Nucleotide Global Alignment

Description

Query:
TRCN0000481075
Subject:
XM_017000233.1
Aligned Length:
2502
Identities:
1935
Gaps:
567

Alignment

Query    1  ATGACCGTGGAGTTCGAGGAGTGCGTCAAGGACTCCCCGCGCTTCAGGGCGACCATTGACGAGGTGGAGACGGA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CGTGGTGGAGATTGAGGCCAAACTGGACAAGCTGGTGAAGCTGTGCAGTGGCATGGTGGAAGCCGGTAAGGCCT  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  ACGTCAGCACCAGCAGGCTTTTCGTGAGCGGCGTCCGCGACCTGTCCCAGCAGTGCCAGGGCGACACCGTCATC  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  TCGGAATGTCTGCAGAGGTTCGCTGACAGCCTACAGGAGGTGGTGAACTACCACATGAACCTGTTTGACCAGGC  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CCAGAGGTCCGTGCGGCAGCAGCTCCAGAGCTTTGTCAAAGAGGATGTGCGGAAGTTCAAGGAGACAAAGAAGC  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  AGTTTGACAAGGTGCGGGAGGACCTGGAGCTGTCCCTGGTGAGGAACGCCCAGGCCCCGAGGCACCGGCCCCAC  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  GAGGTGGAGGAAGCCACCGGGGCCCTCACCCTCACCAGGAAGTGCTTCCGCCACCTGGCACTGGACTATGTGCT  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  CCAGATCAATGTTCTGCAGGCCAAGAAGAAGTTTGAGATCCTGGACTCTATGCTGTCCTTCATGCACGCCCAGT  592
                                                             |||||||||||||||||||||||||
Sbjct    1  -------------------------------------------------ATGCTGTCCTTCATGCACGCCCAGT  25

Query  593  CCAGCTTCTTCCAGCAGGGCTACAGCCTCCTGCACCAGCTGGACCCCTACATGAAGAAGCTGGCAGCCGAGCTG  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   26  CCAGCTTCTTCCAGCAGGGCTACAGCCTCCTGCACCAGCTGGACCCCTACATGAAGAAGCTGGCAGCCGAGCTG  99

Query  667  GACCAGCTGGTGATCGACTCTGCGGTGGAAAAGCGTGAGATGGAGCGAAAGCACGCCGCCATCCAGCAGCGGAC  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  100  GACCAGCTGGTGATCGACTCTGCGGTGGAAAAGCGTGAGATGGAGCGAAAGCACGCCGCCATCCAGCAGCGGAC  173

Query  741  GCTGCTGCAGGACTTCTCCTACGATGAGTCCAAAGTGGAGTTTGACGTGGACGCGCCCAGTGGGGTGGTGATGG  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  174  GCTGCTGCAGGACTTCTCCTACGATGAGTCCAAAGTGGAGTTTGACGTGGACGCGCCCAGTGGGGTGGTGATGG  247

Query  815  AGGGCTACCTCTTCAAGAGGGCCAGCAACGCTTTCAAGACATGGAACCGGCGCTGGTTCTCCATTCAGAACAGC  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  248  AGGGCTACCTCTTCAAGAGGGCCAGCAACGCTTTCAAGACATGGAACCGGCGCTGGTTCTCCATTCAGAACAGC  321

Query  889  CAGCTGGTCTACCAGAAGAAGCTCAAGGATGCCCTCACCGTGGTGGTGGATGACCTCCGCCTGTGCTCTGTGAA  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  322  CAGCTGGTCTACCAGAAGAAGCTCAAGGATGCCCTCACCGTGGTGGTGGATGACCTCCGCCTGTGCTCTGTGAA  395

Query  963  GCCGTGTGAGGACATCGAGCGGAGGTTCTGCTTCGAGGTGCTGTCACCCACCAAGAGCTGCATGCTGCAGGCTG  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  396  GCCGTGTGAGGACATCGAGCGGAGGTTCTGCTTCGAGGTGCTGTCACCCACCAAGAGCTGCATGCTGCAGGCTG  469

