Nucleotide Global Alignment

Description

Query:
TRCN0000480865
Subject:
NM_001172309.1
Aligned Length:
1836
Identities:
1655
Gaps:
177

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAATGATATTTCCCAAAAGGCTGAGATTAAAGAAATGCTTGCTTCTGATGATGAGGAAGATGTATCTTCTAA  74

Query    1  ----------------------------------------------------------ATGGAGAAACAAAGAC  16
                                                                      ||||||||||||||||
Sbjct   75  AGTAGAAAAGGCTTATGTTCCAAAATTAACAGGAACTGTGAAGGGTAGATTTGCTGAAATGGAGAAACAAAGAC  148

Query   17  AAGAGGAACAAAGGAAGAGAACGGAGGAGGAACGAAAACGCAGAATTGAGCAGGATATGTTAGAAAAGAGGAAA  90
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AAGAGGAACAAAGGAAGAGAACGGAGGAGGAACGAAAACGCAGAATTGAGCAGGATATGTTAGAAAAGAGGAAA  222

Query   91  ATACAGCGTGAATTAGCAAAAAGGGCTGAAC------------------------------------------A  122
            |||||||||||||||||||||||||||||||                                          |
Sbjct  223  ATACAGCGTGAATTAGCAAAAAGGGCTGAACAGATTGAGGACATAAACAATACGGGAACTGAATCAGCATCAGA  296

Query  123  GGAAGGAGATGATTCACTACTTATAACTGTGGTACCTGTCAAATCATATAAAACATCTGGAAAAATGAAAAAGA  196
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GGAAGGAGATGATTCACTACTTATAACTGTGGTACCTGTCAAATCATATAAAACATCTGGAAAAATGAAAAAGA  370

Query  197  ATTTTGAGGATCTAGAAAAAGAACGTGAAGAGAAAGAAAGGATCAAGTACGAGGAAGATAAAAGAATAAGATAT  270
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ATTTTGAGGATCTAGAAAAAGAACGTGAAGAGAAAGAAAGGATCAAGTACGAGGAAGATAAAAGAATAAGATAT  444

Query  271  GAAGAACAACGACCATCTCTCAAGGAAGCAAAGTGTCTTTCATTAGTTATGGATGATGAAATAGAAAGTGAAGC  344
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GAAGAACAACGACCATCTCTCAAGGAAGCAAAGTGTCTTTCATTAGTTATGGATGATGAAATAGAAAGTGAAGC  518

Query  345  AAAAAAAGAATCACTTTCTCCCAGAAAATTGAAACTAACTTTTGAAGAACTGGAGCGACAAAGACAAGAAAACC  418
            ||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AAAAAAAGAATCACTTTCTCCCGGAAAATTGAAACTAACTTTTGAAGAACTGGAGCGACAAAGACAAGAAAACC  592

Query  419  GAAAGAAGCAAGCTGAAGAGGAAGCAAGAAAACGTTTAGAAGAAGAGAAGCGTGCTTTTGAAGAAGCAAGGCGG  492
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GAAAGAAGCAAGCTGAAGAGGAAGCAAGAAAACGTTTAGAAGAAGAGAAGCGTGCTTTTGAAGAAGCAAGGCGG  666

Query  493  CAAATGGTAAATGAAGATGAGGAAAACCAAGACACAGCAAAAATTTTTAAAGGGTACCGCCCTGGTAAACTCAA  566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CAAATGGTAAATGAAGATGAGGAAAACCAAGACACAGCAAAAATTTTTAAAGGGTACCGCCCTGGTAAACTCAA  740

Query  567  ACTCAGTTTTGAAGAAATGGAAAGGCAAAGAAGAGAAGATGAAAAAAGGAAAGCAGAAGAAGAAGCCAGAAGGA  640
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  ACTCAGTTTTGAAGAAATGGAAAGGCAAAGAAGAGAAGATGAAAAAAGGAAAGCAGAAGAAGAAGCCAGAAGGA  814

Query  641  GAATAGAGGAAGAAAAGAAGGCGTTTGCTGAAGCAAGGAGAAATATGGTAGTAGATGATGACTCCCCAGAGATG  714
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GAATAGAGGAAGAAAAGAAGGCGTTTGCTGAAGCAAGGAGAAATATGGTAGTAGATGATGACTCCCCAGAGATG  888

Query  715  TATAAGACAATCTCTCAAGAATTTCTTACACCGGGAAAACTGGAAATTAATTTTGAAGAATTATTAAAACAAAA  788
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  TATAAGACAATCTCTCAAGAATTTCTTACACCGGGAAAACTGGAAATTAATTTTGAAGAATTATTAAAACAAAA  962

