Nucleotide Global Alignment

Description

Query:
TRCN0000481120
Subject:
NR_149159.2
Aligned Length:
4780
Identities:
709
Gaps:
4070

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGACCTGCAGAGTGAAGAAAGCTGGTAATAGATGTCTGACAAACTAAAGAAAGACTTGTGTTACGATGCAAAGT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ATTGTTCCTGGGTGTGTCTGTGAGAGTATTGCCAAAGGAGAGCAGTGAACTGGGAAAAGCAGACCCACCTCAAT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GTGGGTGGGCAACATCCAATCGGCTGCCAGCTAGAATAAACCAGGCAGGAGAAGATGGAAGAGCCGACTTGCTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AATCTTCCAGCCTTCATCTTTCTCGTGTGCTGGATGCTTCCTGCCCTCAAACATCAGACTCCAGGTTCTTCGTC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TTTTGGACTCTCGGATTTACATCAGTGGTTTACCAGGTGCTCTCAGGCCTTCAGCCACACACTGAAGGCTGAAT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TGTCGGCTTCCCGACTTTTGAGATTTTGAAACTTGGACTGAGCTACTGCTGGCTTCCTTGCTTCTCAACTTACA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GATGGGACTTCACCTATAGATCATGATCAGAACATAATACCTGAAAATTTGCCAGCACCAACAGACAAATGTAA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ACTAAAATATCAGCAATGTAAAACTGAAATTAAAGAGGGCTATAAGCAGTATAGTCAGAGAAATGCAGAAAATA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CAAAATCAAATGTTACACATAAACAGTCTCCAAGAAACAAGATAGATGAAAAGTGTGTGCAAGATGAAGAAGCC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  AACACAGATGACCTTACGACTCTGGATAGGAAAGCCATCTTACAGCAAGGTTATGCAGACAACTCTTGCGATAA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  ACAACAGAGGGCAAGAAAATTGGATGCAGAAATTGTGGCTGCAGAGAAGAAGAAACAGATTGTTGCAGAGCAAG  814

Query    1  --ATGATAGACCACTTATCTAGGGCTGTCATCAGTGATCCAGAGCAAAATTTAGCCATTGAGCAAAAAGAAAGT  72
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TGATGATAGACCACTTATCTAGGGCTGTCATCAGTGATCCAGAGCAAAATTTAGCCATTGAGCAAAAAGAAAGT  888

Query   73  GATCATATCCTTCCAGATTCAAAGATGACACCTCTTCGATTTAGAAAAAGAACACTACATGAAACAAAGATAAG  146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
Sbjct  889  GATCATATCCTTCCAGATTCAAAGATGACACCTCTTCGATTTAGAAAAAGAACACTACATGAAACAAA------  956

Query  147  AACTCATTCTACATTAACTGAAAATGTGCTTTCTCATAAATTACAGTTTGATGGTAGGATCGTATCACGAACAA  220
                                                                                      
Sbjct  957  --------------------------------------------------------------------------  956

Query  221  ATGTGCTTCCTTTTATTCAAAAAAGCATTTATAGTCATCAGTGTGGACGAAGAAAAGGAAAACAATACCGACTT  294
                                                                                      
Sbjct  957  --------------------------------------------------------------------------  956

Query  295  GGTGATTTTTATGTTGGTGCAACCTTGACATTTTTGAGTTCTGATCATCTCAGCCTTCCAGAAAGCATCAAAGA  368
                           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  957  ---------------GGTGCAACCTTGACATTTTTGAGTTCTGATCATCTCAGCCTTCCAGAAAGCATCAAAGA  1015

Query  369  AAACACATTACTTAAACTCCGAATCACAAATATTGATCAAATAGCTTTGGATTCTCTCAAAACTGCTTCTATGG  442
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1016  AAACACATTACTTAAACTCCGAATCACAAATATTGATCAAATAGCTTTGGATTCTCTCAAAACTGCTTCTATGG  1089

Query  443  AACAGGAGGATGATATAATCATTCAAGAAACCAATGATAGGCTGGTCTTCAAAGCAATTCAAGATGTGCTAAAA  516
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1090  AACAGGAGGATGATATAATCATTCAAGAAACCAATGATAGGCTGGTCTTCAAAGCAATTCAAGATGTGCTAAAA  1163

Query  517  GAAAAACTACATAAAAGAGGTGTTCGTATTTTGACTGGATTGGGAAAATATTTTCAACAGTTGGACAAGGAAGG  590
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1164  GAAAAACTACATAAAAGAGGTGTTCGTATTTTGACTGGATTGGGAAAATATTTTCAACAGTTGGACAAGGAAGG  1237

