Nucleotide Global Alignment
Description
- Query:
- TRCN0000481156
- Subject:
- XM_006505991.3
- Aligned Length:
- 3075
- Identities:
- 2158
- Gaps:
- 636
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGAGCGCCGCCGAGCCCCCCGGCACGGCAGCCGAGTACCTGCAGGAGCTGACCCGGATCGTCGCGGCGCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCAGGAGCTGCTGGCGCAACGGCGGCGGCGCATCGAGGAGCTGGAGCGCCAAGTGGCGCGGCTGAGCCGTGAGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACGCCGGCCTGCTGGAGCGACACCGGCGACACCTGGCCGCGTGCGCTCGGCGCCCGGACCCGGGCCCTTCGCCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTGGGCGCCATCCCGGAGCTCGGCTGCCGCCGCGACAAGTCTGAAGAAGAAAGTTCTCGCAGCATCAGGAGCTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCTGGAAACCGGAAGCAGCCTCTCTACTGACCGATACAGTGTTGAGGGCGAGGCCCCCAGCAGCGAGACTGGCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CATCGCTGGACAGCCCCTCAGCCTACCATCAGGGTCCCCTGGTACCTGGTTCCAGCCTGAGTCCAGACCACTAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAGCACACATCAGTGGGCGCCTATGGGCTGTACGCAGGGCCAGGACCACAACAGCGCACACGGAGGCCCCGGCT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCAGCACTCGACCTCAGTCCTGCGCAAGCAGGCTGAGGAGGAGGCCATCAAGCGCTCTCGGTCACTCTCTGAGA 592
Query 1 -----------------------------------------ATGCTAGAACGAAAGTATGGGGGGCGCCTGGTA 33
|||||||||||.|||||||||||.|||||.||.
Sbjct 593 GCTATGAGCTCTCTTCAGATCTGCAAGACAAGCAGGTGGAAATGCTAGAACGCAAGTATGGGGGACGCCTCGTG 666
Query 34 ACCCGCCATGCGGCCCGCACCATCCAGACGGCGTTTCGCCAGTACCAGATGAACAAGAACTTCGAGCGCTTGCG 107
|||||||||||.|||||||||||||||||||||||.|||||.||||||||||||||||||||.||||||.||||
Sbjct 667 ACCCGCCATGCAGCCCGCACCATCCAGACGGCGTTCCGCCAATACCAGATGAACAAGAACTTTGAGCGCCTGCG 740
Query 108 CAGCTCCATGTCAGAGAACCGCATGTCACGCCGGATTGTGCTGTCCAACATGAGGATGCAGTTCTCCTTTGAGG 181
||||||||||||.|||||||||||||||||.||.||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CAGCTCCATGTCGGAGAACCGCATGTCACGTCGCATTGTGCTGTCCAACATGAGGATGCAGTTCTCCTTTGAGG 814
Query 182 GGCCTGAGAAAGTGCACAGCTCCTACTTCGAGGGGAAGCAGGTCTCAGTGACTAACGACGGCTCCCAGCTGGGA 255
|.||.|||||.|||||||||||||||||.|||||.|||||||||||.||||||||.||.||||||||||||||.
Sbjct 815 GCCCCGAGAAGGTGCACAGCTCCTACTTTGAGGGAAAGCAGGTCTCTGTGACTAATGATGGCTCCCAGCTGGGG 888
Query 256 GCCCTGGTGTCCCCTGAGTGTGGTGACCTCAGCGAGCCCACCACCCTCAAGTCTCCGGCCCCCTCCAGTGACTT 329
|||||||||.|..|.||.|||||.|||||.||.|| |||| .|||||||||||||.|||||||||||||||||
Sbjct 889 GCCCTGGTGCCATCAGAATGTGGAGACCTTAGTGA-CCCA--GCCCTCAAGTCTCCAGCCCCCTCCAGTGACTT 959
Query 330 TGCGGACGCCATCACCGAGCTGGAGGACGCCTTCTCTAGGCAAGTGAAATCACTGGCCGAGTCCATCGACGATG 403
