Nucleotide Global Alignment
Description
- Query:
- TRCN0000480793
- Subject:
- XM_006530549.2
- Aligned Length:
- 1690
- Identities:
- 1120
- Gaps:
- 404
Alignment
Query 1 ATGAGCGCGGGCTCGGAGCGCGGGGCGGCGGCAACCCCCGGGGGTTTGCCCGCGCCCTGCGCCTCGAAGGTGGA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GCTGCGGCTCAGCTGCCGGCACCTGCTGGACCGCGACCCGCTCACCAAGTCCGACCCCAGCGTGGCGTTGCTGC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 AGCAGGCGCAGGGCCAGTGGGTGCAGGTGGGCAGAACCGAGGTGGTCCGGAGCAGCCTGCATCCCGTGTTCTCC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 AAGGTCTTCACGGTGGACTACTACTTCGAGGAGGTGCAGAGGCTGCGCTTTGAGGTGTACGACACGCATGGGCC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CAGCGGCTTCAGCTGTCAGGAGGACGATTTCCTGGGGGGCATGGAGTGCACCCTGGGGCAGATTGTGGCCCAGA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 AGAAGGTGACCCGCCCGCTGCTGCT-CAAGTTTGGCAGGAACGCTGGCAAGTCCACCATCACGGTGATCGCCGA 443
.||||.||.||..|||||.| |.| ||.||||||||.||||||||||||||||||||||||||.||.||
Sbjct 1 -----ATGACACGGCCATTGCTGTTGCGA-TTCGGCAGGAATGCTGGCAAGTCCACCATCACGGTGATAGCAGA 68
Query 444 GGACATCTCGGGGAACAACGGCTACGTGGAGCTCTCCTTCCGGGCCAGGAAGCTGGACGACAAGGACCTCTTCA 517
|||||||||.||||||||||||||.||||||||||||||||.||||.||||.|||||.||||||||||||||||
Sbjct 69 GGACATCTCTGGGAACAACGGCTATGTGGAGCTCTCCTTCCAGGCCCGGAAACTGGATGACAAGGACCTCTTCA 142
Query 518 GCAAGTCCGACCCCTTCCTGGAGCTCTACAGGGTCAACGACGACCAGGGCTT--GCAGCTGGTGTACAGGACGG 589
|||||||.|||||||||||.|||||.||..||||.||.|||||| |||..| ||||||.|||||||||||.|
Sbjct 143 GCAAGTCGGACCCCTTCCTAGAGCTGTATCGGGTTAATGACGAC--GGGAGTGAGCAGCTCGTGTACAGGACAG 214
Query 590 AGGTGGTGAAGAACAACCTGAACCCGGTGTGGGAGGCCTTCAAAGTCTCTCTGAGTTCCCTCTGCAGCTGCGAG 663
||||.|||||||||||.||.|||||.||||||||..|||||||.||.||.||||.|||.|||||||||||||||
Sbjct 215 AGGTAGTGAAGAACAATCTTAACCCAGTGTGGGAACCCTTCAAGGTGTCCCTGAATTCACTCTGCAGCTGCGAG 288
Query 664 GAGACAAGGCCTCTAAAGTGCCTGGTCTGGGATTACGACTCTCGAGGAAAGCACGACTTCATCGGAGAATTCTC 737
||||||.|||||||.|||||||||||||||||.||.|||||.|||||||||||.||||||||.||.||.|||.|
Sbjct 289 GAGACACGGCCTCTGAAGTGCCTGGTCTGGGACTATGACTCCCGAGGAAAGCATGACTTCATTGGCGACTTCAC 362
Query 738 TACCACCTTCGAGGAGATGCAGAAGGCCTTTGAGGAGG---GGCAGGCCCAGTGGGACTGTGTGAACCCCAAAT 808
.|||||.||||..||||||||||||||||||||||||| .||||||||||||||||||||||||..||||.|
Sbjct 363 CACCACGTTCGCAGAGATGCAGAAGGCCTTTGAGGAGGAGCAGCAGGCCCAGTGGGACTGTGTGAATGCCAAGT 436
Query 809 ACAAGCAGAAGAGACGCAGTTATAAGAACTCAGGAGTGGTCGTCCTGGCTGACCTCAAGTTCCACAGGGTGTAC 882
||||.|||||||..||||.|||.|||||.||.||.|||||..|||||||.|||||.|||.||||||||||..||
Sbjct 437 ACAAACAGAAGAAGCGCAATTACAAGAATTCCGGGGTGGTGATCCTGGCAGACCTGAAGCTCCACAGGGTCCAC 510
Query 883 TCCTTCCTGGACTATATCATGGGCGGCTGCCAGATCCACTTCACCGTGGCCATTGACTTCACCGCCTCCAATGG 956
|||||||||||.||.||||||||.||||||||||||||||..||.||.|||||.||||||||.||||||||.||
Sbjct 511 TCCTTCCTGGATTACATCATGGGTGGCTGCCAGATCCACTGTACGGTAGCCATCGACTTCACAGCCTCCAACGG 584
Query 957 AGACCCGCGGAACAGCTGCTCCCTGCACTACATCAACCCCTACCAGCCGAACGAGTACCTGAAGGCACTGGTGT 1030
.||||||.||||||||||||||||.|||.||||||||||.||||||||.|||||||||||||.||||.|||||.