Query  591  AAATGGACTTTTAGATAAGGCAGATTTTAAGCAAGCTCTAAAAGTGTTTCACTTAGAAGTGTCTGAAAAGGATT  664
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1238  AAATGGACTTTTAGATAAGGCAGATTTTAAGCAAGCTCTAAAAGTGTTTCACTTAGAAGTGTCTGAAAAGGATT  1311

Query  665  TTGAGTCTGCATGGCTAATTCTGAATGACAATGGCAATGGCAAGGTTGATTATGGAGAATTCAAACGTGGTATT  738
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1312  TTGAGTCTGCATGGCTAATTCTGAATGACAATGGCAATGGCAAGGTTGATTATGGAGAATTCAAACGTGGTATT  1385

Query  739  ATTGGTGAAATGAATGAATACAGGAAATCATATGTTCGAAAGGCCTTTATGAAACTGGATTTCAACAAAAGTGG  812
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1386  ATTGGTGAAATGAATGAATACAGGAAATCATATGTTCGAAAGGCCTTTATGAAACTGGATTTCAACAAAAGTGG  1459

Query  813  CAGTGTGCCTATTATAAACATAAGAAAATGTTACTGTGCAAAGAAGCATTCTCAAGTAATTTCAGGT-------  879
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.       
Sbjct 1460  CAGTGTGCCTATTATAAACATAAGAAAATGTTACTGTGCAAAGAAGCATTCTCAAGTAATTTCAGGCCATTCAA  1533

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 1534  CAGAGGAAGAAATCAAATCATCCTTTCTAGAAACATTAAAAGTTGCCTGCAGCAAGTCTGATGAAGTGTCATAT  1607

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 1608  GGTGAATTTGAAGATTACTATGAAGGTTTAAGTATAGGAATAGTAGATGATGAAGACTTTGTTAACATCTTACG  1681

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 1682  TACTCCATGGGGGATTTAGTCTTTAATAATACATATGTCATCAACACTAAGCATTTTATTGGAGAGATGATATC  1755

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 1756  AATGTAAAGGATGATCAAACACTGGAATATATTTTCCTAGGACTTCCTTTATTCTGGTTTCTTGTTTGTTTGTT  1829

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 1830  TTGTTTTGTTTTGTTTTCTCAAAAATGTTGAATTTGGAAAGAGAACTATCCAGAAAGATAGATGTAGGGGTGTG  1903

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 1904  TTAGTGTTTGTGCATGTGTATGCCTGTTCACATGTCCTTACATTTGTAAAGATATCTTTTTGGTTTATTACTTA  1977

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 1978  TCTTGCGTATATTTTAGAGGTCATTTTTTATTAACTTCAGTAGGAAAGTTACATCTGCATCAAACAATATGGCA  2051

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 2052  ACATCTATTTATTAACCAAGTTTCCTGTCCTTTCACATTGTTTTTTGCTACCTCTTCCTCAGAATATATTTGCC  2125

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 2126  ACCATGGTCAATTTGATAAATTAGAATTGGGCCCAAAGCCAGTGAGATAATTCAATGTGTTTTTAACACATGAA  2199

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 2200  AATATTAAAGGATATGCAAGAGAAATTTTTCAAGCAGTGTGATTATAGATGTTTTCTGTATATAGAATATTTCA  2273

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 2274  AATGATGGAGGTTTACCCCATGATGCTCATTTAAATACTGACTTGTCTTTTAAATCTGTCTTCTAAATTATGTA  2347

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 2348  CTGTTGTTGGTTAAATAGAGCACAATGTAGTTATTCTAATGCCCAGTTGTATTTGTTCTTTTATTCTGCTTTTT  2421

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 2422  AACTGTAATCCTTTTTACCAGCATACGATTGTTATTGAGCAATATGAAAGGGAAATGTTCTTTATTAAAATCAA  2495

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 2496  TACATTATCTTATTAAACAAAGATCCTAAAAGTATATTGTTGCATATATGAATCCAAGGAATAGTTCAGTAATT  2569

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 2570  ATTGCCTAAAATGTGAAAGCATATTTTGTATCCTAAAATGAATGTATGATATTCTAAACATCTGTTTTAGTATA  2643

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 2644  ACAAACAATTGAAACATTTCCTTCTAAATATATGTTATTTAATAGTTACATGTATTATAATCATTCTTTCTAAA  2717

