Nucleotide Global Alignment
Description
- Query:
- TRCN0000481156
- Subject:
- XM_006505986.3
- Aligned Length:
- 3346
- Identities:
- 2159
- Gaps:
- 908
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCTTGCCGAAGACGCTATTTGAGCTCCCTGGAAACCGGAAGCAGCCTCTCTACTGACCGATACAGTGTTGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGGCGAGGCCCCCAGCAGCGAGACTGGCACATCGCTGGACAGCCCCTCAGCCTACCATCAGGGTCCCCTGGTAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGGTTCCAGCCTGAGTCCAGACCACTACGAGCACACATCAGTGGGCGCCTATGGGCTGTACGCAGGGCCAGGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCACAACAGCGCACACGGAGGCCCCGGCTGCAGCACTCGACCTCAGTCCTGCGCAAGCAGGCTGAGGAGGAGGC 296
Query 1 ----------------------------------------------------------------------ATGC 4
||||
Sbjct 297 CATCAAGCGCTCTCGGTCACTCTCTGAGAGCTATGAGCTCTCTTCAGATCTGCAAGACAAGCAGGTGGAAATGC 370
Query 5 TAGAACGAAAGTATGGGGGGCGCCTGGTAACCCGCCATGCGGCCCGCACCATCCAGACGGCGTTTCGCCAGTAC 78
|||||||.|||||||||||.|||||.||.|||||||||||.|||||||||||||||||||||||.|||||.|||
Sbjct 371 TAGAACGCAAGTATGGGGGACGCCTCGTGACCCGCCATGCAGCCCGCACCATCCAGACGGCGTTCCGCCAATAC 444
Query 79 CAGATGAACAAGAACTTCGAGCGCTTGCGCAGCTCCATGTCAGAGAACCGCATGTCACGCCGGATTGTGCTGTC 152
|||||||||||||||||.||||||.||||||||||||||||.|||||||||||||||||.||.|||||||||||
Sbjct 445 CAGATGAACAAGAACTTTGAGCGCCTGCGCAGCTCCATGTCGGAGAACCGCATGTCACGTCGCATTGTGCTGTC 518
Query 153 CAACATGAGGATGCAGTTCTCCTTTGAGGGGCCTGAGAAAGTGCACAGCTCCTACTTCGAGGGGAAGCAGGTCT 226
||||||||||||||||||||||||||||||.||.|||||.|||||||||||||||||.|||||.||||||||||
Sbjct 519 CAACATGAGGATGCAGTTCTCCTTTGAGGGCCCCGAGAAGGTGCACAGCTCCTACTTTGAGGGAAAGCAGGTCT 592
Query 227 CAGTGACTAACGACGGCTCCCAGCTGGGAGCCCTGGTGTCCCCTGAGTGTGGTGACCTCAGCGAGCCCACCACC 300
|.||||||||.||.||||||||||||||.|||||||||.|..|.||.|||||.|||||.||.|| |||| .||
Sbjct 593 CTGTGACTAATGATGGCTCCCAGCTGGGGGCCCTGGTGCCATCAGAATGTGGAGACCTTAGTGA-CCCA--GCC 663
Query 301 CTCAAGTCTCCGGCCCCCTCCAGTGACTTTGCGGACGCCATCACCGAGCTGGAGGACGCCTTCTCTAGGCAAGT 374
|||||||||||.||||||||||||||||||||.||.||||||||.||.||||||||.||||||||.|||||.||