Query 1037  ACTCCGAGAAGCTGCGGCAAGCCTGGGTCCAGGCTGTGCAGGCCAGCATCGCCTCCGCCTACCGCGAGAGCCCT  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  470  ACTCCGAGAAGCTGCGGCAAGCCTGGGTCCAGGCTGTGCAGGCCAGCATCGCCTCCGCCTACCGCGAGAGCCCT  543

Query 1111  GACAGTTGCTATAGCGAGAGGCTGGACCGCACAGCATCCCCGTCCACGAGCAGCATCGACTCCGCCACCGACAC  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  544  GACAGTTGCTATAGCGAGAGGCTGGACCGCACAGCATCCCCGTCCACGAGCAGCATCGACTCCGCCACCGACAC  617

Query 1185  TCGGGAGCGTGGCGTGAAGGGCGAGAGTGTGCTGCAGCGTGTGCAGAGTGTGGCCGGCAACAGCCAGTGCGGCG  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  618  TCGGGAGCGTGGCGTGAAGGGCGAGAGTGTGCTGCAGCGTGTGCAGAGTGTGGCCGGCAACAGCCAGTGCGGCG  691

Query 1259  ACTGCGGCCAGCCGGACCCCCGCTGGGCCAGCATCAACCTGGGCGTGCTGCTCTGCATTGAGTGCTCCGGCATC  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  692  ACTGCGGCCAGCCGGACCCCCGCTGGGCCAGCATCAACCTGGGCGTGCTGCTCTGCATTGAGTGCTCCGGCATC  765

Query 1333  CACAGGAGCCTGGGTGTCCACTGCTCCAAGGTGCGGTCCCTGACGCTGGACTCGTGGGAGCCTGAGCTGCTAAA  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  766  CACAGGAGCCTGGGTGTCCACTGCTCCAAGGTGCGGTCCCTGACGCTGGACTCGTGGGAGCCTGAGCTGCTAAA  839

Query 1407  GCTGATGTGTGAGCTTGGAAACAGCGCTGTGAATCAGATCTATGAGGCCCAGTGTGAGGGTGCAGGCAGCAGGA  1480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  840  GCTGATGTGTGAGCTTGGAAACAGCGCTGTGAATCAGATCTATGAGGCCCAGTGTGAGGGTGCAGGCAGCAGGA  913

Query 1481  AACCCACAGCCAGCAGCTCCCGGCAGGACAAGGAGGCCTGGATCAAGGACAAATACGTGGAAAAGAAGTTTCTG  1554
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  914  AACCCACAGCCAGCAGCTCCCGGCAGGACAAGGAGGCCTGGATCAAGGACAAATACGTGGAAAAGAAGTTTCTG  987

Query 1555  CGGAAGGCGCCCATGGCACCAGCCCTGGAGGCCCCAAGACGCTGGAGGGTGCAGAAGTGCCTGCGGCCCCACAG  1628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  988  CGGAAGGCGCCCATGGCACCAGCCCTGGAGGCCCCAAGACGCTGGAGGGTGCAGAAGTGCCTGCGGCCCCACAG  1061

Query 1629  CTCTCCCCGCGCTCCCACTGCCCGCCGCAAGGTCCGGCTTGAGCCCGTTCTGCCCTGTGTGGCCGCTCTGTCCT  1702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1062  CTCTCCCCGCGCTCCCACTGCCCGCCGCAAGGTCCGGCTTGAGCCCGTTCTGCCCTGTGTGGCCGCTCTGTCCT  1135

Query 1703  CAGTGGGCACCCTGGATCGTAAGTTCCGCCGAGACTCCCTCTTCTGTCCCGACGAGCTGGACTCGCTCTTCTCC  1776
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1136  CAGTGGGCACCCTGGATCGTAAGTTCCGCCGAGACTCCCTCTTCTGTCCCGACGAGCTGGACTCGCTCTTCTCC  1209

