Nucleotide Global Alignment

Description

Query:
TRCN0000481320
Subject:
NM_001353156.1
Aligned Length:
2499
Identities:
1928
Gaps:
558

Alignment

Query    1  ATGCAGAAGACTAGAAACACCGTAAATACATCTCTAGTAGGTAAACAGAAGCCTCACAAAAAACACATCACAGC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TGAAAACATGAAGAGCAGTTTGGTGTGTCTAACACAAGACCAACTACAACAGATTTTGATGACTGTAAACCAAG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  GAAATAGATCTCTTTCCCTGACTGAGAATGGAAAGGAGGCAAAAAGTCAATATAGTCTATATTTAAACAGTATT  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  TCTAATCAGCCAAAGGATGAGAACATTATGGGATTATTCAAAAAAACTGAAATGGTTTCATCTGTCCCAGCTGA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  AAATAAATCTGTCTTAAATGAACATCAGGAGACATCTAAACAGTGTGAGCAAAAAATTGCCATAGAGAATGAAT  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  GGAAACCAGCTGATATATTCAGTACTCTGGGGGAAAGGGAATGTGATAGAAGTTCGTTGGAAGCAAAAAAAGCC  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  CAGTGGAGGAAAGAGCTAGATGAACAGGTTGCTTTAAAGAAGAAAGAAAAAGAAGTTTCTGAAAAATGGAATGA  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  TCCTTGGAAAAAATCTGAAAGTGATAAAATAATATGGGAAAAACATCAAATT----CTTGAC-CAATCTAG-GG  586
                                             |||||..|..|| |||.||    ||.|.| .|.|.||| ||
Sbjct    1  ---------------------------------ATGGGGCATTCA-CAACTTAGAGCTAGTCAGACTTTAGAGG  40

Query  587  AAACAGTACTGCTGGAGCACCCTTTCAGTGCTGTGAAACAAGAACTGCAGAGAAAATGGATTGAAGAGTTGAAT  660
            |||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct   41  AAACAGTACTGCTGGAGCACCCTTTCAGTGCTGTGAAACAAGAACTGCAAAGAAAATGGATTGAAGAGTTGAAT  114

Query  661  AAGCAAATAGAAGATGACCGTCAAAGAAAAATAGAGGAAAAAATTATATATTCAAAGGGTGAGGAACATGACAG  734
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  115  AAGCAAATAGAAGATGACCGTCAAAGAAAAATAGAGGAAAAAATTATATATTCAAAGGGTGAGGAACATGACAG  188

Query  735  ATGGGCAATGCACTTTGATTCATTAAAGAGTTATCCTGGTTCTCAATCTCAGCTGTTCTCTCGGTCAACACACA  808
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct  189  ATGGGCAATGCACTTTGATTCATTAAAGAGTTATCCTGGTTCTCAATCTCAGCTGTTCTCTCAGTCAACACACA  262

Query  809  AACAACCTGAGTACTTCTGTGTCTCTCCTGACACTCAGGAGCTGGCTGATGTCAGCAGTGTTTGTACACCTACA  882
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  263  AACAACCTGAGTACTTCTGTGTCTCTCCTGACACTCAGGAGCTGGCTGATGTCAGCAGTGTTTGTACACCTACA  336

Query  883  ACCGGAAGCCAGGTTGAACCTTCAGAGGAGGAGCATATAGCAAAACCTATTAAGGATGTGGTTATGGCAAACAG  956
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  337  ACCGGAAGCCAGGTTGAACCTTCAGAGGAGGAGCATATAGCAAAACCTATTAAGGATGTGGTTATGGCAAACAG  410

Query  957  TAAGAAAACAAACTTTCTCCGTTCTATGACTGCTCTCTTGGACCCAGCTCAGATTGAGGAACGAGACAGACAAC  1030
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct  411  TAAGAAAACAAACTTTCTCCGTTCTATGACTGCTCTCTTGGACCCAGCTCAGATTGAGGAACGAGACAGACGAC  484

Query 1031  GACAAAAACAATTAGAGCATCAGAAAGCCATCACTGCCCAGGTAGAAGAGAAGCGCAGGAAGAAACAACTGGAG  1104
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  485  GACAAAAACAATTAGAGCATCAGAAAGCCATCACTGCCCAGGTAGAAGAGAAGCGCAGGAAGAAACAACTGGAG  558

Query 1105  GAAGAGCAAAGAAAGAAGGAAGAACAAGAAGAGGAGCTTCGCTTAGCACAGGAACGTGAAGAGATGCAGAAACA  1178
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  559  GAAGAGCAAAGAAAGAAGGAAGAACAAGAAGAGGAGCTTCGCTTAGCACAGGAACGTGAAGAGATGCAGAAACA  632

Query 1179  GTATGAAGAAGACATACTTAAGCAAAAACAAAAGGAAGAAATCATGACTCTCAAGACAAATGAGCTATTCCAGA  1252
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  633  GTATGAAGAAGACATACTTAAGCAAAAACAAAAGGAAGAAATCATGACTCTCAAGACAAATGAGCTATTCCAGA  706

Query 1253  CAATGCAGCGAGCACAGGAACTGGCACAGAGACTAAAACAAGAACAAAGAATCCGAGAATTGGCGCAAAAGGGA  1326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  707  CAATGCAGCGAGCACAGGAACTGGCACAGAGACTAAAACAAGAACAAAGAATCCGAGAATTGGCGCAAAAGGGA  780