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 2718  TTCTTTGCTAGTCATTTCTTCCTGGGAATACAGAGAAAAGAGACAACTTTATGAGTTGTTTTCAACTTCATAAT  2791

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 2792  TTTAAATTTTCTATGTTAATATAACATAAATTAGAAAAAATAAGTGATTCAAAATGAAAATATTTACTTTGTAG  2865

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 2866  AATATGACTTTAGACATATCACTGTATCCATCTATACTTGGCAGCAACATGAGAAGTGTGATACATGTGAACCC  2939

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 2940  AACAAATTCAAAGTTGCACTTTTCAAGATGTGAGAAGGTACTAAAACTTAATACTAAAACATGAGAGGGAAAAT  3013

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 3014  ATGTGTAAACCTCTAGTGCTATTTTCACTGGCTAAATTCTTTATTTCTTGATTTTTTTAAAAATTAGGTTATTA  3087

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 3088  AAATTAAAACAATATGCTAGAAGACATTTTGGCAGAAATAAGTCTATAACACTATTTTTGTCACATATCTTTTT  3161

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 3162  CTTGGAAAAATTTATCCAACTATAGACATCTTAAACCCTACAAATTGTTCTTGTTAAAAATGACTAATACTGGG  3235

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 3236  GGTGCTCAATATGCATATAGTGTTTTTCATTGATAATTTTTATTTAGTTCTTAAGAAACCTGTTCTTAATGTTG  3309

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 3310  GCATGTCACATTTTTCTGTTACTATAATCAGAAAATGTATAGTCTGTTATACTGTAAAAAAAAAAAAAAAGGGA  3383

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 3384  AGCTACTTTTGGAATGTAACGTGTTAACATGACAGCATACTCTTAGTATTAATCTTAATCTTCCTAACATAAGC  3457

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 3458  ATTCACATGTGGTTATTTGTAGGAAATAGCTCTATTTATGAGATTTTTTTTGGTGTATTTTGTTAGAATTGGTG  3531

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 3532  ACACAGTAAATCATTCTGCTTTTGGATTTGCCTGACTGCCTGCATTCTTCTTTGATTTTGGTATAGTAAAATCT  3605

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 3606  GTTATTTAGTGTTAAACTTAATAAAAGAGCATTTAAGAGAAGTGACATTTCAAACATCCACAACACAACTGACT  3679

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 3680  TTTGAAATCCTATGCTTAATAGTCTTTGTAATTCTAAAAGACCTTTTGAAAATGTTAAAATATTAAATTATATG  3753

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 3754  TTGTAATGCTGTTACATGAATTTTATAGTTATGTATATTTTATAGATCTCTATGTCTTTGTAAGTTACTTGCTT  3827

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 3828  GTATGCTATATAATTGCTTTCTCAGTTAACCATACTGTTTATGGAATTGTATATACTGATTTTTCTGTTTTTAT  3901

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 3902  ATTTTAAAAATAAAAGTTGAGAATTTTAAGGAAAAACATTTTATTAAAAAGACAAGGTATATTATATAGGAATT  3975

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 3976  TTAAGCTAACTTTTAATGGAAAGGACATACATATTTGCATGATGGAGCAATCACATTATAGTTAAACATGTATG  4049

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 4050  TCCCTGTTTTAAATTTTATAGTATATAAATATATGTGCTAATGAACCAGCGACTCTGCATAGAGGCAGTCACTT  4123

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 4124  AGAGTAATTAATAATCTTGATACAGCTGTAGATCATATCTTATTTTACATATTACTTTTGACTTCCAGTTTAAG  4197

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 4198  TTGTTTGTTATCAAGTATTTCAGGAGAGAATTGTGTACATTAGGCTATGTTTACTGCAGATTATGTAACATGCT  4271

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 4272  TTTATGAGATTATAGTTTGTAGTGCTTGCAAATATAAAACATGTACCCTGATAAACTATAATCACTACTAGGTT  4345

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 4346  GACCAGCAAGGACAAACATGAAAATGCTTAAAAAAAAGAAAGCGCTTAAAACAAAGAAATAGAAGGTAATGGGC  4419

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 4420  ATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGAT  4493

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 4494  CATGAGAAGAGGCTCTTGTCATACATATCGTTCCATTTTTATTTTAAAGTTCTATAAACTTCTGAGGTAAACTG  4567

Query  880  --------------------------------------------  879
                                                        
Sbjct 4568  ATTTCTTGGATGTACTTAATAAAGAATAAATGTTTCATATTGGA  4611

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