Nucleotide Global Alignment
Description
- Query:
- TRCN0000480493
- Subject:
- NR_159805.1
- Aligned Length:
- 2999
- Identities:
- 1440
- Gaps:
- 1559
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTAGTTGATCTCCGGAGTTTCGCCATGCGGAACTTGGGGGCTTTCGCGGCCCGCGTCGGTGCGGAGTAGCTGCT 74
Query 1 --------------------------------------------------------------------ATGAGG 6
||||||
Sbjct 75 TTAGCCCCGACCAAACCGTCCTCTACAGCCTCCTGGCCCCGGCGCAGGCTGCCCGTACTGCCCGTGGCATGAGG 148
Query 7 GAGCCGGAAGAGCTGATGCCCGATTCGGGTGCTGTGTTTACATTTGGGAAAAGTAAATTTGCTGAAAATAATCC 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GAGCCGGAAGAGCTGATGCCCGATTCGGGTGCTGTGTTTACATTTGGGAAAAGTAAATTTGCTGAAAATAATCC 222
Query 81 CGGTAAATTCTGGTTTAAAAATGATGTCCCTGTACATCTTTCATGTGGAGATGAACATTCTGCTGTTGTTACCG 154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CGGTAAATTCTGGTTTAAAAATGATGTCCCTGTACATCTTTCATGTGGAGATGAACATTCTGCTGTTGTTACCG 296
Query 155 GAAATAATAAACTTTACATGTTTGGCAGTAACAACTGGGGTCAGTTAGGATTAGGATCAAAGTCAGCCATCAGC 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GAAATAATAAACTTTACATGTTTGGCAGTAACAACTGGGGTCAGTTAGGATTAGGATCAAAGTCAGCCATCAGC 370
Query 229 AAGCCAACATGTGTCAAAGCTCTAAAACCTGAAAAAGTGAAATTAGCTGCCTGTGGAAGGAACCACACCCTGGT 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AAGCCAACATGTGTCAAAGCTCTAAAACCTGAAAAAGTGAAATTAGCTGCCTGTGGAAGGAACCACACCCTGGT 444
Query 303 GTCAACAGAAGGAGGCAATGTATATGCAACTGGTGGAAATAATGAAGGACAGTTGGGGCTTGGTGACACCGAAG 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GTCAACAGAAGGAGGCAATGTATATGCAACTGGTGGAAATAATGAAGGACAGTTGGGGCTTGGTGACACCGAAG 518
Query 377 AAAGAAACACTTTTCATGTAATTAGCTTTTTTACATCCGAGCATAAGATTAAGCAGCTGTCTGCTGGATCTAAT 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AAAGAAACACTTTTCATGTAATTAGCTTTTTTACATCCGAGCATAAGATTAAGCAGCTGTCTGCTGGATCTAAT 592
Query 451 ACTTCAGCTGCCCTAACTGAGGATGGAAGACTTTTTATGTGGGGTGACAATTCCGAAGGGCAAATTGGTTTAAA 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ACTTCAGCTGCCCTAACTGAGGATGGAAGACTTTTTATGTGGGGTGACAATTCCGAAGGGCAAATTGGTTTAAA 666
Query 525 AAATGTAAGTAATGTCTGTGTCCCTCAGCAAGTGACCATTGGGAAACCTGTCTCCTGGATCTCTTGTGGATATT 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AAATGTAAGTAATGTCTGTGTCCCTCAGCAAGTGACCATTGGGAAACCTGTCTCCTGGATCTCTTGTGGATATT 740
Query 599 ACCATTCAGCTTTTGTAACAACAGATGGTGAGCTATATGTGTTTGGAGAACCTGAGAATGGGAAGTTAGGTCTT 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ACCATTCAGCTTTTGTAACAACAGATGGTGAGCTATATGTGTTTGGAGAACCTGAGAATGGGAAGTTAGGTCTT 814
Query 673 CCCAATCAGCTCCTGGGCAATCACAGAACACCCCAGCTGGTGTCTGAAATTCCGGAGAAGGTGATCCAAGTAGC 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CCCAATCAGCTCCTGGGCAATCACAGAACACCCCAGCTGGTGTCTGAAATTCCGGAGAAGGTGATCCAAGTAGC 888
Query 747 CTGTGGTGGAGAGCATACTGTGGTTCTCACGGAGAATGCTGTGTATACCTTTGGGCTGGGACAATTTGGTCAGC 820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CTGTGGTGGAGAGCATACTGTGGTTCTCACGGAGAATGCTGTGTATACCTTTGGGCTGGGACAATTTGGTCAGC 962
Query 821 TGGGTCTTGGCACTTTTCTTTTTGAAACTTCAGAACCCAAAGTCATTGAGAATATTAGGGATCAAACAATAAGT 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TGGGTCTTGGCACTTTTCTTTTTGAAACTTCAGAACCCAAAGTCATTGAGAATATTAGGGATCAAACAATAAGT 1036
Query 895 TATATTTCTTGTGGAGAAAATCACACAGCTTTGATAACAGATATCGGCCTTATGTATACTTTTGGAGATGGTCG 968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TATATTTCTTGTGGAGAAAATCACACAGCTTTGATAACAGATATCGGCCTTATGTATACTTTTGGAGATGGTCG 1110
Query 969 CCACGGAAAATTAGGACTTGGACTGGAGAATTTTACCAATCACTTCATTCCTACTTTGTGCTCTAATTTTTTGA 1042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CCACGGAAAATTAGGACTTGGACTGGAGAATTTTACCAATCACTTCATTCCTACTTTGTGCTCTAATTTTTTGA 1184
Query 1043 GGTTTATAGTTAAATTGGTTGCTTGTGGTGGATGTCACATGGTAGTTTTTGCTGCTCCTCATCGTGGTGTGGCA 1116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GGTTTATAGTTAAATTGGTTGCTTGTGGTGGATGTCACATGGTAGTTTTTGCTGCTCCTCATCGTGGTGTGGCA 1258