|||.||.||||||||.||.||||||||.||||||||.|||||.||||||||.|||||.||.||||||||.||||
Sbjct 960 TGCAGATGCCATCACGGAACTGGAGGATGCCTTCTCCAGGCAGGTGAAATCCCTGGCTGAATCCATCGATGATG 1033
Query 404 CCCTCAACTGCCGCAGCCTGCACACTGAGGAGGCACCGGCCCTGGATGCGGCGCGGGCCCGGGACACCGAACCC 477
|||||||.|||||||||||.||||.||||||||.|||.|||...||..||||.|||||.||||||||.||.|||
Sbjct 1034 CCCTCAATTGCCGCAGCCTACACAGTGAGGAGGTACCAGCCTCAGACACGGCCCGGGCTCGGGACACTGAGCCC 1107
Query 478 CAGACAGCCCTGCACGGCATGGACCACCGCAAACTGGACGAGATGACGGCCTCGTACAGTGATGTCACCCTGTA 551
.|..|||..||.||.|||||||||||||||||||||||.||||||||.||||||||.||||||||.|||||.||
Sbjct 1108 AAACCAGGTCTACATGGCATGGACCACCGCAAACTGGATGAGATGACAGCCTCGTATAGTGATGTGACCCTCTA 1181
Query 552 CATCGATGAGGAGGAGCTGTCGCCCCCTCTGCCCCTCTCGCAGGCAGGGGACCGGCCGTCCAGCACCGAGTCGG 625
|||.||||||||.||||||||.||.||.||.||.|||||.|||||.||.||.|||||.||||||||.|||||||
Sbjct 1182 CATTGATGAGGAAGAGCTGTCACCACCGCTTCCACTCTCACAGGCTGGCGATCGGCCCTCCAGCACAGAGTCGG 1255
Query 626 ACCTGCGGCTACGGGCTGGGGGCGCAGCCCCAGACTACTGGGCCCTGGCCCACAAAGAGGACAAGGCTGACACG 699
||||||||||..||.|||||||.|||||||..||||||||||||.|||||||||||||||||||||||||||||
Sbjct 1256 ACCTGCGGCTGAGGTCTGGGGGTGCAGCCCAGGACTACTGGGCCTTGGCCCACAAAGAGGACAAGGCTGACACG 1329
Query 700 GACACGAGCTGCCGGAGCACGCCGTCGCTGGAGCGGCAGGNGCAGCGGCTGCGGGTGGAGCATCTGCCGCTGCT 773
|||||.||||||||.|||||.||.||.||||||||||..|.||..|||||||||||||||||.|||||.|||||
Sbjct 1330 GACACAAGCTGCCGAAGCACACCATCACTGGAGCGGCCAGAGCCACGGCTGCGGGTGGAGCACCTGCCCCTGCT 1403
Query 774 CACCATCGAGCCACCCAGCGACAGCTCTGTGGACCTTAGTGACCGCTCGGAGCGGGGGTCACTCAAGAGGCAGA 847
.|||||.|||||||||||.||.|||||.|||||.||.|||||||||||.||.||..|.||||||||||||||||
Sbjct 1404 TACCATTGAGCCACCCAGTGATAGCTCCGTGGAACTCAGTGACCGCTCAGATCGCAGCTCACTCAAGAGGCAGA 1477
Query 848 GTGCTTACGAGCGCAGCCTTGGCGGGCAGCAGGGCAGTCCCAAGCATGGTCCCCACAGCGGCGCCCCCAAGAGC 921
||||.||.|||||||||||.||.||||||||||||||.|||||||||||.||||||.|.|||.|||||||..||
Sbjct 1478 GTGCCTATGAGCGCAGCCTCGGTGGGCAGCAGGGCAGCCCCAAGCATGGCCCCCACGGTGGCCCCCCCAAAGGC 1551
Query 922 CTCCCCCGGGAGGAGCCTGAGTTGCGGCCCCGGCCCCCCAGGCCCCTGGACAGCCACTTGGCCATCAATGGCTC 995
||||||.|||||||.|||||.||||||||.|||||||||||.||.||.||.||.|||.|.|||||||||||.||
Sbjct 1552 CTCCCCAGGGAGGAACCTGAATTGCGGCCTCGGCCCCCCAGACCTCTTGAGAGTCACCTAGCCATCAATGGTTC 1625
Query 996 AGCCAACCGGCAGAGCAAGTCTGAGTCGGACTACTCAGACGGTGACAATGACAGCATCAACAGCACGTCCAACT 1069
||||||||||||||||||.||||||||.|||||||||||.||.|||||||||||||||||||||||.|||||||
Sbjct 1626 AGCCAACCGGCAGAGCAAATCTGAGTCTGACTACTCAGATGGGGACAATGACAGCATCAACAGCACCTCCAACT 1699
