Nucleotide Global Alignment
Description
- Query:
- TRCN0000481178
- Subject:
- NR_161462.1
- Aligned Length:
- 5432
- Identities:
- 1242
- Gaps:
- 4187
Alignment
Query 1 ----------------------------------------------------------------ATGAGGCGAC 10
||||||||||
Sbjct 1 GCACTGAGCCTAAGCAGCCGGTGATGGCGGCAGCGGCTGTGGTGGCTGCGGCGGGTCCGGGCCCATGAGGCGAC 74
Query 11 GAAGGAGGCGGGACGGCTTTTACCCAGCCCCGGACTTCCGAGACAGGGAAGCTGAGGACATGGCAGGAGTGTTT 84
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GAAGGAGGCGGGACGGCTTTTACCCAGCCCCGGACTTCCGAGACAGGGAAGCTGAGGACATGGCAGGAGTGTTT 148
Query 85 GACATAGACCTGGACCAGCCAGAGGACGCGGGCTCTGAGGATGAGCTGGAGGAGGGGGGTCAGTTAAATGAAAG 158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GACATAGACCTGGACCAGCCAGAGGACGCGGGCTCTGAGGATGAGCTGGAGGAGGGGGGTCAGTTAAATGAAAG 222
Query 159 CATGGACCATGGGGGAGTTGGACCATATGAACTTGGCATGGAACATTGTGAGAAATTTGAAATCTCAGAAACTA 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CATGGACCATGGGGGAGTTGGACCATATGAACTTGGCATGGAACATTGTGAGAAATTTGAAATCTCAGAAACTA 296
Query 233 GTGTGAACAGAGGGCCAGAAAAAATCAGACCAGAATGTTTTGAGCTACTTCGGGTACTTGGTAAAGGGGGCTAT 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GTGTGAACAGAGGGCCAGAAAAAATCAGACCAGAATGTTTTGAGCTACTTCGGGTACTTGGTAAAGGGGGCTAT 370
Query 307 GGAAAGGTTTTTCAAGTACGAAAAGTAACAGGAGCAAATACTGGGAAAATATTTGCCATGAAGGTGCTTAAAAA 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GGAAAGGTTTTTCAAGTACGAAAAGTAACAGGAGCAAATACTGGGAAAATATTTGCCATGAAGGTGCTTAAAAA 444
Query 381 GGCAATGATAGTAAGAAATGCTAAAGATACAGCTCATACAAAAGCAGAACGGAATATTCTGGAGGAAGTAAAGC 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GGCAATGATAGTAAGAAATGCTAAAGATACAGCTCATACAAAAGCAGAACGGAATATTCTGGAGGAAGTAAAGC 518
Query 455 ATCCCTTCATCGTGGATTTAATTTATGCCTTTCAGACTGGTGGAAAACTCTACCTCATCCTTGAGTATCTCAGT 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ATCCCTTCATCGTGGATTTAATTTATGCCTTTCAGACTGGTGGAAAACTCTACCTCATCCTTGAGTATCTCAGT 592
Query 529 GGAGGAGAACTATTTATGCAGTTAGAAAGAGAGGGAATATTTATGGAAGACACTGCCTGCTTTTACTTGGCAGA 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GGAGGAGAACTATTTATGCAGTTAGAAAGAGAGGGAATATTTATGGAAGACACTGCCTGCTTTTACTTGGCAGA 666
Query 603 AATCTCCATGGCTTTGGGGCATTTACATCAAAAGGGGATCATCTACAGAGACCTGAAGCCGGAGAATATCATGC 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AATCTCCATGGCTTTGGGGCATTTACATCAAAAGGGGATCATCTACAGAGACCTGAAGCCGGAGAATATCATGC 740
Query 677 TTAATCACCAAGGTCATGTGAAACTAACAGACTTTGGACTATGCAAAGAATCTATTCATGATGGAACAGTCACA 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TTAATCACCAAGGTCATGTGAAACTAACAGACTTTGGACTATGCAAAGAATCTATTCATGATGGAACAGTCACA 814
Query 751 CACACATTTTGTGGAACAATAGAATACATGGCCCCTGAAATCTTGATGAGAAGTGGCCACAATCGTGCTGTGGA 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CACACATTTTGTGGAACAATAGAATACATGGCCCCTGAAATCTTGATGAGAAGTGGCCACAATCGTGCTGTGGA 888
Query 825 TTGGTGGAGTTTGGGAGCATTAATGTATGACATGCTGACTGGAGCA----CCCCCATTCACTGGGGAGAATAGA 894
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 889 TTGGTGGAGTTTGGGAGCATTAATGTATGACATGCTGACTGGAGCAGTAGCCCCCATTCACTGGGGAGAATAGA 962