Query 1327  CATGACACTTCTAGACTGATTAAAAATCTTGGTGTTGATACAATACAAATGGAATATAATGCATCTAACATTTC  1400
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  781  CATGACACTTCTAGACTGATTAAAAATCTTGGTGTTGATACAATACAAATGGAATATAATGCATCTAACATTTC  854

Query 1401  AAATTCAAGACATGATTCTGATGAAATCAGTGGTAAAATGAATACATATATGAATTCTACGACTTCTAAGAAGG  1474
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  855  AAATTCAAGACATGATTCTGATGAAATCAGTGGTAAAATGAATACATATATGAATTCTACGACTTCTAAGAAGG  928

Query 1475  ATACTGGTGTGCAAACAGATGACTTAAATATAGGAATATTCACCAATGCAGAATCACATTGTGGATCATTAATG  1548
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  929  ATACTGGTGTGCAAACAGATGACTTAAATATAGGAATATTCACCAATGCAGAATCACATTGTGGATCATTAATG  1002

Query 1549  GAGAGGGACATCACAAATTGTTCATCTCCTGAGATTTCGGCAGAACTTATTGGACAGTTTAGCACCAAGAAAAA  1622
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1003  GAGAGGGACATCACAAATTGTTCATCTCCTGAGATTTCGGCAGAACTTATTGGACAGTTTAGCACCAAGAAAAA  1076

Query 1623  CAAGCAAGAACTAACTCAGGATAAAGGAGCCAGCTTAGAAAAAGAAAACAATCGGTGTAATGACCAGTGTAATC  1696
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1077  CAAGCAAGAACTAACTCAGGATAAAGGAGCCAGCTTAGAAAAAGAAAACAATCGGTGTAATGACCAGTGTAATC  1150

Query 1697  AGTTCACAAGAATAGAGAAACAAACAAAACACATGAAGAAATATCCTAAAAGGCCTGATTGGAATATAAATAAG  1770
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1151  AGTTCACAAGAATAGAGAAACAAACAAAACACATGAAGAAATATCCTAAAAGGCCTGATTGGAATATAAATAAG  1224

Query 1771  CCACCTAAAAGGTATATTCCAGCATCAGAAAAGTACCCTAAACAGCTTCAAAAGCAGAGAGAAGAAAAAAAAGT  1844
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1225  CCACCTAAAAGGTATATTCCAGCATCAGAAAAGTACCCTAAACAGCTTCAAAAGCAGAGAGAAGAAAAAAAAGT  1298

Query 1845  AAGGAGGCAGATGGAATTGCTTCATTTGGTAGAAAAAAATAATCCTGGGCACCTCTCTCAAAACAGAGGCATTT  1918
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1299  AAGGAGGCAGATGGAATTGCTTCATTTGGTAGAAAAAAATAATCCTGGGCACCTCTCTCAAAACAGAGGCATTT  1372

Query 1919  CACCAGAAATTTTTCATTCATCTCATCAAGAAACGGAGTCAAAGTTGAGGTGGCATCTAGTCAAAAAGGAAGAA  1992
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1373  CACCAGAAATTTTTCATTCATCTCATCAAGAAACGGAGTCAAAGTTGAGGTGGCATCTAGTCAAAAAGGAAGAA  1446

Query 1993  GAGCCTCTGAATATTCATTCATTCAGCAAGGAAAGGTCTCCATCATCACCAGTTCCAGTAGTGAAAAACAGAAC  2066
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1447  GAGCCTCTGAATATTCATTCATTCAGCAAGGAAAGGTCTCCATCATCACCAGTTCCAGTAGTGAAAAACAGAAC  1520

Query 2067  CCAACAAACTCAAAATACATTACATTTACCACTAAAAAACAGTAGCTATGAGAGAGAGAATTTGATCTCAGGAA  2140
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1521  CCAACAAACTCAAAATACATTACATTTACCACTAAAAAACAGTAGCTATGAGAGAGAGAATTTGATCTCAGGAA  1594

Query 2141  GTAATCAAACAGAATTATCATCTGGGATTTCTGAATCATCCCATTTTATTCCGTATGTTCGAACAAATGAGATC  2214
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1595  GTAATCAAACAGAATTATCATCTGGGATTTCTGAATCATCCCATTTTATTCCGTATGTTCGAACAAATGAGATC  1668

Query 2215  TATTACCTTGATCCCGATGCACCATTGTCTGGGCCTTCAACCCAGGACCCTCAGTACCAAAATTCACAAGACTG  2288
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1669  TATTACCTTGATCCCGATGCACCATTGTCTGGGCCTTCAACCCAGGACCCTCAGTACCAAAATTCACAAGACTG  1742

Query 2289  TGGCCAAAAACGACAGCTATTTGATTCTGACTGTGTCAGGGATCCACTTCTTAATCCTAACATGGTGAAAAATA  2362
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1743  TGGCCAAAAACGACAGCTATTTGATTCTGACTGTGTCAGGGATCCACTTCTTAATCCTAACATGGTGAAAAATA  1816

Query 2363  GGGATCGACAGCAAGCAATCCTTAAGGGACTTTCAGAACTGAGACAGGGCCTTCTCCAGAAGCAAAAGGAGTTG  2436
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1817  GGGATCGACAGCAAGCAATCCTTAAGGGACTTTCAGAACTGAGACAGGGCCTTCTCCAGAAGCAAAAGGAGTTG  1890

Query 2437  GAAAGTAGTCTCCTGCCTTTAGCTGAAAATCAAGAAGAGAGTTTTGGTTCTTCATTT  2493
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1891  GAAAGTAGTCTCCTGCCTTTAGCTGAAAATCAAGAAGAGAGTTTTGGTTCTTCATTT  1947

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