Nucleotide Global Alignment
Description
- Query:
- TRCN0000480793
- Subject:
- XR_001778387.1
- Aligned Length:
- 1865
- Identities:
- 1215
- Gaps:
- 474
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCCCCGCCCCTTCGCGGTCCCCTCCATCCCTTCCCCGCTGCATCGCCGCCCTACAGCCCCCGCTCTGTGGCGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGCCCGAGACACGTGTGCCCGCGCCCGGCGGGCGTGCGGGGAAGCGCGGCCACGCCTGGTCCGGCCACCATTTC 148
Query 1 ------------------------------------ATGAGCGCGGGCTCGGAGCGCGGGGCGGCGGCAACCCC 38
|||||||..|.|||||||||||.||.|| |||
Sbjct 149 TCCGGCGCCCACCGGTTCGAGTGCGGAGCCTGAAGCATGAGCGGCGACTCGGAGCGCGCGGTGG-------CCC 215
Query 39 CGGGGGT-TTGCCCGCGCCCTGCGCCTCGAAGGTGGAGCTGCGGCTCAGCTGCCGGCACCTGCTGGACCGCGAC 111
||||||| .||||.||.|||||||||||||||||||||||||||||.|||||||||||||||||||||||.|||
Sbjct 216 CGGGGGTGGTGCCTGCACCCTGCGCCTCGAAGGTGGAGCTGCGGCTGAGCTGCCGGCACCTGCTGGACCGGGAC 289
Query 112 CCGCTCACCAAGTCCGACCCCAGCGTGGCGTTGCTGCAGCAGGCGCAGGGCCAGTGGGTGCAGGTGGGCAGAAC 185
||..|.||||||||||||||||||||||.|.|||||||||||||.||||||||||||.|.|||||||.||||||
Sbjct 290 CCATTGACCAAGTCCGACCCCAGCGTGGTGCTGCTGCAGCAGGCACAGGGCCAGTGGCTACAGGTGGACAGAAC 363
Query 186 CGAGGTGGTCCGGAGCAGCCTGCATCCCGTGTTCTCCAAGGTCTTCACGGTGGACTACTACTTCGAGGAGGTGC 259
.||||||||...|||||||||||||||.||||||||||||||||||||.||.||||||||||||||||.|||||
Sbjct 364 AGAGGTGGTGAAGAGCAGCCTGCATCCTGTGTTCTCCAAGGTCTTCACTGTCGACTACTACTTCGAGGGGGTGC 437
Query 260 AGAGGCTGCGCTTTGAGGTGTACGACACGCATGGGCCCAGCGGCTTCAGCTGTCAGGAGGACGATTTCCTGGGG 333
|||.|||.||.|||||||||||.|||||.||.|||||.||.||..|.|..||.|||||.||.||.|||||.|||
Sbjct 438 AGAAGCTACGGTTTGAGGTGTATGACACCCACGGGCCTAGTGGGCTGACTTGCCAGGATGATGACTTCCTAGGG 511
Query 334 GGCATGGAGTGCACCCTGGGGCAGATTGTGGCCCAGAAGAAGGTGACCCGCCCGCTGCTGCT-CAAGTTTGGCA 406
|||||||||||.||||||||.||.||||||||||||||||||.||||.||.||..|||||.| |.| ||.||||
Sbjct 512 GGCATGGAGTGTACCCTGGGTCAAATTGTGGCCCAGAAGAAGATGACACGGCCATTGCTGTTGCGA-TTCGGCA 584
Query 407 GGAACGCTGGCAAGTCCACCATCACGGTGATCGCCGAGGACATCTCGGGGAACAACGGCTACGTGGAGCTCTCC 480
||||.||||||||||||||||||||||||||.||.|||||||||||.||||||||||||||.||||||||||||
Sbjct 585 GGAATGCTGGCAAGTCCACCATCACGGTGATAGCAGAGGACATCTCTGGGAACAACGGCTATGTGGAGCTCTCC 658
Query 481 TTCCGGGCCAGGAAGCTGGACGACAAGGACCTCTTCAGCAAGTCCGACCCCTTCCTGGAGCTCTACAGGGTCAA 554
||||.||||.||||.|||||.|||||||||||||||||||||||.|||||||||||.|||||.||..||||.||
Sbjct 659 TTCCAGGCCCGGAAACTGGATGACAAGGACCTCTTCAGCAAGTCGGACCCCTTCCTAGAGCTGTATCGGGTTAA 732
Query 555 CGACGACCAGGGCTT--GCAGCTGGTGTACAGGACGGAGGTGGTGAAGAACAACCTGAACCCGGTGTGGGAGGC 626
.|||||| |||..| ||||||.|||||||||||.|||||.|||||||||||.||.|||||.||||||||..|
Sbjct 733 TGACGAC--GGGAGTGAGCAGCTCGTGTACAGGACAGAGGTAGTGAAGAACAATCTTAACCCAGTGTGGGAACC 804
Query 627 CTTCAAAGTCTCTCTGAGTTCCCTCTGCAGCTGCGAGGAGACAAGGCCTCTAAAGTGCCTGGTCTGGGATTACG 700
||||||.||.||.||||.|||.|||||||||||||||||||||.|||||||.|||||||||||||||||.||.|
Sbjct 805 CTTCAAGGTGTCCCTGAATTCACTCTGCAGCTGCGAGGAGACACGGCCTCTGAAGTGCCTGGTCTGGGACTATG 878
Query 701 ACTCTCGAGGAAAGCACGACTTCATCGGAGAATTCTCTACCACCTTCGAGGAGATGCAGAAGGCCTTTGAGGAG 774
