Nucleotide Global Alignment

Description

• Query: TRCN0000481120
• Subject: NR_149160.2
• Aligned Length: 4840
• Identities: 709
• Gaps: 4130

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGACCTGCAGAGTGAAGAAAGCTGGTAATAGATGTCTGACAAACTAAAGAAAGACTTGTGTTACCACAATTCAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ACAGCCCGGAATATCAAGATTCATCTTTTTCACTAATTGTGGCATTCACAGATGCAAAGTATTGTTCCTGGGTG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TGTCTGTGAGAGTATTGCCAAAGGAGAGCAGTGAACTGGGAAAAGCAGACCCACCTCAATGTGGGTGGGCAACA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TCCAATCGGCTGCCAGCTAGAATAAACCAGGCAGGAGAAGATGGAAGAGCCGACTTGCTGAATCTTCCAGCCTT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CATCTTTCTCGTGTGCTGGATGCTTCCTGCCCTCAAACATCAGACTCCAGGTTCTTCGTCTTTTGGACTCTCGG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ATTTACATCAGTGGTTTACCAGGTGCTCTCAGGCCTTCAGCCACACACTGAAGGCTGAATTGTCGGCTTCCCGA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CTTTTGAGATTTTGAAACTTGGACTGAGCTACTGCTGGCTTCCTTGCTTCTCAACTTACAGATGGGACTTCACC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TATAGATCATGATCAGAACATAATACCTGAAAATTTGCCAGCACCAACAGACAAATGTAAACTAAAATATCAGC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AATGTAAAACTGAAATTAAAGAGGGCTATAAGCAGTATAGTCAGAGAAATGCAGAAAATACAAAATCAAATGTT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  ACACATAAACAGTCTCCAAGAAACAAGATAGATGAAAAGTGTGTGCAAGATGAAGAAGCCAACACAGATGACCT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TACGACTCTGGATAGGAAAGCCATCTTACAGCAAGGTTATGCAGACAACTCTTGCGATAAACAACAGAGGGCAA  814

Query    1  --------------------------------------------------------------ATGATAGACCAC  12
                                                                          ||||||||||||
Sbjct  815  GAAAATTGGATGCAGAAATTGTGGCTGCAGAGAAGAAGAAACAGATTGTTGCAGAGCAAGTGATGATAGACCAC  888

Query   13  TTATCTAGGGCTGTCATCAGTGATCCAGAGCAAAATTTAGCCATTGAGCAAAAAGAAAGTGATCATATCCTTCC  86
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  TTATCTAGGGCTGTCATCAGTGATCCAGAGCAAAATTTAGCCATTGAGCAAAAAGAAAGTGATCATATCCTTCC  962

Query   87  AGATTCAAAGATGACACCTCTTCGATTTAGAAAAAGAACACTACATGAAACAAAGATAAGAACTCATTCTACAT  160
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||                    
Sbjct  963  AGATTCAAAGATGACACCTCTTCGATTTAGAAAAAGAACACTACATGAAACAAA--------------------  1016

Query  161  TAACTGAAAATGTGCTTTCTCATAAATTACAGTTTGATGGTAGGATCGTATCACGAACAAATGTGCTTCCTTTT  234
                                                                                      
Sbjct 1017  --------------------------------------------------------------------------  1016

Query  235  ATTCAAAAAAGCATTTATAGTCATCAGTGTGGACGAAGAAAAGGAAAACAATACCGACTTGGTGATTTTTATGT  308
                                                                                      
Sbjct 1017  --------------------------------------------------------------------------  1016

Query  309  TGGTGCAACCTTGACATTTTTGAGTTCTGATCATCTCAGCCTTCCAGAAAGCATCAAAGAAAACACATTACTTA  382
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1017  -GGTGCAACCTTGACATTTTTGAGTTCTGATCATCTCAGCCTTCCAGAAAGCATCAAAGAAAACACATTACTTA  1089

Query  383  AACTCCGAATCACAAATATTGATCAAATAGCTTTGGATTCTCTCAAAACTGCTTCTATGGAACAGGAGGATGAT  456
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1090  AACTCCGAATCACAAATATTGATCAAATAGCTTTGGATTCTCTCAAAACTGCTTCTATGGAACAGGAGGATGAT  1163

Query  457  ATAATCATTCAAGAAACCAATGATAGGCTGGTCTTCAAAGCAATTCAAGATGTGCTAAAAGAAAAACTACATAA  530
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1164  ATAATCATTCAAGAAACCAATGATAGGCTGGTCTTCAAAGCAATTCAAGATGTGCTAAAAGAAAAACTACATAA  1237

