Nucleotide Global Alignment
Description
- Query:
- TRCN0000481156
- Subject:
- XM_011241301.2
- Aligned Length:
- 3568
- Identities:
- 2159
- Gaps:
- 1130
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGAGCGCCGCCGAGCCCCCCGGCACGGCAGCCGAGTACCTGCAGGAGCTGACCCGGATCGTCGCGGCGCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCAGGAGCTGCTGGCGCAACGGCGGCGGCGCATCGAGGAGCTGGAGCGCCAAGTGGCGCGGCTGAGCCGTGAGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACGCCGGCCTGCTGGAGCGACACCGGCGACACCTGGCCGCGTGCGCTCGGCGCCCGGACCCGGGCCCTTCGCCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTGGGCGCCATCCCGGAGCTCGGCTGCCGCCGCGACAAGTCTGAAGAAGAAAGTTCTCGCAGCATCAGTGTTGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGGCGAGGCCCCCAGCAGCGAGACTGGCACATCGCTGGACAGCCCCTCAGCCTACCATCAGGGTCCCCTGGTAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTGGTTCCAGCCTGAGTCCAGACCACTACGAGCACACATCAGTGGGCGCCTATGGGCTGTACGCAGGGCCAGGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCACAACAGCGCACACGGAGGCCCCGGCTGCAGCACTCGACCTCAGTCCTGCGCAAGCAGGCTGAGGAGGAGGC 518
Query 1 ----------------------------------------------------------------------ATGC 4
||||
Sbjct 519 CATCAAGCGCTCTCGGTCACTCTCTGAGAGCTATGAGCTCTCTTCAGATCTGCAAGACAAGCAGGTGGAAATGC 592
Query 5 TAGAACGAAAGTATGGGGGGCGCCTGGTAACCCGCCATGCGGCCCGCACCATCCAGACGGCGTTTCGCCAGTAC 78
|||||||.|||||||||||.|||||.||.|||||||||||.|||||||||||||||||||||||.|||||.|||
Sbjct 593 TAGAACGCAAGTATGGGGGACGCCTCGTGACCCGCCATGCAGCCCGCACCATCCAGACGGCGTTCCGCCAATAC 666
Query 79 CAGATGAACAAGAACTTCGAGCGCTTGCGCAGCTCCATGTCAGAGAACCGCATGTCACGCCGGATTGTGCTGTC 152
|||||||||||||||||.||||||.||||||||||||||||.|||||||||||||||||.||.|||||||||||
Sbjct 667 CAGATGAACAAGAACTTTGAGCGCCTGCGCAGCTCCATGTCGGAGAACCGCATGTCACGTCGCATTGTGCTGTC 740
Query 153 CAACATGAGGATGCAGTTCTCCTTTGAGGGGCCTGAGAAAGTGCACAGCTCCTACTTCGAGGGGAAGCAGGTCT 226
||||||||||||||||||||||||||||||.||.|||||.|||||||||||||||||.|||||.||||||||||
Sbjct 741 CAACATGAGGATGCAGTTCTCCTTTGAGGGCCCCGAGAAGGTGCACAGCTCCTACTTTGAGGGAAAGCAGGTCT 814
Query 227 CAGTGACTAACGACGGCTCCCAGCTGGGAGCCCTGGTGTCCCCTGAGTGTGGTGACCTCAGCGAGCCCACCACC 300
|.||||||||.||.||||||||||||||.|||||||||.|..|.||.|||||.|||||.||.|| |||| .||
Sbjct 815 CTGTGACTAATGATGGCTCCCAGCTGGGGGCCCTGGTGCCATCAGAATGTGGAGACCTTAGTGA-CCCA--GCC 885