Query 895 AAGAAAACAATTGACAAAATCCTCAAATGTAAACTCAATTTGCCTCCCTACCTCACACAAGAAGCCAGAGATCT 968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AAGAAAACAATTGACAAAATCCTCAAATGTAAACTCAATTTGCCTCCCTACCTCACACAAGAAGCCAGAGATCT 1036
Query 969 GCTTAAAAAGCTGCTGAAAAGAAATGCTGCTTCTCGTCTGGGAGCTGGTCCTGGGGACGCTGGAGAAGTTCAAG 1042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GCTTAAAAAGCTGCTGAAAAGAAATGCTGCTTCTCGTCTGGGAGCTGGTCCTGGGGACGCTGGAGAAGTTCAAG 1110
Query 1043 CTCATCCATTCTTTAGACACATTAACTGGGAAGAACTTCTGGCTCGAAAGGTGGAGCCCCCCTTTAAACCTCTG 1116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CTCATCCATTCTTTAGACACATTAACTGGGAAGAACTTCTGGCTCGAAAGGTGGAGCCCCCCTTTAAACCTCTG 1184
Query 1117 TTGCAATCTGAAGAGGATGTAAGTCAGTTTGATTCCAAGTTTACACGTCAGACACCTGTCGACAGCCCAGATGA 1190
|
Sbjct 1185 T------------------------------------------------------------------------- 1185
Query 1191 CTCAACTCTCAGTGAAAGTGCCAATCAGGTCTTTCTGGGTTTTACATATGTGGCTCCATCTGTACTTGAAAGTG 1264
|||||||||||||||||||||||||||||||||||||||
Sbjct 1186 -----------------------------------TGGGTTTTACATATGTGGCTCCATCTGTACTTGAAAGTG 1224
Query 1265 TGAAAGAAAAGTTTTCCTTTGAACCAAAAATCCGATCACCTCGAAGATTTATTGGCAGCCCACGAACACCTGTC 1338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1225 TGAAAGAAAAGTTTTCCTTTGAACCAAAAATCCGATCACCTCGAAGATTTATTGGCAGCCCACGAACACCTGTC 1298
Query 1339 AG------------TACTGCT-----------------ATGTGC------------------------------ 1353
|| |.||.|| |.||||
Sbjct 1299 AGCCCAGTCAAATTTTCTCCTGGGGATTTCTGGGGAAGAGGTGCTTCGGCCAGCACAGCAAATCCTCAGACACC 1372
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 1373 TGTGGAATACCCAATGGAAACAAGTGGCATAGAGCAGATGGATGTGACAATGAGTGGGGAAGCATCGGCACCAC 1446
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 1447 TTCCAATACGACAGCCGAACTCTGGGCCATACAAAAAACAAGCTTTTCCCATGATCTCCAAACGGCCAGAGCAC 1520
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 1521 CTGCGTATGAATCTATGACAGAGCAATGCTTTTAATGAATTTAAGGCAAAAAAGGTGGAGAGGGAGATGTGTGA 1594
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 1595 GCATCCTGCAAGGTGAAACGACTCAAAATGACAGTTTCAGAGAGTCAATGTCATTACATAGAACACTTCAGACA 1668
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 1669 CAGGAAAAATAAACGTGGATTTTAAAAAATCAATCAATGGTGCAAAAAAAAACTTAAAGCAAAATAGTATTGCT 1742
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 1743 GAACTCTTAGGCACATCAATTAATTGATTCCTCGCGACATCTTCTCAACCTTATCAAGGATTTTCATGTTGATG 1816
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 1817 ACTCGAAACTGACAGTATTAAGGGTAGGATGTTGCTTCTGAATCACTGTTGAGTTCTGATTGTGTTGAAGAAGG 1890
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 1891 GTTATCCTTTCATTAGGCAAAGTACAAAATTGCCTATAATACTTGCAACTAAGGACAAATTAGCATGCAAGCTT 1964
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 1965 GGTCAAACTTTTTCCAGCAAAATGGAAGCAAAGACAAAAGAAACTTACCAATTGATGTTTTACGTGCAAACAAC 2038
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 2039 CTGAATCTTTTTTTTATATAAATATATATTTTTCAAATAGATTTTTGATTCAGCTCATTATGAAAAACATCCCA 2112
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 2113 AACTTTAAAATGCGAAATTATTGGTTGGTGTGAAGAAAGCCAGACAACTTCTGTTTCTTCTCTTGGTGAAATAA 2186