Sbjct 664 CTCAAGTCTCCAGCCCCCTCCAGTGACTTTGCAGATGCCATCACGGAACTGGAGGATGCCTTCTCCAGGCAGGT 737
Query 375 GAAATCACTGGCCGAGTCCATCGACGATGCCCTCAACTGCCGCAGCCTGCACACTGAGGAGGCACCGGCCCTGG 448
||||||.|||||.||.||||||||.|||||||||||.|||||||||||.||||.||||||||.|||.|||...|
Sbjct 738 GAAATCCCTGGCTGAATCCATCGATGATGCCCTCAATTGCCGCAGCCTACACAGTGAGGAGGTACCAGCCTCAG 811
Query 449 ATGCGGCGCGGGCCCGGGACACCGAACCCCAGACAGCCCTGCACGGCATGGACCACCGCAAACTGGACGAGATG 522
|..||||.|||||.||||||||.||.|||.|..|||..||.||.|||||||||||||||||||||||.||||||
Sbjct 812 ACACGGCCCGGGCTCGGGACACTGAGCCCAAACCAGGTCTACATGGCATGGACCACCGCAAACTGGATGAGATG 885
Query 523 ACGGCCTCGTACAGTGATGTCACCCTGTACATCGATGAGGAGGAGCTGTCGCCCCCTCTGCCCCTCTCGCAGGC 596
||.||||||||.||||||||.|||||.|||||.||||||||.||||||||.||.||.||.||.|||||.|||||
Sbjct 886 ACAGCCTCGTATAGTGATGTGACCCTCTACATTGATGAGGAAGAGCTGTCACCACCGCTTCCACTCTCACAGGC 959
Query 597 AGGGGACCGGCCGTCCAGCACCGAGTCGGACCTGCGGCTACGGGCTGGGGGCGCAGCCCCAGACTACTGGGCCC 670
.||.||.|||||.||||||||.|||||||||||||||||..||.|||||||.|||||||..||||||||||||.
Sbjct 960 TGGCGATCGGCCCTCCAGCACAGAGTCGGACCTGCGGCTGAGGTCTGGGGGTGCAGCCCAGGACTACTGGGCCT 1033
Query 671 TGGCCCACAAAGAGGACAAGGCTGACACGGACACGAGCTGCCGGAGCACGCCGTCGCTGGAGCGGCAGGNGCAG 744
||||||||||||||||||||||||||||||||||.||||||||.|||||.||.||.||||||||||..|.||..
Sbjct 1034 TGGCCCACAAAGAGGACAAGGCTGACACGGACACAAGCTGCCGAAGCACACCATCACTGGAGCGGCCAGAGCCA 1107
Query 745 CGGCTGCGGGTGGAGCATCTGCCGCTGCTCACCATCGAGCCACCCAGCGACAGCTCTGTGGACCTTAGTGACCG 818
|||||||||||||||||.|||||.|||||.|||||.|||||||||||.||.|||||.|||||.||.||||||||
Sbjct 1108 CGGCTGCGGGTGGAGCACCTGCCCCTGCTTACCATTGAGCCACCCAGTGATAGCTCCGTGGAACTCAGTGACCG 1181
Query 819 CTCGGAGCGGGGGTCACTCAAGAGGCAGAGTGCTTACGAGCGCAGCCTTGGCGGGCAGCAGGGCAGTCCCAAGC 892
|||.||.||..|.||||||||||||||||||||.||.|||||||||||.||.||||||||||||||.|||||||
Sbjct 1182 CTCAGATCGCAGCTCACTCAAGAGGCAGAGTGCCTATGAGCGCAGCCTCGGTGGGCAGCAGGGCAGCCCCAAGC 1255
Query 893 ATGGTCCCCACAGCGGCGCCCCCAAGAGCCTCCCCCGGGAGGAGCCTGAGTTGCGGCCCCGGCCCCCCAGGCCC 966
||||.||||||.|.|||.|||||||..||||||||.|||||||.|||||.||||||||.|||||||||||.||.