Query 301 CTCAAGTCTCCGGCCCCCTCCAGTGACTTTGCGGACGCCATCACCGAGCTGGAGGACGCCTTCTCTAGGCAAGT 374
|||||||||||.||||||||||||||||||||.||.||||||||.||.||||||||.||||||||.|||||.||
Sbjct 886 CTCAAGTCTCCAGCCCCCTCCAGTGACTTTGCAGATGCCATCACGGAACTGGAGGATGCCTTCTCCAGGCAGGT 959
Query 375 GAAATCACTGGCCGAGTCCATCGACGATGCCCTCAACTGCCGCAGCCTGCACACTGAGGAGGCACCGGCCCTGG 448
||||||.|||||.||.||||||||.|||||||||||.|||||||||||.||||.||||||||.|||.|||...|
Sbjct 960 GAAATCCCTGGCTGAATCCATCGATGATGCCCTCAATTGCCGCAGCCTACACAGTGAGGAGGTACCAGCCTCAG 1033
Query 449 ATGCGGCGCGGGCCCGGGACACCGAACCCCAGACAGCCCTGCACGGCATGGACCACCGCAAACTGGACGAGATG 522
|..||||.|||||.||||||||.||.|||.|..|||..||.||.|||||||||||||||||||||||.||||||
Sbjct 1034 ACACGGCCCGGGCTCGGGACACTGAGCCCAAACCAGGTCTACATGGCATGGACCACCGCAAACTGGATGAGATG 1107
Query 523 ACGGCCTCGTACAGTGATGTCACCCTGTACATCGATGAGGAGGAGCTGTCGCCCCCTCTGCCCCTCTCGCAGGC 596
||.||||||||.||||||||.|||||.|||||.||||||||.||||||||.||.||.||.||.|||||.|||||
Sbjct 1108 ACAGCCTCGTATAGTGATGTGACCCTCTACATTGATGAGGAAGAGCTGTCACCACCGCTTCCACTCTCACAGGC 1181
Query 597 AGGGGACCGGCCGTCCAGCACCGAGTCGGACCTGCGGCTACGGGCTGGGGGCGCAGCCCCAGACTACTGGGCCC 670
.||.||.|||||.||||||||.|||||||||||||||||..||.|||||||.|||||||..||||||||||||.
Sbjct 1182 TGGCGATCGGCCCTCCAGCACAGAGTCGGACCTGCGGCTGAGGTCTGGGGGTGCAGCCCAGGACTACTGGGCCT 1255
Query 671 TGGCCCACAAAGAGGACAAGGCTGACACGGACACGAGCTGCCGGAGCACGCCGTCGCTGGAGCGGCAGGNGCAG 744
||||||||||||||||||||||||||||||||||.||||||||.|||||.||.||.||||||||||..|.||..
Sbjct 1256 TGGCCCACAAAGAGGACAAGGCTGACACGGACACAAGCTGCCGAAGCACACCATCACTGGAGCGGCCAGAGCCA 1329
Query 745 CGGCTGCGGGTGGAGCATCTGCCGCTGCTCACCATCGAGCCACCCAGCGACAGCTCTGTGGACCTTAGTGACCG 818
|||||||||||||||||.|||||.|||||.|||||.|||||||||||.||.|||||.|||||.||.||||||||
Sbjct 1330 CGGCTGCGGGTGGAGCACCTGCCCCTGCTTACCATTGAGCCACCCAGTGATAGCTCCGTGGAACTCAGTGACCG 1403
Query 819 CTCGGAGCGGGGGTCACTCAAGAGGCAGAGTGCTTACGAGCGCAGCCTTGGCGGGCAGCAGGGCAGTCCCAAGC 892
|||.||.||..|.||||||||||||||||||||.||.|||||||||||.||.||||||||||||||.|||||||
Sbjct 1404 CTCAGATCGCAGCTCACTCAAGAGGCAGAGTGCCTATGAGCGCAGCCTCGGTGGGCAGCAGGGCAGCCCCAAGC 1477
Query 893 ATGGTCCCCACAGCGGCGCCCCCAAGAGCCTCCCCCGGGAGGAGCCTGAGTTGCGGCCCCGGCCCCCCAGGCCC 966
||||.||||||.|.|||.|||||||..||||||||.|||||||.|||||.||||||||.|||||||||||.||.