Query  531  AAGAGGTGTTCGTATTTTGACTGGATTGGGAAAATATTTTCAACAGTTGGACAAGGAAGGAAATGGACTTTTAG  604
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1238  AAGAGGTGTTCGTATTTTGACTGGATTGGGAAAATATTTTCAACAGTTGGACAAGGAAGGAAATGGACTTTTAG  1311

Query  605  ATAAGGCAGATTTTAAGCAAGCTCTAAAAGTGTTTCACTTAGAAGTGTCTGAAAAGGATTTTGAGTCTGCATGG  678
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1312  ATAAGGCAGATTTTAAGCAAGCTCTAAAAGTGTTTCACTTAGAAGTGTCTGAAAAGGATTTTGAGTCTGCATGG  1385

Query  679  CTAATTCTGAATGACAATGGCAATGGCAAGGTTGATTATGGAGAATTCAAACGTGGTATTATTGGTGAAATGAA  752
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1386  CTAATTCTGAATGACAATGGCAATGGCAAGGTTGATTATGGAGAATTCAAACGTGGTATTATTGGTGAAATGAA  1459

Query  753  TGAATACAGGAAATCATATGTTCGAAAGGCCTTTATGAAACTGGATTTCAACAAAAGTGGCAGTGTGCCTATTA  826
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1460  TGAATACAGGAAATCATATGTTCGAAAGGCCTTTATGAAACTGGATTTCAACAAAAGTGGCAGTGTGCCTATTA  1533

Query  827  TAAACATAAGAAAATGTTACTGTGCAAAGAAGCATTCTCAAGTAATTTCAGGT---------------------  879
            ||||||||||||||||||||||||||||||||||||||||||||||||||||.                     
Sbjct 1534  TAAACATAAGAAAATGTTACTGTGCAAAGAAGCATTCTCAAGTAATTTCAGGCCATTCAACAGAGGAAGAAATC  1607

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 1608  AAATCATCCTTTCTAGAAACATTAAAAGTTGCCTGCAGCAAGTCTGATGAAGTGTCATATGGTGAATTTGAAGA  1681

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 1682  TTACTATGAAGGTTTAAGTATAGGAATAGTAGATGATGAAGACTTTGTTAACATCTTACGTACTCCATGGGGGA  1755

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 1756  TTTAGTCTTTAATAATACATATGTCATCAACACTAAGCATTTTATTGGAGAGATGATATCAATGTAAAGGATGA  1829

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 1830  TCAAACACTGGAATATATTTTCCTAGGACTTCCTTTATTCTGGTTTCTTGTTTGTTTGTTTTGTTTTGTTTTGT  1903

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 1904  TTTCTCAAAAATGTTGAATTTGGAAAGAGAACTATCCAGAAAGATAGATGTAGGGGTGTGTTAGTGTTTGTGCA  1977

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 1978  TGTGTATGCCTGTTCACATGTCCTTACATTTGTAAAGATATCTTTTTGGTTTATTACTTATCTTGCGTATATTT  2051

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 2052  TAGAGGTCATTTTTTATTAACTTCAGTAGGAAAGTTACATCTGCATCAAACAATATGGCAACATCTATTTATTA  2125

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 2126  ACCAAGTTTCCTGTCCTTTCACATTGTTTTTTGCTACCTCTTCCTCAGAATATATTTGCCACCATGGTCAATTT  2199

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 2200  GATAAATTAGAATTGGGCCCAAAGCCAGTGAGATAATTCAATGTGTTTTTAACACATGAAAATATTAAAGGATA  2273

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 2274  TGCAAGAGAAATTTTTCAAGCAGTGTGATTATAGATGTTTTCTGTATATAGAATATTTCAAATGATGGAGGTTT  2347

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 2348  ACCCCATGATGCTCATTTAAATACTGACTTGTCTTTTAAATCTGTCTTCTAAATTATGTACTGTTGTTGGTTAA  2421

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 2422  ATAGAGCACAATGTAGTTATTCTAATGCCCAGTTGTATTTGTTCTTTTATTCTGCTTTTTAACTGTAATCCTTT  2495

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 2496  TTACCAGCATACGATTGTTATTGAGCAATATGAAAGGGAAATGTTCTTTATTAAAATCAATACATTATCTTATT  2569

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 2570  AAACAAAGATCCTAAAAGTATATTGTTGCATATATGAATCCAAGGAATAGTTCAGTAATTATTGCCTAAAATGT  2643

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 2644  GAAAGCATATTTTGTATCCTAAAATGAATGTATGATATTCTAAACATCTGTTTTAGTATAACAAACAATTGAAA  2717

