Nucleotide Global Alignment
Description
- Query:
- TRCN0000480630
- Subject:
- XR_001749587.2
- Aligned Length:
- 3158
- Identities:
- 1241
- Gaps:
- 1916
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAGCGGGGGCGGTGCTGGGCAGGGCGGCGGCCGCTCCCTCCCGGACTCCCGGCCTCCCGGCCTCCCTGGTCCCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCTGGGAAGGGATGCAAGGAAGCCCTCCGGCGCTGCGCTCCGAGGCGGGAGACAGCGTCCCCCTCCGCCCCTCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGTCCTGGCGCCTCAGAGCCCGGCCCAGGCCGCGGAACGGTGATGCTCGGGCCGGACGGGCGGGCGCGGATCCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGCGTCCCGCTGAAAATGTGTGTCTGACATGCAAGCTCAGTGGGGCAGAGACCCGTGGATTGCTGTGCCCTGCC 296
Query 1 ---------------ATGAAGGTGTTGGGAAGAAGCTTCTTCTGGGTGCTGTTTCCCGTCCTTCCCTGGGCGGT 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CTCCGGACCTGGATCATGAAGGTGTTGGGAAGAAGCTTCTTCTGGGTGCTGTTTCCCGTCCTTCCCTGGGCGGT 370
Query 60 GCAGGCTGTGGAGCACGAGGAGGTGGCGCAGCGTGTGATCAAACTGCACCGCGGGCGAGGGGTGGCTGCCATGC 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GCAGGCTGTGGAGCACGAGGAGGTGGCGCAGCGTGTGATCAAACTGCACCGCGGGCGAGGGGTGGCTGCCATGC 444
Query 134 AGAGCCGGCAGTGGGTCCGGGACAGCTGCAGGAAGCTCTCAGGGCTTCTCCGCCAGAAGAATGCAGTTCTGAAC 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AGAGCCGGCAGTGGGTCCGGGACAGCTGCAGGAAGCTCTCAGGGCTTCTCCGCCAGAAGAATGCAGTTCTGAAC 518
Query 208 AAACTGAAAACTGCAATTGGAGCAGTGGAGAAAGACGTGGGCCTGTCGGATGAAGAGAAACTGTTTCAGGTGCA 281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AAACTGAAAACTGCAATTGGAGCAGTGGAGAAAGACGTGGGCCTGTCGGATGAAGAGAAACTGTTTCAGGTGCA 592
Query 282 CACGTTTGAAATTTTCCAGAAAGAGCTGAATGAAAGTGAAAATTCCGTTTTCCAAGCTGTCTACGGACTGCAGA 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CACGTTTGAAATTTTCCAGAAAGAGCTGAATGAAAGTGAAAATTCCGTTTTCCAAGCTGTCTACGGACTGCAGA 666
Query 356 GAGCCCTGCAGGGGGATTACAAAGATGTCGTGAACATGAAGGAGAGCAGCCGGCAGCGCCTGGAGGCCCTGAGA 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GAGCCCTGCAGGGGGATTACAAAGATGTCGTGAACATGAAGGAGAGCAGCCGGCAGCGCCTGGAGGCCCTGAGA 740
Query 430 GAGGCTGCAATAAAGGAAGAAACAGAATATATGGAACTTCTGGCAGCAGAAAAACATCAAGTTGAAGCCCTTAA 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GAGGCTGCAATAAAGGAAGAAACAGAATATATGGAACTTCTGGCAGCAGAAAAACATCAAGTTGAAGCCCTTAA 814
Query 504 AAATATGCAACATCAAAACCAAAGTTTATCCATGCTTGACGAGATTCTTGAAGATGTAAGAAAGGCAGCGGATC 577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AAATATGCAACATCAAAACCAAAGTTTATCCATGCTTGACGAGATTCTTGAAGATGTAAGAAAGGCAGCGGATC 888
Query 578 GTCTGGAGGAAGAGATAGAGGAACATGCTTTTGACGACAATAAATCAGTCAAGGGGGTCAATTTTGAGGCAGTT 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GTCTGGAGGAAGAGATAGAGGAACATGCTTTTGACGACAATAAATCAGTCAAGGGGGTCAATTTTGAGGCAGTT 962
Query 652 CTGAGGGTGGAGGAAGAAGAGGCCAATTCTAAGCAAAATATAACAAAACGAGAAGTGGAGGATGACTTGGGTCT 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CTGAGGGTGGAGGAAGAAGAGGCCAATTCTAAGCAAAATATAACAAAACGAGAAGTGGAGGATGACTTGGGTCT 1036
Query 726 TAGCATGCTGATTGACTCCCAGAACAACCAGTATATTTTGACCAAGCCCAGAGATTCAACCATCCCACGTGCAG 799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TAGCATGCTGATTGACTCCCAGAACAACCAGTATATTTTGACCAAGCCCAGAGATTCAACCATCCCACGTGCAG 1110
Query 800 ATCACCACTTTATAAAGGACATTGTTACCATAGGAATGCTGTCCTTGCCTTGTGGCTGGCTATGTACAGCCATA 873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ATCACCACTTTATAAAGGACATTGTTACCATAGGAATGCTGTCCTTGCCTTGTGGCTGGCTATGTACAGCCATA 1184
Query 874 GGATTGCCTACAATGTTTGGTTATATTATTTGTGGTGTACTTCTGGGACCTTCAGGACTAAATAGTATTAAGTC 947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GGATTGCCTACAATGTTTGGTTATATTATTTGTGGTGTACTTCTGGGACCTTCAGGACTAAATAGTATTAAGTC 1258
Query 948 TATTGTGCAAGTGGAGACATTAGGAGAATTTGGGGTGTTTTTTACTCTTTTTCTTGTTGGCTTAGAATTTTCTC 1021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TATTGTGCAAGTGGAGACATTAGGAGAATTTGGGGTGTTTTTTACTCTTTTTCTTGTTGGCTTAGAATTTTCTC 1332