Query 1070 CCAACGATACCATCAACTGCAGCTCCGAGTCATCGTCCCGTGACAGCCTGCGGGAGCAGACGCTCAGCAAGCAG 1143
||||.||.|||||.|||||||||||.|||||.||.||.||.||||||||||||||.|||||.||||||||||||
Sbjct 1700 CCAATGACACCATAAACTGCAGCTCTGAGTCCTCATCACGGGACAGCCTGCGGGAACAGACACTCAGCAAGCAG 1773
Query 1144 ACCTACCACAAGGAGGCCCGCAACAGCTGGGACTCGCCTGCCTTTAGCAACGATGTCATCCGCAAGAGGCACTA 1217
||.||||||||||||.|||||||||||||||||||.||.||.||.|||||||||||||||||.||||||||.||
Sbjct 1774 ACATACCACAAGGAGACCCGCAACAGCTGGGACTCTCCAGCTTTCAGCAACGATGTCATCCGTAAGAGGCATTA 1847
Query 1218 CCGCATCGGCCTGAACCTCTTCAACAAGAAGCCTGAGAAGGGAGTCCAGTACCTCATCGAGCGTGGCTTTGTGC 1291
|||.||.|||||.||.||||||||||||||||||||||||||..|||||||.|||||.|||||.|||||.||||
Sbjct 1848 CCGAATTGGCCTAAATCTCTTCAACAAGAAGCCTGAGAAGGGCATCCAGTATCTCATTGAGCGCGGCTTCGTGC 1921
Query 1292 CCGACACGCCCGTCGGGGTGGCCCACTTCCTGCTGCAGCGCAAGGGCCTCAGCCGGCAGATGATCGGCGAGTTC 1365
||||||||||.||.||.||||||||||||||||||||||||||||||||||||||.|||||||||||.||||||
Sbjct 1922 CCGACACGCCAGTGGGAGTGGCCCACTTCCTGCTGCAGCGCAAGGGCCTCAGCCGCCAGATGATCGGTGAGTTC 1995
Query 1366 CTGGGCAACCGGCAGAAGCAGTTCAACCGTGACGTGCTCGACTGCGTCGTGGACGAGATGGACTTCTCTACCAT 1439
|||||.||||||||||||||||||||||||||.|||||||||||.||.|||||||||||||||||||||.||||
Sbjct 1996 CTGGGAAACCGGCAGAAGCAGTTCAACCGTGATGTGCTCGACTGTGTTGTGGACGAGATGGACTTCTCTGCCAT 2069
Query 1440 GGAGCTGGATGAGGCCCTCAGGAAATTCCAGGCGCACATCCGTGTCCAAGGGGAGGCTCAGAAAGTGGAGCGGC 1513
||||||.|||||.||||||.||||.||||||||.||||||||.|||||||||||||||||||||||||||||||
Sbjct 2070 GGAGCTAGATGAAGCCCTCCGGAAGTTCCAGGCACACATCCGAGTCCAAGGGGAGGCTCAGAAAGTGGAGCGGC 2143
Query 1514 TCATAGAGGCGTTCAGCCAGCGCTACTGCATCTGCAACCCTGGGGTGGTGCGGCAATTCCGGAACCCAGACACC 1587
||||.|||||.|||||||||||.|||||..||||||||||.|||||||||||.||.||||||||||||||||||
Sbjct 2144 TCATCGAGGCATTCAGCCAGCGGTACTGTGTCTGCAACCCAGGGGTGGTGCGACAGTTCCGGAACCCAGACACC 2217
Query 1588 ATTTTCATCCTGGCCTTCGCCATCATCCTGCTGAACACCGACATGTACAGCCCCAATGTCAAGCCCGAGCGGAA 1661
||.|||||||||||||||||||||||||||||.|||||.||||||||||||||||||||||||||.|||||.||
Sbjct 2218 ATCTTCATCCTGGCCTTCGCCATCATCCTGCTCAACACAGACATGTACAGCCCCAATGTCAAGCCAGAGCGCAA 2291
Query 1662 AATGAAGCTAGAGGACTTCATCAAGAACCTCCGAGGTGTGGACGATGGTGAGGACATTCCCCGTGAGATGCTGA 1735
|||||||||.||||||||..||||||||||||||||||||||.||.|||||.|||||||||||.||||.|||.|
Sbjct 2292 AATGAAGCTGGAGGACTTTGTCAAGAACCTCCGAGGTGTGGATGACGGTGAAGACATTCCCCGGGAGACGCTAA 2365
Query 1736 TGGGGATCTATGAACGGATCCGTAAGCGAGAGCTAAAGACCAATGAGGACCATGTGTCCCAGGTGCAGAAGGTG 1809
|.|||||||||||.||.||||||||||||||.||.||||||||.||||||||.||||||||||||||||||||.
