Nucleotide Global Alignment
Description
- Query:
- TRCN0000481038
- Subject:
- XM_017000931.1
- Aligned Length:
- 2541
- Identities:
- 515
- Gaps:
- 1983
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCATTTTTCAGAAATTTCCAACAGAATCTGCCTTCAGTGTCCTCTCTAGTAGACACAATCAGTAGTGCTGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGAGGATTTGACCACTGCTGTTGGGGAGGTCAGCTATGCTTTAACTGACTCAGTTGCTGAGCAGGTAACAAGTA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGATGAGTGGCTTTCGCCCAGAAGAGGAAAGCTCTGTAGCAGAAGAAGCTGTAGACACTTCTAAACAAAAAAAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCCGGGTTAACAGAAGTCTCCAAAAACACTAATTGTCAGAAAACACAAGCCAATTTAGAGCATAGAGCAAAGCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AATAAATACTTGTAAAACTTCACTAAAGCAAGATCAAGGAATACATGAAGAAAGAGTATTTAAACATGTTAATG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATAGGCAACAAACTCTATCAGAATATCAAGACACTGGTAATACTGGTGATTCTTCTTTGAAAGGCTACATGAAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AATGGTGGGATATCAGTTATCAGACAGAATACAAGGGCTGGATCTATTTGTCAAGAACTTGAAAGTACTGACAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ATGTAAAACAATTGGAGTAGGAATTTCCAATAATGGTAAGAATGATTTAAAGGAGGTAGGATATCAAGAAATGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AAGGAAATCAGAAGAATGCCAACGGAATAAACAAATTGTATGAGCAAAAGAAATATGTTGGTACAGATAATTGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAAAAGGAGGAATATTCTAAATCTCGACATGTATATTTGGGAAGAGATCAAGAGAATATGGGGCATTTCAATAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ATGTAAACATCTTCCCGATTTAGGGCATTCAGATCATTTAAAGAAAGCTGAAAAATGTGTTAAAAGTAAAGCAT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCAAAGGGAATGAGTGTTCAGGAAATGAATGTTCTTTAAAAGATATTTTGACAAGCAATAGGCATATGACACAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AAATCTATTATAAAAGAAGACATACATCCAGCACCATCAACTAATTCTAAAGATAAGTTATCTGGGAAAATTGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGAACAAATAAATTCAACGAAATACTGTAAAGTGAACGAAGACATAAAACCAAAGAAAACTGAGGCCATTTCTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCAAGAAAGGAACAGCAAAGAGTAAAGATGAAAAATATTCTAAGATAATACCAGAAAAAGATAATTCCTACATG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GACAAAGATGAGCATGGTTCATCCTCTGAAAGTGAAGATGAAGCGCTGGGTAAATATCATGAGGCCTTATCCAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AACACACAATTCCAGACTACCACTGGCAGATTCTAGACAAAGGAACTATGCTTGGGAAACAAGGCAGAAATACA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GTCCTCTATCGGCAGAGTATGATGGATACAGTAGTGAAGCATCAATAGATGAAGGAAACTGCATTCAGAGAATG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AGAAGAACACCCCCGCTGGATGAATTGCAGCCACCACCATATCAGGATGACAGTGGTTCTCCCCATCTGTCATG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TACACCCTCAGAAATTGGGGACAGTAAATGTGAATTTTCCCACTGCAGCAACAGTCCAAGATGCTCATATAACA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGTGCCCAAGTGAAGGAAGCACAGGTCATGAAATAGAAAGTTTTCATAATAAAGGATATGAAGAAGATGTTCCA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGTGACAGCACTGCAGTCCTGAGCCCTGAAGATATGTCAGCTCAAGGATCATCTTCGCAGCTTCCTAAACCTTT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGATCCTGAGCCAGAAGCTAAATATGGCACACTGGATGTGACTTTTGACTATGACTCACAAGAACAGAAGCTTC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TGGTAACAGTGACAGCTGTCACAGACATCCCAACATATAACAGGACAGGTGGCAACTCATGGCAAGTACACCTT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GTTCTTCTACCTATAAAGAAACAGAGAGCAAAAACCAGCATCCAGAGAGGACCATGCCCTGTCTTCACAGAAAC 1850
Query 1 --------------ATGTTGGA---GGGCT------------TCCAGATCTTGGTTCAGA----ATACAGTACA 41
||||||.| |.|.| |.|||.|| ||||.||| ||...|||||
Sbjct 1851 ATTTAAATTTAATCATGTTGAATCTGAGATGATTGGAAATTATGCAGTTC--GGTTTAGACTGTATGGTGTACA 1922
Query 42 ----AGGAACAA-------------------------------TTCACAAGAT--------------AAAATG- 65
|.|||.|| ||.||||.|| ||||||
Sbjct 1923 TCGCATGAAAAAAGAAAAGATTGTGGGGGAAAAGATTTTTTATTTAACAAAATTGAATCTTCAAGGGAAAATGT 1996
Query 66 -------------------------------------TGTCTGTGACTCCCAAATGAGTGTGTCAGAAATGTCT 102
||.||||||||||||||||||.||||||||||||||.
