Nucleotide Global Alignment

Description

Query:
TRCN0000480760
Subject:
XR_865550.1
Aligned Length:
2004
Identities:
1550
Gaps:
239

Alignment

Query    1  -----------------------------------------------ATGCCGACTGTCAGCGTGAAGCGTGAT  27
                                                           |||||||||||||||||.|||||.||.
Sbjct    1  TCGCTGAGGCCCCGCATGTGGCGCAGGCGCAGTGTCCACGACTCGCCATGCCGACTGTCAGCGTAAAGCGAGAC  74

Query   28  CTGCTCTTCCAAGCCCTGGGCCGCACCTACACTGACGAAGAATTTGATGAACTATGTTTTGAATTTGGTCTGGA  101
            |||||||||||||||||||||||.|||||||||||.|||||.|||||.|||||.||||||||||||||||||||
Sbjct   75  CTGCTCTTCCAAGCCCTGGGCCGGACCTACACTGATGAAGAGTTTGACGAACTGTGTTTTGAATTTGGTCTGGA  148

Query  102  GCTTGATGAAATTACATCTGAGAAGGAAATAATAAGTAAAGAACAAGGTAATGTAAAGGCAGCA-GGAGCCTCT  174
            .||||||||||||||.|||||.|||.||||.|||||.||.|||||||||.|||..|||||| || ||.|||||.
Sbjct  149  ACTTGATGAAATTACTTCTGAAAAGCAAATCATAAGCAAGGAACAAGGTCATGGGAAGGCA-CAGGGGGCCTCA  221

Query  175  GATGTTGTTCTTTACAAAATTGACGTCCCTGCCAATAGATATGATCTCCTGTGTCTGGAAGGATTGGTTCGAGG  248
            ||||||||.||||||||.|||||||||||||||||.|||||.||.||||||||||||||||||.|||.|||.||
Sbjct  222  GATGTTGTGCTTTACAAGATTGACGTCCCTGCCAACAGATACGACCTCCTGTGTCTGGAAGGACTGGCTCGGGG  295

Query  249  ACTTCAGGTCTTCAAAGAAAGGATAAAGGCTCCAGTGTATAAACGGGTAATGCCTGATGGAAAAATCCAGAAAT  322
            .||.||||||||||||||||||||.||.|||||.||.|||||.||.||.|||||..|.|||.|.|||||.||..
Sbjct  296  CCTCCAGGTCTTCAAAGAAAGGATCAAAGCTCCGGTATATAAGCGAGTGATGCCCAAGGGAGACATCCAAAAGC  369

Query  323  TGATTATCACAGAAGAGACAGCTAAGATACGTCCTTTTGCGGTAGCAGCAGTTCTCCGTAATATAAAGTTTACT  396
            ||.|||||||||||||||||||.||..|.||.||||||||.|||||||||||||||||.|||||.|||||.|||
Sbjct  370  TGGTTATCACAGAAGAGACAGCCAAAGTGCGCCCTTTTGCTGTAGCAGCAGTTCTCCGGAATATCAAGTTCACT  443

Query  397  AAAGATCGATATGACAGCTTCATTGAACTTCAGGAGAAATTACATCAGAATATTTGCAGGAAAAGAGCACTGGT  470
            |||||.|||||||||||||||||||||||||||||||||.||||.||||||||.||||||||||||||..||||
Sbjct  444  AAAGACCGATATGACAGCTTCATTGAACTTCAGGAGAAACTACACCAGAATATCTGCAGGAAAAGAGCGTTGGT  517

Query  471  TGCCATTGGTACCCATGATTTGGACACTTTGTCGGGCCCATTTACTTATACTGCAAAGCGTCCTTCAGATATCA  544
            |||.|||||.||.||.||.|||||||||||.||.||||||||||||||.||.||.||.||||||||||||||||
Sbjct  518  TGCTATTGGAACTCACGACTTGGACACTTTATCAGGCCCATTTACTTACACCGCGAAACGTCCTTCAGATATCA  591

Query  545  AATTCAAGCCTCTAAATAAGACCAAGGAGTATACAGCCTGTGAACTGATGAACATATACAAGACTGACAATCAC  618
            |||||||||||||.|||||||||||||||||||||||.||||||.|.|||||||||||||||||||||||.|||
Sbjct  592  AATTCAAGCCTCTGAATAAGACCAAGGAGTATACAGCTTGTGAATTAATGAACATATACAAGACTGACAACCAC  665