Sbjct 2366 TTGGGATCTATGAGCGAATCCGTAAGCGAGAACTGAAGACCAACGAGGACCACGTGTCCCAGGTGCAGAAGGTT 2439
Query 1810 GAGAAGCTCATTGTGGGGAAAAAGCCGATCGGATCCCTGCATCCCGGGCTCGGCTGTGTGCTCTCTCTGCCCCA 1883
|||||||||||.|||||.||.||||||||.|||||||||||||..||.||.|||||||||||.|||||.|||||
Sbjct 2440 GAGAAGCTCATCGTGGGCAAGAAGCCGATTGGATCCCTGCATCATGGTCTTGGCTGTGTGCTGTCTCTTCCCCA 2513
Query 1884 CCGTCGGTTGGTCTGCTACTGCCGGCTCTTTGAGGTTCCAGACCCAAACAAGCCCCAGAAACTCGGACTACACC 1957
.||.||..|.|||||||||||||||||.|||||.|||||.|||||.|||||.||||||||.||.||||||||||
Sbjct 2514 TCGACGACTAGTCTGCTACTGCCGGCTTTTTGAAGTTCCTGACCCCAACAAACCCCAGAAGCTGGGACTACACC 2587
Query 1958 AGCGAGAAATCTTCCTGTTCAACGACCTCCTGGTGGTCACCAAGATCTTCCAGAAGAAGAAGAACTCGGTGACG 2031
|||||||.|||||||||||.||.||||||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct 2588 AGCGAGAGATCTTCCTGTTTAATGACCTCCTGGTGGTCACCAAGATCTTCCAGAAGAAGAAGAACTCGGTGACA 2661
Query 2032 TACAGCTTCCGACAGTCCTTCTCCTTGTACGGCATGCAGGTCCTGCTCTTCGAGAACCAGTACTACCCCAATGG 2105
|||||||||||.||||||||||||.|.||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct 2662 TACAGCTTCCGGCAGTCCTTCTCCCTCTACGGCATGCAGGTCCTGCTCTTCGAGAACCAGTACTATCCCAATGG 2735
Query 2106 CATCCGGCTCACCTCGTCTGTCCCCGGAGCAGATATCAAAGTGTTAATAAACTTCAACGCCCCCAACCCTCAAG 2179
|||||||||.||.||..|||||||.||||||||.|||||||||.||||||||||||||||.|||||.|||||.|
Sbjct 2736 CATCCGGCTGACGTCTGCTGTCCCTGGAGCAGACATCAAAGTGCTAATAAACTTCAACGCTCCCAATCCTCAGG 2809
Query 2180 ACCGGAAGAAATTCACCGATGACCTGCGGGAGTCCATTGCGGAAGTCCAAGAGATGGAGAAGCACAGGATAGAG 2253
||||||||||.|||||.||.||||||||||||||..|.||.|||||.||||||||||||||.|||.|.||||||
Sbjct 2810 ACCGGAAGAAGTTCACTGACGACCTGCGGGAGTCTGTCGCTGAAGTGCAAGAGATGGAGAAACACCGAATAGAG 2883
Query 2254 TCGGAGCTCGAGAAGCAGAAAGGCGTCGTGCGGCCCAGCATGTCCCAGTGCTCTAGCCTCAAAAAGGAGTCGGG 2327
|||||||||||||||||||||||.||||||||||||||||||||.||||||||.|||||||||||||||||.||
Sbjct 2884 TCGGAGCTCGAGAAGCAGAAAGGTGTCGTGCGGCCCAGCATGTCACAGTGCTCCAGCCTCAAAAAGGAGTCAGG 2957
Query 2328 CAACGGAACACTGAGCCGGGCCTGCCTGGACGACAGCTATGCCAGCGGTGAGGGCCTCAAGCGCAGCGCCCTCA 2401
||||||.|||||||||.||||.||||||||.||||||||||||||.||.|||||||||||||||||||||||||
Sbjct 2958 CAACGGGACACTGAGCAGGGCTTGCCTGGATGACAGCTATGCCAGTGGCGAGGGCCTCAAGCGCAGCGCCCTCA 3031
Query 2402 GCAGCTCCCTGCGGGACCTCTCGGAAGCCGGGGTCCATCAT 2442
|||||||.|||.|.||||||||.|||||.|||.||||||||
Sbjct 3032 GCAGCTCACTGAGAGACCTCTCAGAAGCGGGGCTCCATCAT 3072