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 2187 TAAAATGCAAATGAATCATTGTTAACCACAGCTGTGGCTCGTTTGAGGGATTGGGGTGGACCTGGGGTTTATTT 2260
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 2261 TCAGTAACCCAGCTGCAATACCTGTCTGTAATATGAGAAAAAAAAAATGAATCTATTTAATCATTTCTACTTGC 2334
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 2335 AGTACTGCTATGTGCTAAGCTTAACTGGAAGCCTTGGAATGGGCATAAGTTGTATGTCCTACATTTCATCATTG 2408
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 2409 TCCCGGGCCTGCATTGCACTGGAAAAAAAAATCGCCACCTGTTCTTACACCAGTATTTGGTTCAAGACACCAAA 2482
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 2483 TGTCTTCAGCCCATGGCTGAAGAACAACAGAAGAGAGTCAGGATAAAAAATACATACTGTGGTCGGCAAGGTGA 2556
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 2557 GGGAGATAGGGATATCCAGGGGAAGAGGGTGTTGCTGTGGCCCACTCTCTGTCTAATCTCTTTACAGCAAATTG 2630
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 2631 GTAAGATTTTCAGTTTTACTTCTTTCTACTGTTTCTGCTGTCTACCTTCCTTATATTTTTTTCCTCAACAGTTT 2704
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 2705 TAAAAAGAAAAAAAGGTCTATTTTTTTTTCTCCTATACTTGGGCTACATTTTTTGATTGTAAAAATATTTGATG 2778
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 2779 GCCTTTTGATGAATGTCTTCCACAGTAAAGAAAACTTAGTGGCTTAATTTAGGAAACATGTTAACAGGACACTA 2852
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 2853 TGTTTTTGAAATTGTAACAAAATCTACATAAATGATTTACAGGTTAAAAGAATAAAAATAAAGGTAACTTTACC 2926
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 2927 TTTCTTAAATATTTCCTGCCTTAAAGAGAGCATTTCCATGACTTTAGCTGGTGAAAGGGTTTAATATCTGCAGA 3000
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3001 GCTTTATAAAAATATATTTCAGTGCATACTGGTATAATAGATGATCATGCAGTTGCAGTTGAGTTGTATCACCT 3074
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3075 TTTTTGTTTGTCTTTTATAATGTCTTCAGTCTGAGTGTGCAAAGTCAATTTGTAATATTTTGCAACCCTAGGAT 3148
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3149 TTTTTTAAATAGATGCTGCTTGCTATGTTTTCAAACCTTTTTGAGCCATAGGATCCAAGCCATAAAATTCTTTA 3222
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3223 TGCATGTTGAATTCAGTCAGAAAAGAGCAAGGCTTTGCTTTTTGAAATTGCAACTCAAATGAGATGGGATGAAA 3296
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3297 TCCTATGACAGTAAGCAAAAACAGAACCATGAAAAATGATTGGACATACACCTTTTCAATTGTGGCAATAATTG 3370
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3371 AAAGAATCGATAAAAGTTCATCTTTGGACAGAAAGCCTTTAAAAAAAAAATCACTCCCTCTTCCCCCTCCTCCC 3444
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3445 TTATTGCAGCAGCCTACTGAGAACTTTGACTGTTGCTGGTAAATTAGAAGCTACAATAATAATTAAGGGCAGAA 3518
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3519 ATTATACTTAAAAAGTGCAGATCCTTGTTCTTTGACAATTTGTGATGTCTGAAAAAACAGAACCCGAAAAGCTA 3592
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3593 TGGTGATATGTACAGGCATTATTTCAGACTGTAAATGGCTTGTGATACTCTTGATACTTGTTTTCAAATATGTT 3666
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3667 TACTAACTGTAGTGTTGACTGCCTGACCAAATTCCAGTGAAACTTATACACCAAAATATTCTTCCTAGGTCCTA 3740