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 2718  CATTTCCTTCTAAATATATGTTATTTAATAGTTACATGTATTATAATCATTCTTTCTAAATTCTTTGCTAGTCA  2791

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 2792  TTTCTTCCTGGGAATACAGAGAAAAGAGACAACTTTATGAGTTGTTTTCAACTTCATAATTTTAAATTTTCTAT  2865

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 2866  GTTAATATAACATAAATTAGAAAAAATAAGTGATTCAAAATGAAAATATTTACTTTGTAGAATATGACTTTAGA  2939

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 2940  CATATCACTGTATCCATCTATACTTGGCAGCAACATGAGAAGTGTGATACATGTGAACCCAACAAATTCAAAGT  3013

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 3014  TGCACTTTTCAAGATGTGAGAAGGTACTAAAACTTAATACTAAAACATGAGAGGGAAAATATGTGTAAACCTCT  3087

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 3088  AGTGCTATTTTCACTGGCTAAATTCTTTATTTCTTGATTTTTTTAAAAATTAGGTTATTAAAATTAAAACAATA  3161

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 3162  TGCTAGAAGACATTTTGGCAGAAATAAGTCTATAACACTATTTTTGTCACATATCTTTTTCTTGGAAAAATTTA  3235

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 3236  TCCAACTATAGACATCTTAAACCCTACAAATTGTTCTTGTTAAAAATGACTAATACTGGGGGTGCTCAATATGC  3309

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 3310  ATATAGTGTTTTTCATTGATAATTTTTATTTAGTTCTTAAGAAACCTGTTCTTAATGTTGGCATGTCACATTTT  3383

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 3384  TCTGTTACTATAATCAGAAAATGTATAGTCTGTTATACTGTAAAAAAAAAAAAAAAGGGAAGCTACTTTTGGAA  3457

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 3458  TGTAACGTGTTAACATGACAGCATACTCTTAGTATTAATCTTAATCTTCCTAACATAAGCATTCACATGTGGTT  3531

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 3532  ATTTGTAGGAAATAGCTCTATTTATGAGATTTTTTTTGGTGTATTTTGTTAGAATTGGTGACACAGTAAATCAT  3605

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 3606  TCTGCTTTTGGATTTGCCTGACTGCCTGCATTCTTCTTTGATTTTGGTATAGTAAAATCTGTTATTTAGTGTTA  3679

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 3680  AACTTAATAAAAGAGCATTTAAGAGAAGTGACATTTCAAACATCCACAACACAACTGACTTTTGAAATCCTATG  3753

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 3754  CTTAATAGTCTTTGTAATTCTAAAAGACCTTTTGAAAATGTTAAAATATTAAATTATATGTTGTAATGCTGTTA  3827

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 3828  CATGAATTTTATAGTTATGTATATTTTATAGATCTCTATGTCTTTGTAAGTTACTTGCTTGTATGCTATATAAT  3901

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 3902  TGCTTTCTCAGTTAACCATACTGTTTATGGAATTGTATATACTGATTTTTCTGTTTTTATATTTTAAAAATAAA  3975

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 3976  AGTTGAGAATTTTAAGGAAAAACATTTTATTAAAAAGACAAGGTATATTATATAGGAATTTTAAGCTAACTTTT  4049

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 4050  AATGGAAAGGACATACATATTTGCATGATGGAGCAATCACATTATAGTTAAACATGTATGTCCCTGTTTTAAAT  4123

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 4124  TTTATAGTATATAAATATATGTGCTAATGAACCAGCGACTCTGCATAGAGGCAGTCACTTAGAGTAATTAATAA  4197

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 4198  TCTTGATACAGCTGTAGATCATATCTTATTTTACATATTACTTTTGACTTCCAGTTTAAGTTGTTTGTTATCAA  4271

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 4272  GTATTTCAGGAGAGAATTGTGTACATTAGGCTATGTTTACTGCAGATTATGTAACATGCTTTTATGAGATTATA  4345

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 4346  GTTTGTAGTGCTTGCAAATATAAAACATGTACCCTGATAAACTATAATCACTACTAGGTTGACCAGCAAGGACA  4419

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 4420  AACATGAAAATGCTTAAAAAAAAGAAAGCGCTTAAAACAAAGAAATAGAAGGTAATGGGCATATATAAAATAAG  4493

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 4494  CCAAGCAAGAGAAGAGCAAAGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAGAAGAGGCT  4567

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 4568  CTTGTCATACATATCGTTCCATTTTTATTTTAAAGTTCTATAAACTTCTGAGGTAAACTGATTTCTTGGATGTA  4641

Query  880  ------------------------------  879
                                          
Sbjct 4642  CTTAATAAAGAATAAATGTTTCATATTGGA  4671