Nucleotide Global Alignment
Description
- Query:
- TRCN0000480685
- Subject:
- XR_878325.2
- Aligned Length:
- 4198
- Identities:
- 1494
- Gaps:
- 2560
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGGGGCCAGGGTATCCGCGGAGGAAGGGGGCGGGTCCTTGAGGCCACGGTACTGGGCGGTGGAGGCTGCAGCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACCTTTGCAGGCTTGCCTCTAGGACGCCTCGCGCTGCCGAGGTCGGGGGCGGCGCCCTGCTACCGCTGGGCCTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGGCGATTCCACGCAGACCACACCGCCCTCCAGAAACCATGGGTGTTGCTAGACCCAGCTGGGATTCTGCCAAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTCTGGTGCTCAGTCTAAGACAAGGGCTGCCTTCCAGCCCTGTTCGCCCAGCCTGTCATGGCCACACACCGATG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCTCCCGCTTGTGTGGGGACACAGGGCACCCAGCCCCAACCCTGAAAGGTTAAGCCAGGCCTTCTGGCTCCATT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCACAGGGACACTGCAGGCCCGAGGCTCCTTTCAGAGCAAGAGCAACTGATGTCATGGGAGAAGCCCCTACCCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACTGTCCACTTGCCTGGCACTGCCTGTTCTGAGACCCACGCCCTGGGTCCTTCTGCAGGTGCCAACCCCGTGAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTCCCTCCCACCCCCTGACCCGACGCTGAGAAGGCTCTCTCCATTCCCATCATGTGTGAGGTGATGCCCACAAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAATGAGGGGGACCCCCTGGGGCCCCCCCACGGTGCCGATGCTGAGGCCAACTTTGAGCAGCTGATGGTGAACA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGCTGGATGAGCGAGAGAAGTTGCTGGAGTCCCTTCGGGAGAGTCAGGAAACTTTGGTAGCCACACAGAGCCGG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTCCAGGATGCCCTTCACGAGCGAGATCAGCTCCAGCGCCACCTGAACTCCGCCCTTCCCCAGGAATTTGCCAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTTAACTCGGGAGCTAAGCATGTGTCGGGAGCAGCTTCTGGAGCGGGAGGAAGAGATATCTGAGCTGAAAGCAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGCGGAATAACACAAGGCTGCTTCTGGAACATCTGGAATGCCTCGTGTCCCGCCATGAGCGGTCATTGCGGATG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ACAGTGGTAAAACGGCAGGCCCAATCACCTTCAGGTGTCTCCAGTGAGGTGGAGGTGCTGAAGGCCCTCAAGTC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACTATTTGAGCACCACAAGGCCCTGGATGAGAAGGTGCGAGAGCGGCTCCGGGCAGCTCTAGAGCGCGTTACTA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCTTGGAGGAGCAGTTGGCAGGAGCTCACCAGCAGGTATCTGCCCTGCAGCAGGGTGCAGGAATTCGGGATGGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GTAGCAGAAGAGGAAGGGACTGTGGATCTGGGACCAAAACGCCTGTGGAAAGATGACACTGGCCGCGTGGAAGA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GCTGCAAGGACTCTTGGAGAAGCAAAACTATGAGTTGAGCCAGGCCCGTGAGCGGCTGGTCACCCTGAGTGCCA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CCGTGACTGAGCTGGAGGAGGACCTGGGCACGGCCCGCCGAGACCTCATCAAGTCAGAGGAGCTGAGCAGCAAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CATCAGCGGGACCTCCGAGAGGCTCTGGCTCAGAAGGAGGACATGGAAGAGAGAATCACCACACTGGAGAAGCG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CTACTTGGCTGCTCAGCGAGAAGCCACATCCATCCATGACCTCAATGACAAACTGGAGAATGAGCTGGCCAACA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGGAATCCCTGCACCGCCAGTGTGAGGAGAAAGCCCGGCATCTGCAGGAGCTGCTAGAAGTAGCAGAGCAGAAG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