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3741 TTTGCTAGTAACATGAGCACTGTGATTGGCTGGCTATAACCACCCCAGTTAAACCATTTTCATAATTAGTAGTG 3814
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3815 CCAGCAATAGTGGCAAACACTGCAACTTTTCTGCATAAAAAGCATTAATTGCACAGCTACCATCCACACAAATA 3888
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3889 CATAGTTTTTCTGACTTCACATTTATTAAGTGAAATTTATTTCCCATGCTGTGGAAAGTTTATTGAGAACTTGT 3962
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 3963 TTCATAAATGGATATCCCTACTATGACTGTGAAAACATGTCAAGTGTCACATTAGTGTCACAGACAGAAAGCAC 4036
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 4037 ACACCTATGCAATATGGCTTATCTATATTTATTTGTAAAAATCCAAGCATAGTTTAAAATATGATGTCGATATT 4110
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 4111 ACTAGTCTTGAGTTTCTAAGAGGGTTCTTTATGTTATACCAGGTAAGTGTATAAAAGAGATTAAGTGCTTTTTT 4184
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 4185 TTCATCACTTGATTATTTTCTTTAAAATCAGCTATTACAGGATATTTTTTTATTTTATACATGCTGTTTTTTAA 4258
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 4259 TTAAAATATAATCACTGAAGTTTACTAATTTGATTTTATAAGGTTTGTAGCATTACAGAATAACTAAACTGGGA 4332
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 4333 TTTATAAACCAGCTGTGATTAACAATGTAAAGTATTAATTATTGAACTTTGAACCAGATTTTTAGGAAAATTAT 4406
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 4407 GTTCTTTTTCCCCCTTTATGGTCTTAACTAATTTGAATCCTTCAAGAAGGATTTTTCCATACTATTTTTTAAGA 4480
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 4481 TAGAAGATAATTTGTGGGCAGGGGTGGAGGATGCATGTATGATACTCCATAAATTCAACATTCTTTACTATAGG 4554
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 4555 TAATGAATGATTATAAACAAGATGCATCTTAGATAGTATTAATATACTGAGCCTTGGATTATATATTTAATATA 4628
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 4629 GGACCTATTTTGAATATTCAGTTAATCATATGGTTCCTAGCTTACAAGGGCTAGATCTAAGATTATTCCCATGA 4702
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 4703 GAAATGTTGAATTTATGAAGAATAGATTTTAAGGCTTTGAAAATGGTTAATTTCTCAAAAACATCAATGTCCAA 4776
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 4777 ACATCTACCTTTTTTCATAGGAGTAGACACTAGCAAGCTGGACAAACTATCACAAAAGTATTTGTCACACATAA 4850
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 4851 CCTGTGGTCTGTTGCTGATTAATACAGTACTTTTTCTTGTGTGATTCTTAACATTATAGCACAAGTATTATCTC 4924
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 4925 AGTGGATTATCCGGAATAACATCTGAAAGATGGGTTCATCTATGTTTGTGTTTGCTCTTTAAACTATTGTTTCT 4998
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 4999 CCTATCCCAAGTTCGCTTTGCATCTATCAGTAAATAAAATTCTTCAGCTGCCTTATTAGGAGTGCTATGAGGGT 5072
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 5073 AACACCTGTTCTGCTTTTCATCTTGTATTTAGTTGACTGTATTATTTGATTTCGGATTGAATGAATGTAAATAG 5146
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 5147 AAATTAAATGCAAATTTGAATGAACATAAATAGAAGTGATTTATTTTTTTATTATCTTAAAGATAGGAAGGAAT 5220
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 5221 TAGTATACGTATCAGGTGTATAAATGGTTTAAATTTATTTTAACATGTCAGATGTGTTCAAGTTGTCATATAAA 5294
Query 1354 ------------------------------ 1353
Sbjct 5295 TAAACTATGTATGTAAGGAATGGGTTAAAA 5324