Sbjct 1256 ATGGCCCCCACGGTGGCCCCCCCAAAGGCCTCCCCAGGGAGGAACCTGAATTGCGGCCTCGGCCCCCCAGACCT 1329
Query 967 CTGGACAGCCACTTGGCCATCAATGGCTCAGCCAACCGGCAGAGCAAGTCTGAGTCGGACTACTCAGACGGTGA 1040
||.||.||.|||.|.|||||||||||.||||||||||||||||||||.||||||||.|||||||||||.||.||
Sbjct 1330 CTTGAGAGTCACCTAGCCATCAATGGTTCAGCCAACCGGCAGAGCAAATCTGAGTCTGACTACTCAGATGGGGA 1403
Query 1041 CAATGACAGCATCAACAGCACGTCCAACTCCAACGATACCATCAACTGCAGCTCCGAGTCATCGTCCCGTGACA 1114
|||||||||||||||||||||.|||||||||||.||.|||||.|||||||||||.|||||.||.||.||.||||
Sbjct 1404 CAATGACAGCATCAACAGCACCTCCAACTCCAATGACACCATAAACTGCAGCTCTGAGTCCTCATCACGGGACA 1477
Query 1115 GCCTGCGGGAGCAGACGCTCAGCAAGCAGACCTACCACAAGGAGGCCCGCAACAGCTGGGACTCGCCTGCCTTT 1188
||||||||||.|||||.||||||||||||||.||||||||||||.|||||||||||||||||||.||.||.||.
Sbjct 1478 GCCTGCGGGAACAGACACTCAGCAAGCAGACATACCACAAGGAGACCCGCAACAGCTGGGACTCTCCAGCTTTC 1551
Query 1189 AGCAACGATGTCATCCGCAAGAGGCACTACCGCATCGGCCTGAACCTCTTCAACAAGAAGCCTGAGAAGGGAGT 1262
|||||||||||||||||.||||||||.|||||.||.|||||.||.||||||||||||||||||||||||||..|
Sbjct 1552 AGCAACGATGTCATCCGTAAGAGGCATTACCGAATTGGCCTAAATCTCTTCAACAAGAAGCCTGAGAAGGGCAT 1625
Query 1263 CCAGTACCTCATCGAGCGTGGCTTTGTGCCCGACACGCCCGTCGGGGTGGCCCACTTCCTGCTGCAGCGCAAGG 1336
||||||.|||||.|||||.|||||.||||||||||||||.||.||.||||||||||||||||||||||||||||
Sbjct 1626 CCAGTATCTCATTGAGCGCGGCTTCGTGCCCGACACGCCAGTGGGAGTGGCCCACTTCCTGCTGCAGCGCAAGG 1699
Query 1337 GCCTCAGCCGGCAGATGATCGGCGAGTTCCTGGGCAACCGGCAGAAGCAGTTCAACCGTGACGTGCTCGACTGC 1410
||||||||||.|||||||||||.|||||||||||.||||||||||||||||||||||||||.|||||||||||.
Sbjct 1700 GCCTCAGCCGCCAGATGATCGGTGAGTTCCTGGGAAACCGGCAGAAGCAGTTCAACCGTGATGTGCTCGACTGT 1773
Query 1411 GTCGTGGACGAGATGGACTTCTCTACCATGGAGCTGGATGAGGCCCTCAGGAAATTCCAGGCGCACATCCGTGT 1484
||.|||||||||||||||||||||.||||||||||.|||||.||||||.||||.||||||||.||||||||.||
Sbjct 1774 GTTGTGGACGAGATGGACTTCTCTGCCATGGAGCTAGATGAAGCCCTCCGGAAGTTCCAGGCACACATCCGAGT 1847
Query 1485 CCAAGGGGAGGCTCAGAAAGTGGAGCGGCTCATAGAGGCGTTCAGCCAGCGCTACTGCATCTGCAACCCTGGGG 1558
|||||||||||||||||||||||||||||||||.|||||.|||||||||||.|||||..||||||||||.||||
Sbjct 1848 CCAAGGGGAGGCTCAGAAAGTGGAGCGGCTCATCGAGGCATTCAGCCAGCGGTACTGTGTCTGCAACCCAGGGG 1921
Query 1559 TGGTGCGGCAATTCCGGAACCCAGACACCATTTTCATCCTGGCCTTCGCCATCATCCTGCTGAACACCGACATG 1632
|||||||.||.||||||||||||||||||||.|||||||||||||||||||||||||||||.|||||.||||||
