Nucleotide Global Alignment

Description

• Query: TRCN0000480516
• Subject: XM_017010655.2
• Aligned Length: 1468
• Identities: 866
• Gaps: 559

Alignment

Query    1  ATGGGCTGTGTGCAATGTAAGGATAAAGAAGCAACAAAACTGACGGAGGAGAGGGACGGCAGCCTGAACCAGAG  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGGCTGTGTGCAATGTAAGGATAAAGAAGCAACAAAACTGACGGAGGAGAGGGACGGCAGCCTGAACCAGAG  74

Query   75  CTCTGGGTACCGCTATGGCACAGACCCCACCCCTCAGCACTACCCCAGCTTCGGTGTGACCTCCATCCCCAACT  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CTCTGGGTACCGCTATGGCACAGACCCCACCCCTCAGCACTACCCCAGCTTCGGTGTGACCTCCATCCCCAACT  148

Query  149  ACAACAACTTCCACGCAGCCGGGGGCCAAGGACTCACCGTCTTTGGAGGTGTGAACTCTTCGTCTCATACGGGG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  ACAACAACTTCCACGCAGCCGGGGGCCAAGGACTCACCGTCTTTGGAGGTGTGAACTCTTCGTCTCATACGGGG  222

Query  223  ACCTTGCGTACGAGAGGAGGAACAGGAGTGACACTCTTTGTGGCCCTTTATGACTATGAAGCACGGACAGAAGA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  ACCTTGCGTACGAGAGGAGGAACAGGAGTGACACTCTTTGTGGCCCTTTATGACTATGAAGCACGGACAGAAGA  296

Query  297  TGACCTGAGTTTTCACAAAGGAGAAAAATTTCAAATATTGAACAGCTCGGAAGGAGATTGGTGGGAAGCCCGCT  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TGACCTGAGTTTTCACAAAGGAGAAAAATTTCAAATATTGAACAGCTCGGAAGGAGATTGGTGGGAAGCCCGCT  370

Query  371  CCTTGACAACTGGAGAGACAGGTTACATTCCCAGCAATTATGTGGCTCCAGTTGACTCTATCCAGGCAGAAGAG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CCTTGACAACTGGAGAGACAGGTTACATTCCCAGCAATTATGTGGCTCCAGTTGACTCTATCCAGGCAGAAGAG  444

Query  445  TGGTACTTTGGAAAACTTGGCCGAAAAGATGCTGAGCGACAGCTATTGTCCTTTGGAAACCCAAGAGGTACCTT  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TGGTACTTTGGAAAACTTGGCCGAAAAGATGCTGAGCGACAGCTATTGTCCTTTGGAAACCCAAGAGGTACCTT  518

Query  519  TCTTATCCGCGAGAGTGAAACCACCAAAGGTGCCTATTCACTTTCTATCCGTGATTGGGATGATATGAAAGGAG  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TCTTATCCGCGAGAGTGAAACCACCAAAGGTGCCTATTCACTTTCTATCCGTGATTGGGATGATATGAAAGGAG  592

Query  593  ACCATGTCAAACATTATAAAATTCGCAAACTTGACAATGGTGGATACTACATTACCACCCGGGCCCAGTTTGAA  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  ACCATGTCAAACATTATAAAATTCGCAAACTTGACAATGGTGGATACTACATTACCACCCGGGCCCAGTTTGAA  666

Query  667  ACACTTCAGCAGCTTGTACAACATTACTCAGGTACCTGGAATGGAAACACAAAAGTAGC--CATAAAGACTCTT  738
            |||||||||||||||||||||||||||||||                    |.|| |||  |   |.|.|||| 
Sbjct  667  ACACTTCAGCAGCTTGTACAACATTACTCAG--------------------AGAG-AGCTGC---AGGTCTCT-  715

Query  739  AAACCAGGCACAATGTCCCCCGAATCATTCCTTGAGGAAGCGCAGATCATGAAGAAGCTGAAGCACGACAA-GC  811
                   ||    || ||.||.|.|..||||.||            |||..|||        |.|.|.||| ||
Sbjct  716  -------GC----TG-CCGCCTAGTAGTTCCCTG------------TCACAAAG--------GGATGCCAAGGC  757

Query  812  TGGTCCAGCTCTATGCAGTGGTGTCTGAGGAGCCCATCTACATCGTCACCGAGTATATGAACAAAGGAAGTTTA  885
            |  |.|.|.||          |||||                  ||||          .|||.||.||.||   
Sbjct  758  T--TACCGATC----------TGTCT------------------GTCA----------AAACCAAAGATGT---  788

Query  886  CTGGATTTCTTAAAAGA------TGGAGAAGGAAGAGCTCTGAAATT-ACCAA-ATCTTGTGGACATGGCAGCA  951
            ||||           ||      |.||||      |.|.|||.|.|| |.||| |...|| |||.||||  |||
Sbjct  789  CTGG-----------GAAATCCCTCGAGA------ATCCCTGCAGTTGATCAAGAGACTG-GGAAATGG--GCA  842

Query  952  CAGG--TGGCTGCAGGAATGGCTTACATCGAGCGCATGAATTATATCCATAGAGATCTGCGATCAGCAAACATT  1023
               |  |||     ||||               |.|||.||                                 
Sbjct  843  ---GTTTGG-----GGAA---------------GTATGGAT---------------------------------  860

Query 1024  CTAGTGGGGAATG----GACTCATATGCAAGATTGCTGACTTCGGATTGG----CCCGATTGATAGAAGA---C  1086
                  |||.|||    ||||||        |||.||..|||   |||.|    ||||.|||   |||||   |
Sbjct  861  ------GGGTATGCTGAGACTCA--------ATTACTCTCTT---ATTAGCTTCCCCGTTTG---GAAGATCCC  914

Query 1087  AATGAGTACACAGCAAGACAAGGTGCAAAGTTCCCCATCAAGTGGACGGCCCCCGAGGCAGCCCTGTACGGGAG  1160
            ||       |||.||    |||.||.||.|                                            
Sbjct  915  AA-------ACACCA----AAGATGGAAGG--------------------------------------------  933

Query 1161  GTTCACAATCAAGTCTGACGTGTGGTCTTTTGGAATCTTACTCACAGAGCTGGTCACCAAAGGAAGAGTGCCAT  1234
                                                                                      
Sbjct  934  --------------------------------------------------------------------------  933

Query 1235  ACCCAGGCATGAACAACCGGGAGGTGCTGGAGCAGGTGGAGCGAGGCTACAGGATGCCCTGCCCGCAGGACTGC  1308
                                                                                      
Sbjct  934  --------------------------------------------------------------------------  933

Query 1309  CCCATCTCTCTGCATGAGCTCATGATCCACTGCTGGAAAAAGGACCCTGAAGAACGCCCCACTTTTGAGTACTT  1382
                                                                                      
Sbjct  934  --------------------------------------------------------------------------  933

Query 1383  GCAGAGCTTCCTGGAAGACTACTTTACCGCGACAGAGCCCCAGTACCAACCTGGTGAAAACC  1444
                                                                          
Sbjct  934  --------------------------------------------------------------  933