TTGCAGCAGACCATGCGCAAGGCAGAGACTCTGCCCGAGGTGGAGGCTGAGCTGTCTCAGAGAATCGCAGCCCT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CACCAAGGCTGAGGAACGTCATGGCAACATTGAGGAACATCTGCGGCAGCTGGAAGGGCAGCTGGAAGAGAAGA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ACCAGGAGCTGGCAAGGGTGCGCCAGCGGGAGAAGATGAATGAAGACCACAACAAGCGGCTGTCAGACACCGTG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GACCGGTTGCTTAGTGAGTCCAACGAACGCCTGCAGCTCCACCTCAAGGAGCGAATGGCTGCCCTGGAGGAGAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GGGCCGTCTGTCTGAAGAGATTGAGAAGCTGCGCCAAGAGGTGGACCAGCTGAAGGGTCGAGGGGGGCCGTTTG 1998
Query 1 --------------------------ATGGGCAGTGCAGCAGACGTGCGGTTCTCCCTGGGCACAACCACACAC 48
.|||||||.||||||||.|||.|||||||.|||.|.|||.||||||||
Sbjct 1999 TGGATGGCATCCACTCCAGGTCACACGTGGGCAGCGCAGCAGATGTGAGGTTCTCACTGAGTACAGCCACACAC 2072
Query 49 GCACCCCCAGGCGTGCATCGCCGCTACTCGGCATTGAGGGAAGAGTCTGCCAAGGACTGGGAGACTTCTCCACT 122
||.||||||||..|||||||.|||||.|||||..|||||||.||.|||||||||||||||.||.|.||.|||||
Sbjct 2073 GCGCCCCCAGGTCTGCATCGACGCTATTCGGCGCTGAGGGATGAATCTGCCAAGGACTGGAAGCCATCGCCACT 2146
Query 123 GCCTGGGATGCTGG------CCCCGGCAGCTGGCCCTGCCTTTGACAGTGACCCTGAGATCTCCGACGTGGATG 190
|||.|||.||.||| ||.|| |||||||||||||||||||||||||||||.||.|||||||
Sbjct 2147 GCCAGGGGTGTTGGGCGCCACCACG---------CCTGCCTTTGACAGTGACCCTGAGATCTCTGATGTGGATG 2211
Query 191 AGGATGAGCCAGGGGGTCTGGTGGGCTCT---GCGGATGTTGTCTCCCCCAGCGGCCACTCAGATGCCCAGACC 261
||||||||||.|||||..||||||||.|| |..|||||..||||.|||.|.|||||.|||||||||||||||
Sbjct 2212 AGGATGAGCCTGGGGGCTTGGTGGGCACTCAGGTCGATGTCATCTCACCCGGTGGCCATTCAGATGCCCAGACC 2285
Query 262 CTGGCCATGATGCTGCAGGAGCAGCTGGATGCCATCAATGAGGAAATCAGGATGATTCAGGAAGAGAAGGAGTC 335
||||||||||||||.|||||||||||||||||||||||..||||.|||||||||||.|||||.|||||||||||
Sbjct 2286 CTGGCCATGATGCTACAGGAGCAGCTGGATGCCATCAACCAGGAGATCAGGATGATCCAGGAGGAGAAGGAGTC 2359
Query 336 CACGGAGCTCCGCGCGGAGGAGATTGAGACGCGTGTAACCAGTGGCAGCATGGAAGCCCTAAACCTGAAGCAGC 409
|||.|||||.||.||.||||||||||||||.|||||.|||||.|||||||||||.|||||.|||||||..||||
Sbjct 2360 CACTGAGCTTCGAGCTGAGGAGATTGAGACCCGTGTGACCAGCGGCAGCATGGAGGCCCTCAACCTGACCCAGC 2433
Query 410 TGCGCAAGCGTGGTTCCATCCCCACCTCTCTGACGGCCCTGTCCCTGGCCAGCGCGTCCCCACCACTCAGCGGC 483
|||||||||||||.||.|||||||||||||||||.|||||.|||||||||||.||.||.|||||.|||||.|||
Sbjct 2434 TGCGCAAGCGTGGCTCTATCCCCACCTCTCTGACCGCCCTTTCCCTGGCCAGTGCATCTCCACCGCTCAGTGGC 2507
Query 484 CGCTCCACACCTAAGCTCACCTCCCGCAGTGCTGCCCAGGACCTGGACCGAATGGGGGTCATGACCCTGCCCAG 557
|||||||||||.||||||||.|||||.||||||||||||||.||||||||||||||||||||||||||||||||
Sbjct 2508 CGCTCCACACCCAAGCTCACTTCCCGAAGTGCTGCCCAGGATCTGGACCGAATGGGGGTCATGACCCTGCCCAG 2581
Query 558 TGACTTAAGAAAGCATAGGAGGAAGCTGCTGTCGCCAGTGTCTCGGGAAGAGAACCGAGAGGATAAAGCCACCA 631
.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2582 CGACTTAAGAAAGCATAGGAGGAAGCTGCTGTCGCCAGTGTCTCGGGAAGAGAACCGAGAGGATAAAGCCACCA 2655
Query 632 TAAAATGTGAGACTTCTCCTCCTTCCTCACCCAGGACGCTGCGGCTAGAGAAGCTTGGCCACCCAGCCCTGAGC 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|.||||||.