Query  619  CTGAAACATTATTTACATATCATTGAAAACAAACCCCTGTATCCAGTTATCTATGATAGCAATGGTGTCGTCCT  692
            ||.|||||||||||||||||||||||||..||.|||||||||||||||||||||||.|||||||||||.|||||
Sbjct  666  CTTAAACATTATTTACATATCATTGAAAGTAAGCCCCTGTATCCAGTTATCTATGACAGCAATGGTGTGGTCCT  739

Query  693  TTCAATGCCTCCCATCATCAATGGGGATCATTCCAGAATAACAGTAAATACTAGAAATATTTTTATTGAATGCA  766
            .||.||||||||.||.||.||||||.|||||||.|.||||||||||||||||||.|||||.|||||||||||||
Sbjct  740  GTCGATGCCTCCGATTATAAATGGGAATCATTCAAAAATAACAGTAAATACTAGGAATATATTTATTGAATGCA  813

Query  767  CGGGAACTGACTTTACTAAGGCAAAAATAGTTCTTGATATTATTGTCACCATGTTCAGTGAATATTGTGAGAAT  840
            |.||.||||||||.|||||.||||||||.||.|||||.||||||||||||||||||||||||.|.|||||.|||
Sbjct  814  CAGGGACTGACTTCACTAAAGCAAAAATCGTGCTTGACATTATTGTCACCATGTTCAGTGAACACTGTGAAAAT  887

Query  841  CAATTTACGGTCGAAGCTGCTGAAGTGGTTTTTCCTAATGGAAAATCACATACCTTTCCA-----------GAA  903
            ||.|||||.||.|||||.|.||||||.||||.||||||||||||||||..||||||||||           |||
Sbjct  888  CAGTTTACAGTTGAAGCAGTTGAAGTAGTTTCTCCTAATGGAAAATCAAGTACCTTTCCAATACCAAATATGAA  961

Query  904  T-TAG----------------------------------------------------------------CTTAC  912
            | |||                                                                |||||
Sbjct  962  TGTAGCCAGACTGGTATCAAACTCACGAGCCTCCTGCTTTAGCCCTCAGTGCTGTGACCCAGGAGCTGCCTTAC  1035

Query  913  CGAAAGGAGATGGTGAGAGCTGACCTAATTAACAAAAAAGTTGGAATCAGAGAAACTCCAGAAAATCTTGCCAA  986
            .||||||||||||||||||||||..||||||||||.|||||||||||||||||||||||.|.||||||.|||||
Sbjct 1036  AGAAAGGAGATGGTGAGAGCTGATTTAATTAACAAGAAAGTTGGAATCAGAGAAACTCCTGCAAATCTCGCCAA  1109

Query  987  ACTTCTGACCAGGATGTATTTAAAATCAGAAGTCATAGGTGATGGGAATCAGATTGAGATTGAAATCCCTCCAA  1060
            .||.|||||||||||||.|.|.||.|||||||||||||||||.||.||||||||||||.|||||||.|||||.|
Sbjct 1110  GCTCCTGACCAGGATGTGTCTGAAGTCAGAAGTCATAGGTGACGGCAATCAGATTGAGGTTGAAATTCCTCCGA  1183

Query 1061  CCAGAGCTGACATTATCCATGCATGTGATATTGTAGAAGATGCAGCTATTGCTTATGGATATAACAACATTCAG  1134
            |||||||.||..|.||||||||||||||.|||||.||.||.|||||||||||||||||.|||||||||||||||
Sbjct 1184  CCAGAGCAGATGTCATCCATGCATGTGACATTGTGGAGGACGCAGCTATTGCTTATGGCTATAACAACATTCAG  1257

Query 1135  ATGACTCTCCCGAAAACTTACACCATAGCTAATCAATTTCCTCTTAATAAGCTCACTGAACTTCTCCGACATGA  1208
            ||||||||.||||||||.||||||||||||||||||||||||||.||.||||||||.||.||.|||.|||.|||
Sbjct 1258  ATGACTCTGCCGAAAACGTACACCATAGCTAATCAATTTCCTCTCAACAAGCTCACCGAGCTCCTCAGACTTGA  1331