Sbjct 1478 ATGGCCCCCACGGTGGCCCCCCCAAAGGCCTCCCCAGGGAGGAACCTGAATTGCGGCCTCGGCCCCCCAGACCT 1551
Query 967 CTGGACAGCCACTTGGCCATCAATGGCTCAGCCAACCGGCAGAGCAAGTCTGAGTCGGACTACTCAGACGGTGA 1040
||.||.||.|||.|.|||||||||||.||||||||||||||||||||.||||||||.|||||||||||.||.||
Sbjct 1552 CTTGAGAGTCACCTAGCCATCAATGGTTCAGCCAACCGGCAGAGCAAATCTGAGTCTGACTACTCAGATGGGGA 1625
Query 1041 CAATGACAGCATCAACAGCACGTCCAACTCCAACGATACCATCAACTGCAGCTCCGAGTCATCGTCCCGTGACA 1114
|||||||||||||||||||||.|||||||||||.||.|||||.|||||||||||.|||||.||.||.||.||||
Sbjct 1626 CAATGACAGCATCAACAGCACCTCCAACTCCAATGACACCATAAACTGCAGCTCTGAGTCCTCATCACGGGACA 1699
Query 1115 GCCTGCGGGAGCAGACGCTCAGCAAGCAGACCTACCACAAGGAGGCCCGCAACAGCTGGGACTCGCCTGCCTTT 1188
||||||||||.|||||.||||||||||||||.||||||||||||.|||||||||||||||||||.||.||.||.
Sbjct 1700 GCCTGCGGGAACAGACACTCAGCAAGCAGACATACCACAAGGAGACCCGCAACAGCTGGGACTCTCCAGCTTTC 1773
Query 1189 AGCAACGATGTCATCCGCAAGAGGCACTACCGCATCGGCCTGAACCTCTTCAACAAGAAGCCTGAGAAGGGAGT 1262
|||||||||||||||||.||||||||.|||||.||.|||||.||.||||||||||||||||||||||||||..|
Sbjct 1774 AGCAACGATGTCATCCGTAAGAGGCATTACCGAATTGGCCTAAATCTCTTCAACAAGAAGCCTGAGAAGGGCAT 1847
Query 1263 CCAGTACCTCATCGAGCGTGGCTTTGTGCCCGACACGCCCGTCGGGGTGGCCCACTTCCTGCTGCAGCGCAAGG 1336
||||||.|||||.|||||.|||||.||||||||||||||.||.||.||||||||||||||||||||||||||||
Sbjct 1848 CCAGTATCTCATTGAGCGCGGCTTCGTGCCCGACACGCCAGTGGGAGTGGCCCACTTCCTGCTGCAGCGCAAGG 1921
Query 1337 GCCTCAGCCGGCAGATGATCGGCGAGTTCCTGGGCAACCGGCAGAAGCAGTTCAACCGTGACGTGCTCGACTGC 1410
||||||||||.|||||||||||.|||||||||||.||||||||||||||||||||||||||.|||||||||||.