Sbjct 585 TGACCCGAGGAACAGCTGCTCCCTCCACCACATCAACCCTTACCAGCCCAACGAGTACCTGAGGGCATTGGTGG 658
Query 1031 CCGTGGGCGAGATCTGCCAGGACTATGACAGTGACAAGAGGTTTTCCGCTTTGGGGTTTGGAGCCCGGATCCCT 1104
|.|||||||||.||||||||||.|||||||||||||||.|||||||.|||.||||.||||||||||||||||||
Sbjct 659 CAGTGGGCGAGGTCTGCCAGGATTATGACAGTGACAAGCGGTTTTCTGCTCTGGGATTTGGAGCCCGGATCCCT 732
Query 1105 CCCAAGTATGAGGTGTCCCATGACTTTGCCATCAATTTCAACCCTGAGGACGATGAGTGTGAAGGCATCCAGGG 1178
||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct 733 CCCAAGTATGAGGTGTCCCACGACTTTGCCATCAATTTCAACCCTGAGGACGATGAGTGTGAAGGAATCCAGGG 806
Query 1179 CGTGGTGGAGGCCTACCAGAACTGCCTGCCCAGGGTCCAGCTCTACGGCCCCACCAACGTGGCGCCCATCATCT 1252
||||||||||||||||||||||||||||||.|.|||.||||||||||||||||||||||||||.||||||||||
Sbjct 807 CGTGGTGGAGGCCTACCAGAACTGCCTGCCGAAGGTTCAGCTCTACGGCCCCACCAACGTGGCACCCATCATCT 880
Query 1253 CCAAGGTGGCACGCGTGGCGGCGGCCGAGGAGAGCACCGGGAAAGCCTCTCAATACTACATCCTGCTGATCCTG 1326
|.||||||||.|||.||||.|||||.|||||||||||.||..|.||.||||||||.|||||.|||||||||||.
Sbjct 881 CTAAGGTGGCCCGCATGGCAGCGGCTGAGGAGAGCACAGGAGAGGCTTCTCAATATTACATACTGCTGATCCTC 954
Query 1327 ACGGACGGCGTGGTGACCGACATGGCCGACACACGGGAGGCCATTGTGCGTGCCTCACGCCTGCCCATGTCCAT 1400
||||||||.||||||||.||.|||.|.|||||.||.||||||||||||||||||||.|.||||||||||||..|
Sbjct 955 ACGGACGGTGTGGTGACGGATATGTCGGACACTCGAGAGGCCATTGTGCGTGCCTCCCACCTGCCCATGTCTGT 1028
Query 1401 CATCATCGTGGGCGTGGGCAACGCCGACTTCACCGACATGCAGGTCCTGGACGGCGACGACGGCGTCCTGCGCT 1474
||||||.||.||.|||||||||||.||||||||.||.|||||..||.|.|||||.||.||.||.||||||||.|
Sbjct 1029 CATCATTGTTGGGGTGGGCAACGCTGACTTCACAGATATGCAAATCTTAGACGGGGATGATGGAGTCCTGCGTT 1102
Query 1475 CCCCACGGGGTGAGCCCGCGCTCCGGGACATCGTACAGTTCGTGCCCTTCCGGGAGCTCAAGAACGCATCCCCT 1548
||||||||||.|||||.||.||||||||||||||.|||||.|||||||||||.|||||.||||||||||||||.
Sbjct 1103 CCCCACGGGGCGAGCCTGCACTCCGGGACATCGTTCAGTTTGTGCCCTTCCGTGAGCTAAAGAACGCATCCCCC 1176
Query 1549 GCGGCGCTGGCCAAGTGCGTGCTGGCCGAGGTCCCGAAGCAGGTGGTGGAGTACTACAGCCACA--GAGGCCTG 1620
||.||.|||||||||||.|||.||||||||||.||.|||||||||||.||.||||||||||||| ||| |||
Sbjct 1177 GCAGCACTGGCCAAGTGTGTGTTGGCCGAGGTGCCAAAGCAGGTGGTTGAATACTACAGCCACAAGGAG--CTG 1248
Query 1621 CCCCCGAGAAGCCTGGGCGTCCCTG-CCGGAGAG------GCCAGCCCAG-GCTGCACACCG 1674
||.||..|||||||.|||| |||.| |.|||||| ||||||.||| || ||
Sbjct 1249 CCTCCTCGAAGCCTTGGCG-CCCAGACTGGAGAGGCTGCTGCCAGCTCAGCGC--CA----- 1302
