Nucleotide Global Alignment

Description

Query:
TRCN0000481320
Subject:
NM_001353160.1
Aligned Length:
2493
Identities:
1750
Gaps:
741

Alignment

Query    1  ATGCAGAAGACTAGAAACACCGTAAATACATCTCTAGTAGGTAAACAGAAGCCTCACAAAAAACACATCACAGC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TGAAAACATGAAGAGCAGTTTGGTGTGTCTAACACAAGACCAACTACAACAGATTTTGATGACTGTAAACCAAG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  GAAATAGATCTCTTTCCCTGACTGAGAATGGAAAGGAGGCAAAAAGTCAATATAGTCTATATTTAAACAGTATT  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  TCTAATCAGCCAAAGGATGAGAACATTATGGGATTATTCAAAAAAACTGAAATGGTTTCATCTGTCCCAGCTGA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  AAATAAATCTGTCTTAAATGAACATCAGGAGACATCTAAACAGTGTGAGCAAAAAATTGCCATAGAGAATGAAT  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  GGAAACCAGCTGATATATTCAGTACTCTGGGGGAAAGGGAATGTGATAGAAGTTCGTTGGAAGCAAAAAAAGCC  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  CAGTGGAGGAAAGAGCTAGATGAACAGGTTGCTTTAAAGAAGAAAGAAAAAGAAGTTTCTGAAAAATGGAATGA  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  TCCTTGGAAAAAATCTGAAAGTGATAAAATAATATGGGAAAAACATCAAATTCTTGACCAATCTAGGGAAACAG  592
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  593  TACTGCTGGAGCACCCTTTCAGTGCTGTGAAACAAGAACTGCAGAGAAAATGGATTGAAGAGTTGAATAAGCAA  666
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  667  ATAGAAGATGACCGTCAAAGAAAAATAGAGGAAAAAATTATATATTCAAAGGGTGAGGAACATGACAGATGGGC  740
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  741  AATGCACTTTGATTCATTAAAGAGTTATCCTGGTTCTCAATCTCAGCTGTTCTCTCGGTCAACACACAAACAAC  814
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct    1  -ATGCACTTTGATTCATTAAAGAGTTATCCTGGTTCTCAATCTCAGCTGTTCTCTCAGTCAACACACAAACAAC  73

Query  815  CTGAGTACTTCTGTGTCTCTCCTGACACTCAGGAGCTGGCTGATGTCAGCAGTGTTTGTACACCTACAACCGGA  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   74  CTGAGTACTTCTGTGTCTCTCCTGACACTCAGGAGCTGGCTGATGTCAGCAGTGTTTGTACACCTACAACCGGA  147

Query  889  AGCCAGGTTGAACCTTCAGAGGAGGAGCATATAGCAAAACCTATTAAGGATGTGGTTATGGCAAACAGTAAGAA  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  148  AGCCAGGTTGAACCTTCAGAGGAGGAGCATATAGCAAAACCTATTAAGGATGTGGTTATGGCAAACAGTAAGAA  221

Query  963  AACAAACTTTCTCCGTTCTATGACTGCTCTCTTGGACCCAGCTCAGATTGAGGAACGAGACAGACAACGACAAA  1036
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct  222  AACAAACTTTCTCCGTTCTATGACTGCTCTCTTGGACCCAGCTCAGATTGAGGAACGAGACAGACGACGACAAA  295

Query 1037  AACAATTAGAGCATCAGAAAGCCATCACTGCCCAGGTAGAAGAGAAGCGCAGGAAGAAACAACTGGAGGAAGAG  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  296  AACAATTAGAGCATCAGAAAGCCATCACTGCCCAGGTAGAAGAGAAGCGCAGGAAGAAACAACTGGAGGAAGAG  369

Query 1111  CAAAGAAAGAAGGAAGAACAAGAAGAGGAGCTTCGCTTAGCACAGGAACGTGAAGAGATGCAGAAACAGTATGA  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  370  CAAAGAAAGAAGGAAGAACAAGAAGAGGAGCTTCGCTTAGCACAGGAACGTGAAGAGATGCAGAAACAGTATGA  443