Sbjct 1922 GCCTCAGCCGCCAGATGATCGGTGAGTTCCTGGGAAACCGGCAGAAGCAGTTCAACCGTGATGTGCTCGACTGT 1995
Query 1411 GTCGTGGACGAGATGGACTTCTCTACCATGGAGCTGGATGAGGCCCTCAGGAAATTCCAGGCGCACATCCGTGT 1484
||.|||||||||||||||||||||.||||||||||.|||||.||||||.||||.||||||||.||||||||.||
Sbjct 1996 GTTGTGGACGAGATGGACTTCTCTGCCATGGAGCTAGATGAAGCCCTCCGGAAGTTCCAGGCACACATCCGAGT 2069
Query 1485 CCAAGGGGAGGCTCAGAAAGTGGAGCGGCTCATAGAGGCGTTCAGCCAGCGCTACTGCATCTGCAACCCTGGGG 1558
|||||||||||||||||||||||||||||||||.|||||.|||||||||||.|||||..||||||||||.||||
Sbjct 2070 CCAAGGGGAGGCTCAGAAAGTGGAGCGGCTCATCGAGGCATTCAGCCAGCGGTACTGTGTCTGCAACCCAGGGG 2143
Query 1559 TGGTGCGGCAATTCCGGAACCCAGACACCATTTTCATCCTGGCCTTCGCCATCATCCTGCTGAACACCGACATG 1632
|||||||.||.||||||||||||||||||||.|||||||||||||||||||||||||||||.|||||.||||||
Sbjct 2144 TGGTGCGACAGTTCCGGAACCCAGACACCATCTTCATCCTGGCCTTCGCCATCATCCTGCTCAACACAGACATG 2217
Query 1633 TACAGCCCCAATGTCAAGCCCGAGCGGAAAATGAAGCTAGAGGACTTCATCAAGAACCTCCGAGGTGTGGACGA 1706
||||||||||||||||||||.|||||.|||||||||||.||||||||..||||||||||||||||||||||.||
Sbjct 2218 TACAGCCCCAATGTCAAGCCAGAGCGCAAAATGAAGCTGGAGGACTTTGTCAAGAACCTCCGAGGTGTGGATGA 2291
Query 1707 TGGTGAGGACATTCCCCGTGAGATGCTGATGGGGATCTATGAACGGATCCGTAAGCGAGAGCTAAAGACCAATG 1780
.|||||.|||||||||||.||||.|||.||.|||||||||||.||.||||||||||||||.||.||||||||.|
Sbjct 2292 CGGTGAAGACATTCCCCGGGAGACGCTAATTGGGATCTATGAGCGAATCCGTAAGCGAGAACTGAAGACCAACG 2365
Query 1781 AGGACCATGTGTCCCAGGTGCAGAAGGTGGAGAAGCTCATTGTGGGGAAAAAGCCGATCGGATCCCTGCATCCC 1854
|||||||.||||||||||||||||||||.|||||||||||.|||||.||.||||||||.|||||||||||||..
Sbjct 2366 AGGACCACGTGTCCCAGGTGCAGAAGGTTGAGAAGCTCATCGTGGGCAAGAAGCCGATTGGATCCCTGCATCAT 2439
Query 1855 GGGCTCGGCTGTGTGCTCTCTCTGCCCCACCGTCGGTTGGTCTGCTACTGCCGGCTCTTTGAGGTTCCAGACCC 1928
||.||.|||||||||||.|||||.|||||.||.||..|.|||||||||||||||||.|||||.|||||.|||||
Sbjct 2440 GGTCTTGGCTGTGTGCTGTCTCTTCCCCATCGACGACTAGTCTGCTACTGCCGGCTTTTTGAAGTTCCTGACCC 2513
Query 1929 AAACAAGCCCCAGAAACTCGGACTACACCAGCGAGAAATCTTCCTGTTCAACGACCTCCTGGTGGTCACCAAGA 2002
.|||||.||||||||.||.|||||||||||||||||.|||||||||||.||.||||||||||||||||||||||
Sbjct 2514 CAACAAACCCCAGAAGCTGGGACTACACCAGCGAGAGATCTTCCTGTTTAATGACCTCCTGGTGGTCACCAAGA 2587
Query 2003 TCTTCCAGAAGAAGAAGAACTCGGTGACGTACAGCTTCCGACAGTCCTTCTCCTTGTACGGCATGCAGGTCCTG 2076
||||||||||||||||||||||||||||.|||||||||||.||||||||||||.|.||||||||||||||||||
Sbjct 2588 TCTTCCAGAAGAAGAAGAACTCGGTGACATACAGCTTCCGGCAGTCCTTCTCCCTCTACGGCATGCAGGTCCTG 2661
Query 2077 CTCTTCGAGAACCAGTACTACCCCAATGGCATCCGGCTCACCTCGTCTGTCCCCGGAGCAGATATCAAAGTGTT 2150
||||||||||||||||||||.|||||||||||||||||.||.||..|||||||.||||||||.|||||||||.|
Sbjct 2662 CTCTTCGAGAACCAGTACTATCCCAATGGCATCCGGCTGACGTCTGCTGTCCCTGGAGCAGACATCAAAGTGCT 2735
Query 2151 AATAAACTTCAACGCCCCCAACCCTCAAGACCGGAAGAAATTCACCGATGACCTGCGGGAGTCCATTGCGGAAG 2224
|||||||||||||||.|||||.|||||.|||||||||||.|||||.||.||||||||||||||..|.||.||||
Sbjct 2736 AATAAACTTCAACGCTCCCAATCCTCAGGACCGGAAGAAGTTCACTGACGACCTGCGGGAGTCTGTCGCTGAAG 2809
Query 2225 TCCAAGAGATGGAGAAGCACAGGATAGAGTCGGAGCTCGAGAAGCAGAAAGGCGTCGTGCGGCCCAGCATGTCC 2298
|.||||||||||||||.|||.|.|||||||||||||||||||||||||||||.||||||||||||||||||||.