Query 1117 AAAGAAATTGAATTCGATGAAATAAATGATACTTGCTTATCTGTGGCGACTTTTCTGCCGTATAGCAGTTTAAC 1190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AAAGAAATTGAATTCGATGAAATAAATGATACTTGCTTATCTGTGGCGACTTTTCTGCCGTATAGCAGTTTAAC 1332
Query 1191 CTCAGGAAATGTACTGCAGAGGACTCTATCAGCACGTATGCGGCGAAGAGAGAGGGAGAGGTCTCCAGATTCTT 1264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CTCAGGAAATGTACTGCAGAGGACTCTATCAGCACGTATGCGGCGAAGAGAGAGGGAGAGGTCTCCAGATTCTT 1406
Query 1265 TTTCAATGAGGAGAACACTACCTCCAATAGAAGGGACTCTTGGCCTTTCTGCTTGTTTTCTCCCCAATTCAGTC 1338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TTTCAATGAGGAGAACACTACCTCCAATAGAAGGGACTCTTGGCCTTTCTGCTTGTTTTCTCCCCAATTCAGTC 1480
Query 1339 TTTCCACGATGTTCTGAGAGAAACCTCCAAGAGAGTGTCTTATCTGAACAGGACCTCATGCAGCCAGAGGAACC 1412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 TTTCCACGATGTTCTGAGAGAAACCTCCAAGAGAGTGTCTTATCTGAACAGGACCTCATGCAGCCAGAGGAACC 1554
Query 1413 A------------------------------------------------------------------------- 1413
|
Sbjct 1555 AGATTATTTGCTAGATGAAATGACCAAAGAAGCAGAGATAGATAATTCTTCAACTGTAGAAAGCCTTGGAGAAA 1628
Query 1414 -------------------GACACACATCATGAGCCTGAATTCCAA---------------------------- 1440
|||||||||||||||||||||||||||
Sbjct 1629 CTACTGATATCTTAAACATGACACACATCATGAGCCTGAATTCCAATGAAAAGTCATTAAAATTATCACCAGTT 1702
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 1703 CAGAAACAAAAGGATCATGAATTTTCTAAAACTGAGGAACTAAAACTAGAAGATGTGGATGAGGAAATTAATGC 1776
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 1777 TGAAAATGTGGAAAGCAAGAAGAAAACTGTGGGAGATGATGAAAGTGTTCCTACAGGTTATCACAGTAAAACAG 1850
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 1851 AAGGAGCAGAAAGAACCAATGATGATAGCTCAGCTGAAACTATTGAAAAGAAAGAAAAAGCCAACCTAGAGGAA 1924
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 1925 CGGGCCATTTGTGAGTACAATGAAAACCCAAAAGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAAT 1998
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 1999 CCTAGAAAACAGTGAAACAACACCAAGCAAAGACATGAAAAAAACAAAGAAGATGGAGTTTCGCTCTTGTTGCC 2072
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 2073 CAGGCTGGAGTGCAATGGCGCGATCTTGGCTCACCACAATCCTGCCTCCCAGGTTCAAGCGATTCTCCTGCCTC 2146
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 2147 AGCCTCCCAAGTAGCTGAGATTACAGGCATGTGCCACCATGCCTGGCTGATTTTGTACTTTTAGTAGAGACGGG 2220
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 2221 GTTTCTCCATGTTGGTCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCGCCTGTCTTGGCCTCCCAAAGTG 2294
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 2295 CTGGGATTACAGGCGTGAGCCACCATGCCCAGCAGATTTTTCTGTTCAAAAGAGTCCCCTCAATAAATCAAAAG 2368
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 2369 ATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAGATCATTTTAAAAAGTGATAA 2442
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 2443 TAAAGATGCCGACCAGAACCACATGAGTCAGAATCATCAGAATATCCCACCAACAAATACAGAGAGAAGATCAA 2516
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 2517 AATCCTGTACAATACTATAAATATATATTTATGTTTTCACAGTCACCAAGTGTATTGTAATGTATACTTGAAAA 2590
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 2591 ATGTTATAACTTATGAAGTAAAGTTTCTGATAGTAGTCTTTAAAAGATATAAGACTTAATATGTTTTATTCAGC 2664
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 2665 TTCTATAAGTGTGACCAGTTTTGATATTTATTTATGCTAATATTTTTAACAAGTCATTTCAAAATATGTGTATC 2738
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 2739 TCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATTGCAATAAAAAATATATTTTTATATGTGGAAA 2812
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 2813 ATTGAAATAAGATATTTCCTAGTTTTTACTAAACAATTTTACTTCTTTATAATTTTATAAGGCAATATTTGCAA 2886
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 2887 TCTTACGACACTGTAACAGTTTTTGATGTATTTACAATTTTTACAAAACTGAGGTAAAATTGTTTATAATGAAC 2960
Query 1441 --------------------------------------- 1440
Sbjct 2961 ATATTTTAATAAACTATATCTGGTCAGTTCCACTGTTAA 2999