Sbjct 2656 TAAAATGTGAGACTTCTCCTCCTTCCTCACCCAGGACGCTGCGGCTAGAGAAGCTTGGCCACCCTGGCCTGAGT 2729
Query 706 CAGGAAGAAGGCAAGAGTGCCTTGGAGGATCAGGGCAGCAACCCCAGCAGCAGCAACAGCAGCCAGGACTCCCT 779
||.||.||.|||||||||||||||||||.|||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 2730 CAAGAGGAGGGCAAGAGTGCCTTGGAGGGTCAGGACAGCAACCCCAGCAGCAGCAACAGCAGCCAGGACTCCCT 2803
Query 780 GCACAAGGGCGCCAAGCGAAAGGGCATCAAGTCGTCCATTGGCCGCCTGTTTGGGAAGAAGGAGAAGGGCAGGC 853
||||||||||||||||||.||||||||||||||.||||||||||||||||||||||||||||||||||||||||
Sbjct 2804 GCACAAGGGCGCCAAGCGCAAGGGCATCAAGTCATCCATTGGCCGCCTGTTTGGGAAGAAGGAGAAGGGCAGGC 2877
Query 854 TGATCCAGCTGAGTCGGGATGGAGCCACAGGCCATGTTCTGCTAACAGACTCCGAATTCAGTATGCAGGAGCCT 927
|||||||||||||||||||| |||||.||||||||||||||.|||||||||||..|||||.|||||||.||.
Sbjct 2878 TGATCCAGCTGAGTCGGGAT---GCCACGGGCCATGTTCTGCTCACAGACTCCGAGCTCAGTCTGCAGGAACCA 2948
Query 928 ATGGTGCCTGCCAAGCTGGGGACCCAGGCAGAGAAGGACCGGCGGCTAAAGAAGAAACACCAGCTGCTTGAAGA 1001
|||||.|||||.|||.||||||||||||||||||||||||||||.||.||.|||||||||||||||||||||||
Sbjct 2949 ATGGTACCTGCTAAGTTGGGGACCCAGGCAGAGAAGGACCGGCGACTGAAAAAGAAACACCAGCTGCTTGAAGA 3022
Query 1002 TGCCAGCAGGAAAGGAATGCCCTTTGCCCAGTGGGATGGTCCTACTGTGGTCTCCTGGTTGG------------ 1063
|||..||.|.||||||||||||||||||||.||||||||.||.||.||||||||||||.|||
Sbjct 3023 TGCGCGCCGAAAAGGAATGCCCTTTGCCCAATGGGATGGCCCCACGGTGGTCTCCTGGCTGGAGGCTGCCCCAG 3096
Query 1064 --------------------------------------------------AGCTCTGGGTGGGGATGCCTGCCT 1087
||||||||||||||||||||||||
Sbjct 3097 GAGTAACCACCCAAATGATGCTGAGTTGTTCCCCTGTGCCCGATGTCTGTAGCTCTGGGTGGGGATGCCTGCCT 3170
Query 1088 GGTATGTGGCAGCCTGCCGGGCCAACGTCAAGAGTGGTGCCATCATGTCCGCTCTGTCGGACACAGAGATCCAG 1161
||||||||||.||||||||||||||.|||||||||||.||||||||||||||..||||||||||.|||||||||
Sbjct 3171 GGTATGTGGCGGCCTGCCGGGCCAATGTCAAGAGTGGCGCCATCATGTCCGCCTTGTCGGACACGGAGATCCAG 3244
Query 1162 CGGGAGATCGGCATCAGCAATGCCCTGCACCGGCTCAAGCTCCGCCTGGCCATTCAGGAGATGGTGTCATTGAC 1235
||||||||||||||||||||||||||||||.||||||||||||||||||||||.|||||||||||||||.||||
Sbjct 3245 CGGGAGATCGGCATCAGCAATGCCCTGCACAGGCTCAAGCTCCGCCTGGCCATCCAGGAGATGGTGTCACTGAC 3318
Query 1236 CAGCCCCTCTGCCCCACCCACCTCCAGGACTTCTTCTGGGAATGTCTGGGTCACCCATGAAGAGATGGAAACTC 1309
.||||||||.||.|||||.|||||||||||||||||.||||||||||||||.|||||.||||||||||||||||
Sbjct 3319 GAGCCCCTCAGCTCCACCTACCTCCAGGACTTCTTCAGGGAATGTCTGGGTGACCCACGAAGAGATGGAAACTC 3392
Query 1310 TGGAAACATCTACTAAAACAGACAGTGAGGAGGGCAGCTGGGCTCAGACCCTGGCCTATGGGGACATGAACCAT 1383
|||.|||||||||.|||||| ||||||||||||||.||||||||.||.