||||.|||||||||||.||||||||.||.||.|||.|.|||||.||||..||||||||||||||||||||||||
Sbjct 879 ACTCCCGAGGAAAGCATGACTTCATTGGCGACTTCACCACCACGTTCGCAGAGATGCAGAAGGCCTTTGAGGAG 952
Query 775 G---GGCAGGCCCAGTGGGACTGTGTGAACCCCAAATACAAGCAGAAGAGACGCAGTTATAAGAACTCAGGAGT 845
| .||||||||||||||||||||||||..||||.|||||.|||||||..||||.|||.|||||.||.||.||
Sbjct 953 GAGCAGCAGGCCCAGTGGGACTGTGTGAATGCCAAGTACAAACAGAAGAAGCGCAATTACAAGAATTCCGGGGT 1026
Query 846 GGTCGTCCTGGCTGACCTCAAGTTCCACAGGGTGTACTCCTTCCTGGACTATATCATGGGCGGCTGCCAGATCC 919
|||..|||||||.|||||.| |||||..|||||||||||||.||.||||||||.|||||||||||||
Sbjct 1027 GGTGATCCTGGCAGACCTGA--------AGGGTCCACTCCTTCCTGGATTACATCATGGGTGGCTGCCAGATCC 1092
Query 920 ACTTCACCGTGGCCATTGACTTCACCGCCTCCAATGGAGACCCGCGGAACAGCTGCTCCCTGCACTACATCAAC 993
|||..||.||.|||||.||||||||.||||||||.||.||||||.||||||||||||||||.|||.||||||||
Sbjct 1093 ACTGTACGGTAGCCATCGACTTCACAGCCTCCAACGGTGACCCGAGGAACAGCTGCTCCCTCCACCACATCAAC 1166
Query 994 CCCTACCAGCCGAACGAGTACCTGAAGGCACTGGTGTCCGTGGGCGAGATCTGCCAGGACTATGACAGTGACAA 1067
||.||||||||.|||||||||||||.||||.|||||.|.|||||||||.||||||||||.||||||||||||||
Sbjct 1167 CCTTACCAGCCCAACGAGTACCTGAGGGCATTGGTGGCAGTGGGCGAGGTCTGCCAGGATTATGACAGTGACAA 1240
Query 1068 GAGGTTTTCCGCTTTGGGGTTTGGAGCCCGGATCCCTCCCAAGTATGAGGTGTCCCATGACTTTGCCATCAATT 1141
|.|||||||.|||.||||.||||||||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct 1241 GCGGTTTTCTGCTCTGGGATTTGGAGCCCGGATCCCTCCCAAGTATGAGGTGTCCCACGACTTTGCCATCAATT 1314
Query 1142 TCAACCCTGAGGACGATGAGTGTGAAGGCATCCAGGGCGTGGTGGAGGCCTACCAGAACTGCCTGCCCAGGGTC 1215
||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||.|.|||.
Sbjct 1315 TCAACCCTGAGGACGATGAGTGTGAAGGAATCCAGGGCGTGGTGGAGGCCTACCAGAACTGCCTGCCGAAGGTT 1388
Query 1216 CAGCTCTACGGCCCCACCAACGTGGCGCCCATCATCTCCAAGGTGGCACGCGTGGCGGCGGCCGAGGAGAGCAC 1289
||||||||||||||||||||||||||.|||||||||||.||||||||.|||.||||.|||||.|||||||||||
Sbjct 1389 CAGCTCTACGGCCCCACCAACGTGGCACCCATCATCTCTAAGGTGGCCCGCATGGCAGCGGCTGAGGAGAGCAC 1462
Query 1290 CGGGAAAGCCTCTCAATACTACATCCTGCTGATCCTGACGGACGGCGTGGTGACCGACATGGCCGACACACGGG 1363
.||..|.||.||||||||.|||||.|||||||||||.||||||||.||||||||.||.|||.|.|||||.||.|
Sbjct 1463 AGGAGAGGCTTCTCAATATTACATACTGCTGATCCTCACGGACGGTGTGGTGACGGATATGTCGGACACTCGAG 1536
Query 1364 AGGCCATTGTGCGTGCCTCACGCCTGCCCATGTCCATCATCATCGTGGGCGTGGGCAACGCCGACTTCACCGAC 1437
|||||||||||||||||||.|.||||||||||||..|||||||.||
Sbjct 1537 AGGCCATTGTGCGTGCCTCCCACCTGCCCATGTCTGTCATCATTGT---------------------------- 1582
Query 1438 ATGCAGGTCCTGGACGGCGACGACGGCGTCCTGCGCTCCCCACGGGGTGAGCCCGCGCTCCGGGACATCGTACA 1511
Sbjct 1583 -------------------------------------------------------------------------- 1582
Query 1512 GTTCGTGCCCTTCCGGGAGCTCAAGAACGCATCCCCTGCGGCGCTGGCCAAGTGCGTGCTGGCCGAGGTCCCGA 1585
Sbjct 1583 -------------------------------------------------------------------------- 1582
Query 1586 AGCAGGTGGTGGAGTACTACAGCCACAGAGGCCTGCCCCCGAGAAGCCTGGGCGTCCCTGCCGGAGAGGCCAGC 1659
Sbjct 1583 -------------------------------------------------------------------------- 1582
Query 1660 CCAGGCTGCACACCG 1674
Sbjct 1583 --------------- 1582