Query 1209  CATGGCAGCCGCTGGCTTCACTGAAGCACTTACCTTTGCCCTGTGCTCCCAAGAAGATATTGCTGATAAACTAG  1282
            ||||||.||.|||||||||||.||||||||.||.|||||.||||||||||||||||||||||||||.||.||.|
Sbjct 1332  CATGGCTGCGGCTGGCTTCACCGAAGCACTGACTTTTGCTCTGTGCTCCCAAGAAGATATTGCTGACAAGCTTG  1405

Query 1283  GTGTGGATATCTCTGCAACAAAGGCAGTCCACATAAGTAATCCTAAAACAGCTGAATTTCAGGTGGCACGCACT  1356
            |..|||||||||||||||||||||||||.||||||||||||||||||||.|||||.||.||||||||.||||||
Sbjct 1406  GCCTGGATATCTCTGCAACAAAGGCAGTGCACATAAGTAATCCTAAAACCGCTGAGTTCCAGGTGGCGCGCACT  1479

Query 1357  ACCCTTCTTCCTGGCCTCCTGAAGACCATAGCAGCAAATCGTAAGATGCCCCTTCCACTGAAACTGTTTGAAAT  1430
            |||||||||||||||||.||.||||||||.||||||||.||.||||||||||||||.||.||||||||||||||
Sbjct 1480  ACCCTTCTTCCTGGCCTTCTAAAGACCATTGCAGCAAACCGGAAGATGCCCCTTCCTCTCAAACTGTTTGAAAT  1553

Query 1431  CTCTGACATTGTAATAAAAGATTCTAATACAGATGTAGGTGCAAAAAACTACAGACATCTCTGTGCTGTTTATT  1504
            |||||||.|||||.|||||||||||...|.||||||||||||.|||||||||||.|||||||||||||||||||
Sbjct 1554  CTCTGACGTTGTAGTAAAAGATTCTGGCAAAGATGTAGGTGCGAAAAACTACAGGCATCTCTGTGCTGTTTATT  1627

Query 1505  ACAACAAGAATCCTGGGTTTGAGATCATTCATGGGCTGCTGGACAGAATTATGCAGTTGCTCGATGTGCCTCCT  1578
            |||||||||.|||.||||||||||||||.|||||..||||||||||||||||||||.|||||||||||||||||
Sbjct 1628  ACAACAAGACTCCCGGGTTTGAGATCATCCATGGCTTGCTGGACAGAATTATGCAGCTGCTCGATGTGCCTCCT  1701

Query 1579  GGTGAAGACAAG-GGGGGATATGTGATCAAAGCATCAGAAGGGCCTGCTTTCTTCCCCGGGCGATGTGCAGAGA  1651
            |||||.|| ||| |||||.||..||||||||||.||.|.|||..||||.||.|||||.||.||.|||||.||||
Sbjct 1702  GGTGAGGA-AAGCGGGGGCTACATGATCAAAGCGTCTGCAGGTTCTGCCTTTTTCCCTGGACGGTGTGCTGAGA  1774

Query 1652  TTTTTGCCAGGGGTCAAAGCGTCGGGAAGCTTGGGGTCCTTCATCCTGACGTTATCACCAAATTTGAGCTGACC  1725
            |.||||...|.|||||||||.|.||||||||.||.||||||||||||||.||||||||||||||||||||||||
Sbjct 1775  TCTTTGTTGGAGGTCAAAGCATTGGGAAGCTAGGCGTCCTTCATCCTGATGTTATCACCAAATTTGAGCTGACC  1848

Query 1726  ATGCCCTGCTCCTCCCTAGAAATCAATATTGGACCCTTTTTG--------------------------------  1767
            ||||||||.|||||.||.|||||||||||||..|||||||||                                
Sbjct 1849  ATGCCCTGTTCCTCTCTGGAAATCAATATTGAGCCCTTTTTGTGAGGTTGGTCTCTGAGTGTCCCTTTCTGCTC  1922

Query 1768  --------------------------------------------------------------------------  1767
                                                                                      
Sbjct 1923  CTGTGGTGTCCTTCAGCCCTCTTTTACAGCACATATCCATTTGTGCGTTAATGTTTAATAAAGTGAAATGTGCT  1996

Query 1768  ------  1767
                  
Sbjct 1997  ATCTGA  2002

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