Sbjct 3393 TGGCAACATCTACCAAAACA---------------------------ACCCTGGCCTATGGAGACATGAATCAC 3439
Query 1384 GAGTGGATTGGGAATGAATGGCTACCCAGCCTGGGGCTCCCGCAGTACCGCAGCTACTTCATGGAGTGCCTGGT 1457
|||||||||||.||.||||||||.|||||||||||||||||.||||||||.||.||||||||||||||||||||
Sbjct 3440 GAGTGGATTGGAAACGAATGGCTGCCCAGCCTGGGGCTCCCTCAGTACCGTAGTTACTTCATGGAGTGCCTGGT 3513
Query 1458 GGACGCCCGCATGCTGGACCACCTCACCAAGAAGGACCTGCGGGTCCACCTGAAGATGGTGGACAGCTTCCATC 1531
|||.||||||||||||||.|||||||||||||||||||||||.|||||.||.||||||||||||||.||||||.
Sbjct 3514 GGATGCCCGCATGCTGGATCACCTCACCAAGAAGGACCTGCGTGTCCATCTCAAGATGGTGGACAGTTTCCATA 3587
Query 1532 GAACCAGTCTTCAGTATGGCATCATGTGTCTGAAGAGGCTGAATTATGACCGGAAGGAGCTGGAGAAGAGGCGA 1605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||.||||||||.
Sbjct 3588 GAACCAGTCTTCAGTATGGCATCATGTGTCTGAAGAGGCTGAATTATGACCGGAAGGAACTGGAAAAGAGGCGG 3661
Query 1606 GAGGAGAGCCAGCATGAGATCAAGGATGTGTTAGTCTGGACCAACGACCAGGTGGTTCATTGGGTCCAGTCTAT 1679
||.|||||||||||||||||||||||||||.|.|||||||||||.||||||||||||||.||||||||||||
Sbjct 3662 GAAGAGAGCCAGCATGAGATCAAGGATGTGCTGGTCTGGACCAATGACCAGGTGGTTCACTGGGTCCAGTCT-- 3733
Query 1680 TGGGCTCCGGGACTACGCAGGAAACCTGCATGAGAGTGGTGTGCATGGAGCCTTGCTGGCCCTGGACGAGAACT 1753
Sbjct 3734 -------------------------------------------------------------------------- 3733
Query 1754 TCGACCACAACACACTGGCCCTGATCCTCCAGATCCCCACACAGAACACCCAGGCACGCCAAGTGATGGAAAGA 1827
Sbjct 3734 -------------------------------------------------------------------------- 3733
Query 1828 GAGTTCAATAACCTGTTGGCCTTGGGCACAGACCGGAAGCTGGATGACGGGGATGACAAGGTGTTTCGCCGCGC 1901
Sbjct 3734 -------------------------------------------------------------------------- 3733
Query 1902 GCCCTCCTGGAGGAAGCGCTTCCGGCCGCGGGAGCACCACGGTCGCGGCGGCATGCTCAGCGCTTCCGCGGAGA 1975
Sbjct 3734 -------------------------------------------------------------------------- 3733
Query 1976 CCCTCCCGGCGGGCTTCCGTGTGTCCACCCTGGGGACCCTGCAGCCCCCACCGGCCCCGCCAAAGAAGATCATG 2049
Sbjct 3734 -------------------------------------------------------------------------- 3733
Query 2050 CCTGAAGCTCACTCCCACTATCTCTACGGACACATGCTCTCCGCCTTCCGGGAC 2103
Sbjct 3734 ------------------------------------------------------ 3733