Query  789  AATGGAAGAAGAAAAACGACGAACAGAGGAGGAACGGAAGCATAAGCTAGAAATGGAGAAACAAGAATTTGAAC  862
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  AATGGAAGAAGAAAAACGACGAACAGAGGAGGAACGGAAGCATAAGCTAGAAATGGAGAAACAAGAATTTGAAC  1036

Query  863  AACTGAGACAGGAAATGGGAGAGGAAGAGGAAGAAAATGAAACCTTTGGATTGAGCAGAGAATATGAAGAACTG  936
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  AACTGAGACAGGAAATGGGAGAGGAAGAGGAAGAAAATGAAACCTTTGGATTGAGCAGAGAATATGAAGAACTG  1110

Query  937  ATCAAATTAAAAAGGAGTGGCTCTATTCAAGCTAAAAACCTAAAAAGCAAGTTTGAAAAAATTGGACAGTTGTC  1010
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  ATCAAATTAAAAAGGAGTGGCTCTATTCAAGCTAAAAACCTAAAAAGCAAGTTTGAAAAAATTGGACAGTTGTC  1184

Query 1011  TGAAAAAGAAATACAGAAAAAAATAGAAGAAGAGCGAGCAAGAAGGAGAGCAATTGACCTTGAAATTAAAGAGC  1084
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  TGAAAAAGAAATACAGAAAAAAATAGAAGAAGAGCGAGCAAGAAGGAGAGCAATTGACCTTGAAATTAAAGAGC  1258

Query 1085  GAGAAGCTGAAAATTTTCATGAGGAAGATGATGTTGATGTTAGGCCTGCAAGAAAAAGCGAGGCTCCATTTACT  1158
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  GAGAAGCTGAAAATTTTCATGAGGAAGATGATGTTGATGTTAGGCCTGCAAGAAAAAGCGAGGCTCCATTTACT  1332

Query 1159  CACAAAGTGAATATGAAAGCTAGATTTGAACAAATGGCTAAGGCAAGAGAAGAAGAAGAACAAAGAAGAATTGA  1232
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  CACAAAGTGAATATGAAAGCTAGATTTGAACAAATGGCTAAGGCAAGAGAAGAAGAAGAACAAAGAAGAATTGA  1406

Query 1233  AGAACAAAAGTTACTACGCATGCAGTTTGAACAAAGGGAAATTGATGCAGCACTACAAAAGAAAAGAGAAGAGG  1306
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  AGAACAAAAGTTACTACGCATGCAGTTTGAACAAAGGGAAATTGATGCAGCACTACAAAAGAAAAGAGAAGAGG  1480

Query 1307  AGGAGGAGGAAGAAGGTAGCATCATGAATGGCTCCACTGCTGAAGATGAAGAGCAAACCAGATCAGGAGCTCCA  1380
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  AGGAGGAGGAAGAAGGTAGCATCATGAATGGCTCCACTGCTGAAGATGAAGAGCAAACCAGATCAGGAGCTCCA  1554

Query 1381  TGGTTCAAGAAGCCTCTTAAAAACACATCAGTTGTAGACAGTGAGCCAGTCAGATTTACGGTTAAAGTAACAGG  1454
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  TGGTTCAAGAAGCCTCTTAAAAACACATCAGTTGTAGACAGTGAGCCAGTCAGATTTACGGTTAAAGTAACAGG  1628

Query 1455  AGAACCCAAACCAGAAATTACATGGTGGTTTGAAGGAGAAATACTGCAGGATGGAGAAGACTATCAATATATTG  1528
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  AGAACCCAAACCAGAAATTACATGGTGGTTTGAAGGAGAAATACTGCAGGATGGAGAAGACTATCAATATATTG  1702

Query 1529  AAAGGGGAGAAACTTACTGCCTTTACTTACCAGAAACTTTCCCAGAAGATGGAGGAGAGTATATGTGTAAAGCA  1602
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  AAAGGGGAGAAACTTACTGCCTTTACTTACCAGAAACTTTCCCAGAAGATGGAGGAGAGTATATGTGTAAAGCA  1776

Query 1603  GTCAACAATAAAGGATCTGCAGCTAGTACCTGTATTCTTACCATTGAAACTGATGACTAC  1662
            |||||||||||||||||||||||||||||||||||||||||||||||||.| |.||.|  
Sbjct 1777  GTCAACAATAAAGGATCTGCAGCTAGTACCTGTATTCTTACCATTGAAAGT-AAGAAT--  1833

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