Sbjct 2810 TGCAAGAGATGGAGAAACACCGAATAGAGTCGGAGCTCGAGAAGCAGAAAGGTGTCGTGCGGCCCAGCATGTCA 2883
Query 2299 CAGTGCTCTAGCCTCAAAAAGGAGTCGGGCAACGGAACACTGAGCCGGGCCTGCCTGGACGACAGCTATGCCAG 2372
||||||||.|||||||||||||||||.||||||||.|||||||||.||||.||||||||.||||||||||||||
Sbjct 2884 CAGTGCTCCAGCCTCAAAAAGGAGTCAGGCAACGGGACACTGAGCAGGGCTTGCCTGGATGACAGCTATGCCAG 2957
Query 2373 CGGTGAGGGCCTCAAGCGCAGCGCCCTCAGCAGCTCCCTGCGGGACCTCTCGGAAGCCGGGG------------ 2434
.||.||||||||||||||||||||||||||||||||.|||.|.||||||||.|||| |||||
Sbjct 2958 TGGCGAGGGCCTCAAGCGCAGCGCCCTCAGCAGCTCACTGAGAGACCTCTCAGAAG-CGGGGAAGCGAGGGCGT 3030
Query 2435 ---------------------------------------TCCATCAT--------------------------- 2442
||||||||
Sbjct 3031 CGCAGCAGTGCGGGATCGCTAGAGAGCAATGTGGAAGGCTCCATCATTAGCAGTCCTCACATGCGCCGGAGAGC 3104
Query 2443 -------------------------------------------------------------------------- 2442
Sbjct 3105 GACCTCAACACGAGAGTGCCCATCTCGCCCCCCCCAGCCCGTGCCTAACTCCTCCTCTCTCCTGGGTTCTTTGT 3178
Query 2443 -------------------------------------------------------------------------- 2442
Sbjct 3179 TTGGGAGCAGGAGAGGGAAGCCCCCTCCCCAGGCCCACCCACCCTCAGCCCCTCCCCCAGCACCCCCTCACGCC 3252
Query 2443 -------------------------------------------------------------------------- 2442
Sbjct 3253 CATCACCCTGGGCCCTCAGAAGGCCCACTGCATGGACATCATGCACAGTACTGCCATGCACAGCAGAATCCTCC 3326
Query 2443 -------------------------------------------------------------------------- 2442
Sbjct 3327 GCCCTATCACCACCACCACCACTACCACCCACCCCCCCACCTGCAGCACACCCACCAGTACCACCATGGCCCAC 3400
Query 2443 -------------------------------------------------------------------------- 2442
Sbjct 3401 ACGGCGGGCACCCCCCGTATGGGGCCCATGCACACAGCCACCCGCCTCTGCCCACAGCTCACCCTGGTCATGCA 3474
Query 2443 -------------------------------------------------------------------------- 2442
Sbjct 3475 GGGCACTCAGCGCATCATCATGGGCAGCCCCCTGCCCCACCGCCCCCCACCAGCAGCAAGGCCAAGCCCAGCGG 3548
Query 2443 ---------------- 2442
Sbjct 3549 CATCAGCACAGTTGTG 3564