Query 1022 CAGAAAAGCTAAGAAAGGTGTGGAAGATTTCCTTACAAGGGCCGTGTTACATGACACTGTTAATGATTGCATTT 1095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CAGAAAAGCTAAGAAAGGTGTGGAAGATTTCCTTACAAGGGCCGTGTTACATGACACTGTTAATGATTGCATTT 1406
Query 1096 GGCTTGCTGTGGGGGCATCTCTTGCGGATCAAACCCACGCAGAGCGTCTTCATTTCCACGTGTCTGTCCTTGTC 1169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GGCTTGCTGTGGGGGCATCTCTTGCGGATCAAACCCACGCAGAGCGTCTTCATTTCCACGTGTCTGTCCTTGTC 1480
Query 1170 AAGCACACCCCTCGTGTCCAGGTTCCTCATGGGCAGTGCTCGGGGTGACAAAGAAGGCAACA--GA--ACAGC- 1238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||| || |||||
Sbjct 1481 AAGCACACCCCTCGTGTCCAGGTTCCTCATGGGCAGTGCTCGGGGTGACAAAGAAGGCGACATTGACTACAGCA 1554
Query 1239 -------CCTC--------------------------------------------------------------- 1242
||||
Sbjct 1555 CCGTGCTCCTCGGCATGCTGGTGACGCAGGACGTGCAGCTCGGGCTCTTCATGGCCGTCATGCCGACTCTCATA 1628
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 1629 CAGGCGGGCGCCAGTGCATCTTCTAGCATTGTCGTGGAAGTTCTCCGAATCCTGGTTTTGATTGGTCAGATTCT 1702
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 1703 TTTTTCACTAGCGGCGGTTTTTCTTTTATGTCTTGTTATAAAGAAGTATCTCATTGGACCCTATTATCGGAAGC 1776
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 1777 TGCACATGGAAAGCAAGGGGAACAAAGAAATCCTGATCTTGGGAATATCTGCCTTTATCTTCTTAATGTTAACG 1850
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 1851 GTTGGCCGGTGTCAGCCGTGCGTCATCCGGAAGGCTGCCATAAGCCTGCGTTTCGCAGAGCTGCGCTGAGGCTC 1924
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 1925 CCGTGTCGCGGCCGTCCGGCCGGCGCGCTGATGTGGCTGCAAACCTGGGTCACGGAGCTGCTGGACGTCTCCAT 1998
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 1999 GGAGCTGGGCTGTTTCCTGGCTGGAGCGCTCGTCTCCTCTCAGGGCCCCGTGGTCACCGAGGAGATCGCCACCT 2072
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 2073 CCATCGAACCCATCCGCGACTTCCTGGCCATCGTTTTCTTCGCCTCCATAGGGCTCCACGTGTTCCCCACGTTT 2146
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 2147 GTGGCGTACGAGCTCACGGTGCTGGTGTTCCTCACCTTGTCAGTGGTGGTGATGAAGTTTCTCCTGGCGGCGCT 2220
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 2221 GGTCCTGTCTCTCATTCTGCCGAGGAGCAGCCAGTACATCAAGTGGATCGTCTCTGCGGGGCTTGCCCAGGTCA 2294
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 2295 GCGAGTTTTCCTTTGTCCTGGGGAGCCGGGCGCGAAGAGCGGGCGTCATCTCTCGGGAGGTGTACCTCCTTATA 2368
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 2369 CTGAGTGTGACCACGCTCAGCCTCTTGCTCGCCCCGGTGCTGTGGAGAGCTGCAATCACGAGGTGTGTGCCCAG 2442
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 2443 ACCGGAGAGACGGTCCAGCCTCTGATGGCTCGGAGATGATGGACCGTGGAAGGGAAGCGTCTGTGGGGAGTGAG 2516
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 2517 CGCTTAGATGGCCAGCAGCTGCTCCTTCTGGGAAGCTCGCACCTTGGCAACAGAACAGCCCTCTAGCAGAGCGT 2590
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 2591 CAGTGCAGTCGTGTTATCCCGGCTTTTACAGAATATTCTTGTCCTATTTTAGAATTTTCCGGAGTAGTTTATTT 2664
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 2665 GCAGTCTGTTGATTATGTGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGTGGTGCCTGGATG 2738
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 2739 TGCCTTTTTTTTTTTTCCCTGAAATTATTATTAATTTTCTATTGTGAGTTCATCAGTTCATAGTTTTTTTAGTA 2812
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 2813 AAGAAGCAAAATTAAAAGGCTTTTAAAAATGTACAACTTCAGAATTATAATCTGTTAGTCAAATATTTGTTATT 2886
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 2887 AAACATTTCTGTAATATGAAGTTGTAATCCTGGCCGTGAGCTTGGAAGCTTACTTTTGATTCTTAAAGCCTATG 2960
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 2961 TTTTCTAAAATGAGACAAATACGGATGTCTATTTGCCTTTTATTGTAACTTTTAAATGAAATAATTTCATGTCA 3034
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 3035 ATTTCTATTAGATATATCACTTAAAATATTTGGTTTTAAATCACAAGAATATGTATTCTTTAATAAAGATAATT 3108
Query 1243 -------------------------------------------------- 1242
Sbjct 3109 TATGATCATGGTATAATTAATTGAAATTTATTAAAATCTGTTTTTATTAA 3158