Sbjct 1922 TGGTGCGACAGTTCCGGAACCCAGACACCATCTTCATCCTGGCCTTCGCCATCATCCTGCTCAACACAGACATG 1995
Query 1633 TACAGCCCCAATGTCAAGCCCGAGCGGAAAATGAAGCTAGAGGACTTCATCAAGAACCTCCGAGGTGTGGACGA 1706
||||||||||||||||||||.|||||.|||||||||||.||||||||..||||||||||||||||||||||.||
Sbjct 1996 TACAGCCCCAATGTCAAGCCAGAGCGCAAAATGAAGCTGGAGGACTTTGTCAAGAACCTCCGAGGTGTGGATGA 2069
Query 1707 TGGTGAGGACATTCCCCGTGAGATGCTGATGGGGATCTATGAACGGATCCGTAAGCGAGAGCTAAAGACCAATG 1780
.|||||.|||||||||||.||||.|||.||.|||||||||||.||.||||||||||||||.||.||||||||.|
Sbjct 2070 CGGTGAAGACATTCCCCGGGAGACGCTAATTGGGATCTATGAGCGAATCCGTAAGCGAGAACTGAAGACCAACG 2143
Query 1781 AGGACCATGTGTCCCAGGTGCAGAAGGTGGAGAAGCTCATTGTGGGGAAAAAGCCGATCGGATCCCTGCATCCC 1854
|||||||.||||||||||||||||||||.|||||||||||.|||||.||.||||||||.|||||||||||||..
Sbjct 2144 AGGACCACGTGTCCCAGGTGCAGAAGGTTGAGAAGCTCATCGTGGGCAAGAAGCCGATTGGATCCCTGCATCAT 2217
Query 1855 GGGCTCGGCTGTGTGCTCTCTCTGCCCCACCGTCGGTTGGTCTGCTACTGCCGGCTCTTTGAGGTTCCAGACCC 1928
||.||.|||||||||||.|||||.|||||.||.||..|.|||||||||||||||||.|||||.|||||.|||||
Sbjct 2218 GGTCTTGGCTGTGTGCTGTCTCTTCCCCATCGACGACTAGTCTGCTACTGCCGGCTTTTTGAAGTTCCTGACCC 2291
Query 1929 AAACAAGCCCCAGAAACTCGGACTACACCAGCGAGAAATCTTCCTGTTCAACGACCTCCTGGTGGTCACCAAGA 2002
.|||||.||||||||.||.|||||||||||||||||.|||||||||||.||.||||||||||||||||||||||
Sbjct 2292 CAACAAACCCCAGAAGCTGGGACTACACCAGCGAGAGATCTTCCTGTTTAATGACCTCCTGGTGGTCACCAAGA 2365
Query 2003 TCTTCCAGAAGAAGAAGAACTCGGTGACGTACAGCTTCCGACAGTCCTTCTCCTTGTACGGCATGCAGGTCCTG 2076
||||||||||||||||||||||||||||.|||||||||||.||||||||||||.|.||||||||||||||||||
Sbjct 2366 TCTTCCAGAAGAAGAAGAACTCGGTGACATACAGCTTCCGGCAGTCCTTCTCCCTCTACGGCATGCAGGTCCTG 2439
Query 2077 CTCTTCGAGAACCAGTACTACCCCAATGGCATCCGGCTCACCTCGTCTGTCCCCGGAGCAGATATCAAAGTGTT 2150
||||||||||||||||||||.|||||||||||||||||.||.||..|||||||.||||||||.|||||||||.|
Sbjct 2440 CTCTTCGAGAACCAGTACTATCCCAATGGCATCCGGCTGACGTCTGCTGTCCCTGGAGCAGACATCAAAGTGCT 2513
Query 2151 AATAAACTTCAACGCCCCCAACCCTCAAGACCGGAAGAAATTCACCGATGACCTGCGGGAGTCCATTGCGGAAG 2224
|||||||||||||||.|||||.|||||.|||||||||||.|||||.||.||||||||||||||..|.||.||||
Sbjct 2514 AATAAACTTCAACGCTCCCAATCCTCAGGACCGGAAGAAGTTCACTGACGACCTGCGGGAGTCTGTCGCTGAAG 2587
Query 2225 TCCAAGAGATGGAGAAGCACAGGATAGAGTCGGAGCTCGAGAAGCAGAAAGGCGTCGTGCGGCCCAGCATGTCC 2298
|.||||||||||||||.|||.|.|||||||||||||||||||||||||||||.||||||||||||||||||||.
