAGATATTTCCTAGTTTTTACTAAACAATTTTACTTCTTTATAATTTTATAAGGCAATATTTGCAA  2886

Query 1441  --------------------------------------------------------------------------  1440
                                                                                      
Sbjct 2887  TCTTACGACACTGTAACAGTTTTTGATGTATTTACAATTTTTACAAAACTGAGGTAAAATTGTTTATAATGAAC  2960

Query 1441  ---------------------------------------  1440
                                                   
Sbjct 2961  ATATTTTAATAAACTATATCTGGTCAGTTCCACTGTTAA  2999

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