Query 1777  TACTTCGACGCAGGGGCCGCAGGGGCTGGCCCTCGCAGTCTGAGTAGCGACAGTGGCCTTGGGGGCAGCTCGGA  1850
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1210  TACTTCGACGCAGGGGCCGCAGGGGCTGGCCCTCGCAGTCTGAGTAGCGACAGTGGCCTTGGGGGCAGCTCGGA  1283

Query 1851  TGGCAGCTCGGACGTCCTGGCTTTCGGCTCGGGCTCTGTGGTGGACAGCGTCACTGAGGAGGAGGGTGCAGAGT  1924
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1284  TGGCAGCTCGGACGTCCTGGCTTTCGGCTCGGGCTCTGTGGTGGACAGCGTCACTGAGGAGGAGGGTGCAGAGT  1357

Query 1925  CGGAGGAGTCCAGCGGTGAGGCAGACGGGGACACTGAGGCCGAGGCCTGGGGCCTGGCGGACGTGCGCGAGCTG  1998
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1358  CGGAGGAGTCCAGCGGTGAGGCAGACGGGGACACTGAGGCCGAGGCCTGGGGCCTGGCGGACGTGCGCGAGCTG  1431

Query 1999  CACCCGGGGCTCTTGGCGCACCGCGCAGCGCGTGCCCGCGACCTTCCTGCGCTGGCGGCGGCGCTGGCCCACGG  2072
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1432  CACCCGGGGCTCTTGGCGCACCGCGCAGCGCGTGCCCGCGACCTTCCTGCGCTGGCGGCGGCGCTGGCCCACGG  1505

Query 2073  GGCCGAGGTCAACTGGGCGGACGCGGAGGATGAGGGCAAGACGCCGCTGGTGCAGGCCGTGCTAGGGGGCTCCT  2146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1506  GGCCGAGGTCAACTGGGCGGACGCGGAGGATGAGGGCAAGACGCCGCTGGTGCAGGCCGTGCTAGGGGGCTCCT  1579

Query 2147  TGATCGTCTGTGAGTTCCTGCTGCAAAACGGAGCGGACGTGAACCAAAGAGACAGCCGGGGCCGGGCGCCCCTG  2220
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1580  TGATCGTCTGTGAGTTCCTGCTGCAAAACGGAGCGGACGTGAACCAAAGAGACAGCCGGGGCCGGGCGCCCCTG  1653

Query 2221  CACCACGCCACGCTGCTGGGCCGCACCGGCCAGGTTTGCCTGTTCCTGAAGCGGGGCGCGGACCAGCACGCCCT  2294
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1654  CACCACGCCACGCTGCTGGGCCGCACCGGCCAGGTTTGCCTGTTCCTGAAGCGGGGCGCGGACCAGCACGCCCT  1727

Query 2295  GGACCAAGAGCAGCGGGACCCGTTGGCCATCGCAGTGCAGGCGGCCAACGCTGACATCGTGACACTGCTCCGTC  2368
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1728  GGACCAAGAGCAGCGGGACCCGTTGGCCATCGCAGTGCAGGCGGCCAACGCTGACATCGTGACACTGCTCCGTC  1801

Query 2369  TGGCGCGCATGGCGGAGGAAATGCGCGAGGCCGAGGCTGCCCCTGGTCCCCCGGGCGCCCTGGCGGGCAGCCCC  2442
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1802  TGGCGCGCATGGCGGAGGAAATGCGCGAGGCCGAGGCTGCCCCTGGTCCCCCGGGCGCCCTGGCGGGCAGCCCC  1875

Query 2443  ACGGAGCTCCAGTTCCGCAGGTGTATCCAGGAGTTCATCAGCCTCCACCTGGAAGAGAGC  2502
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1876  ACGGAGCTCCAGTTCCGCAGGTGTATCCAGGAGTTCATCAGCCTCCACCTGGAAGAGAGC  1935

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