Sbjct 2588 TGCAAGAGATGGAGAAACACCGAATAGAGTCGGAGCTCGAGAAGCAGAAAGGTGTCGTGCGGCCCAGCATGTCA 2661
Query 2299 CAGTGCTCTAGCCTCAAAAAGGAGTCGGGCAACGGAACACTGAGCCGGGCCTGCCTGGACGACAGCTATGCCAG 2372
||||||||.|||||||||||||||||.||||||||.|||||||||.||||.||||||||.||||||||||||||
Sbjct 2662 CAGTGCTCCAGCCTCAAAAAGGAGTCAGGCAACGGGACACTGAGCAGGGCTTGCCTGGATGACAGCTATGCCAG 2735
Query 2373 CGGTGAGGGCCTCAAGCGCAGCGCCCTCAGCAGCTCCCTGCGGGACCTCTCGGAAGCCGGGG------------ 2434
.||.||||||||||||||||||||||||||||||||.|||.|.||||||||.|||| |||||
Sbjct 2736 TGGCGAGGGCCTCAAGCGCAGCGCCCTCAGCAGCTCACTGAGAGACCTCTCAGAAG-CGGGGAAGCGAGGGCGT 2808
Query 2435 ---------------------------------------TCCATCAT--------------------------- 2442
||||||||
Sbjct 2809 CGCAGCAGTGCGGGATCGCTAGAGAGCAATGTGGAAGGCTCCATCATTAGCAGTCCTCACATGCGCCGGAGAGC 2882
Query 2443 -------------------------------------------------------------------------- 2442
Sbjct 2883 GACCTCAACACGAGAGTGCCCATCTCGCCCCCCCCAGCCCGTGCCTAACTCCTCCTCTCTCCTGGGTTCTTTGT 2956
Query 2443 -------------------------------------------------------------------------- 2442
Sbjct 2957 TTGGGAGCAGGAGAGGGAAGCCCCCTCCCCAGGCCCACCCACCCTCAGCCCCTCCCCCAGCACCCCCTCACGCC 3030
Query 2443 -------------------------------------------------------------------------- 2442
Sbjct 3031 CATCACCCTGGGCCCTCAGAAGGCCCACTGCATGGACATCATGCACAGTACTGCCATGCACAGCAGAATCCTCC 3104
Query 2443 -------------------------------------------------------------------------- 2442
Sbjct 3105 GCCCTATCACCACCACCACCACTACCACCCACCCCCCCACCTGCAGCACACCCACCAGTACCACCATGGCCCAC 3178
Query 2443 -------------------------------------------------------------------------- 2442
Sbjct 3179 ACGGCGGGCACCCCCCGTATGGGGCCCATGCACACAGCCACCCGCCTCTGCCCACAGCTCACCCTGGTCATGCA 3252
Query 2443 -------------------------------------------------------------------------- 2442
Sbjct 3253 GGGCACTCAGCGCATCATCATGGGCAGCCCCCTGCCCCACCGCCCCCCACCAGCAGCAAGGCCAAGCCCAGCGG 3326
Query 2443 ---------------- 2442
Sbjct 3327 CATCAGCACAGTTGTG 3342