Sbjct 1997 CATTGCCTGTGATATTGGAACCTTCTTACAATCATTCTGGCTGTGACTCCCAAATGAGCGTGTCAGAAATGTCG 2070
Query 103 TGTAGTGAAAGTACATCCGCATGTCAGTCTCTCGAAGACGGGTCAGTTCCAGAAATTCTCATTAGCCTGCTTTA 176
||||||||||||||||||.|||||||||||||.|||.|.||.|||||||||||||||||.|||.||||||||||
Sbjct 2071 TGTAGTGAAAGTACATCCTCATGTCAGTCTCTTGAACATGGCTCAGTTCCAGAAATTCTTATTGGCCTGCTTTA 2144
Query 177 TAATGCCACAAATGGGAGACTATCAGCAGAAGTGATAAAAGGCAGCCACTTAAAAAATTGGGCAGCAAACAGAC 250
|||||||||||.|||.|||||||||||||||||||||||||||||||||||.|||||||.||||||||||||||
Sbjct 2145 TAATGCCACAACTGGAAGACTATCAGCAGAAGTGATAAAAGGCAGCCACTTCAAAAATTTGGCAGCAAACAGAC 2218
Query 251 CACCCAATACATATGTTAAGTTAACTCTACGGAAATCCACGGATCAAGAGATGTCCAAATGCAAGATATCCATC 324
||||||||||||||||||||||||||||||.|||.||||.||.|||||||||||||||||||||||.|||||||
Sbjct 2219 CACCCAATACATATGTTAAGTTAACTCTACTGAATTCCATGGGTCAAGAGATGTCCAAATGCAAGACATCCATC 2292
Query 325 CGCAGAGGGCGGCCAAATCCAGTATACAAGGAAACTTTTGT-TTTCAAAGTGACCCTATTTCAGCTTTCTCATG 397
||||||||||.|||||||||||||||.|||||||||||||| |||| |||||.|||||||||||||||||.|||
Sbjct 2293 CGCAGAGGGCAGCCAAATCCAGTATATAAGGAAACTTTTGTCTTTC-AAGTGGCCCTATTTCAGCTTTCTGATG 2365
Query 398 TGACACTCATGCTGTCTGTGTATAACAAAAGCAGCATGAGAAGAA---AGATGATAGGCTGGATTTATTTAGGT 468
||||||||||.||||||||||||||||||.|||||||||.||||| ||||||||||||||||||.|||||||
Sbjct 2366 TGACACTCATACTGTCTGTGTATAACAAACGCAGCATGAAAAGAAAAGAGATGATAGGCTGGATTTCTTTAGGT 2439
Query 469 CTCAACAGCTCTGG---AGAAGAACTCAATCACTGGACTGAAATGAAAGAGTCAAAAGGACGGCAAGTACGTAG 539
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||.|||||||.||||
Sbjct 2440 CTCAACAGCTCTGGAGAAGAAGAACTCAATCACTGGACTGAAATGAAAGAGTCAAAAGGACAGCAAGTATGTAG 2513
Query 540 ATGGCAGGCGTTGCTAGAGTCACGA 564
||||||.|||||||||||||||
Sbjct 2514 ATGGCATGCGTTGCTAGAGTCA--- 2535