Query 1185  AGAAGACATACTTAAGCAAAAACAAAAGGAAGAAATCATGACTCTCAAGACAAATGAGCTATTCCAGACAATGC  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  444  AGAAGACATACTTAAGCAAAAACAAAAGGAAGAAATCATGACTCTCAAGACAAATGAGCTATTCCAGACAATGC  517

Query 1259  AGCGAGCACAGGAACTGGCACAGAGACTAAAACAAGAACAAAGAATCCGAGAATTGGCGCAAAAGGGACATGAC  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  518  AGCGAGCACAGGAACTGGCACAGAGACTAAAACAAGAACAAAGAATCCGAGAATTGGCGCAAAAGGGACATGAC  591

Query 1333  ACTTCTAGACTGATTAAAAATCTTGGTGTTGATACAATACAAATGGAATATAATGCATCTAACATTTCAAATTC  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  592  ACTTCTAGACTGATTAAAAATCTTGGTGTTGATACAATACAAATGGAATATAATGCATCTAACATTTCAAATTC  665

Query 1407  AAGACATGATTCTGATGAAATCAGTGGTAAAATGAATACATATATGAATTCTACGACTTCTAAGAAGGATACTG  1480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  666  AAGACATGATTCTGATGAAATCAGTGGTAAAATGAATACATATATGAATTCTACGACTTCTAAGAAGGATACTG  739

Query 1481  GTGTGCAAACAGATGACTTAAATATAGGAATATTCACCAATGCAGAATCACATTGTGGATCATTAATGGAGAGG  1554
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  740  GTGTGCAAACAGATGACTTAAATATAGGAATATTCACCAATGCAGAATCACATTGTGGATCATTAATGGAGAGG  813

Query 1555  GACATCACAAATTGTTCATCTCCTGAGATTTCGGCAGAACTTATTGGACAGTTTAGCACCAAGAAAAACAAGCA  1628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  814  GACATCACAAATTGTTCATCTCCTGAGATTTCGGCAGAACTTATTGGACAGTTTAGCACCAAGAAAAACAAGCA  887

Query 1629  AGAACTAACTCAGGATAAAGGAGCCAGCTTAGAAAAAGAAAACAATCGGTGTAATGACCAGTGTAATCAGTTCA  1702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  888  AGAACTAACTCAGGATAAAGGAGCCAGCTTAGAAAAAGAAAACAATCGGTGTAATGACCAGTGTAATCAGTTCA  961

Query 1703  CAAGAATAGAGAAACAAACAAAACACATGAAGAAATATCCTAAAAGGCCTGATTGGAATATAAATAAGCCACCT  1776
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  962  CAAGAATAGAGAAACAAACAAAACACATGAAGAAATATCCTAAAAGGCCTGATTGGAATATAAATAAGCCACCT  1035

Query 1777  AAAAGGTATATTCCAGCATCAGAAAAGTACCCTAAACAGCTTCAAAAGCAGAGAGAAGAAAAAAAAGTAAGGAG  1850
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1036  AAAAGGTATATTCCAGCATCAGAAAAGTACCCTAAACAGCTTCAAAAGCAGAGAGAAGAAAAAAAAGTAAGGAG  1109

Query 1851  GCAGATGGAATTGCTTCATTTGGTAGAAAAAAATAATCCTGGGCACCTCTCTCAAAACAGAGGCATTTCACCAG  1924
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1110  GCAGATGGAATTGCTTCATTTGGTAGAAAAAAATAATCCTGGGCACCTCTCTCAAAACAGAGGCATTTCACCAG  1183

Query 1925  AAATTTTTCATTCATCTCATCAAGAAACGGAGTCAAAGTTGAGGTGGCATCTAGTCAAAAAGGAAGAAGAGCCT  1998
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1184  AAATTTTTCATTCATCTCATCAAGAAACGGAGTCAAAGTTGAGGTGGCATCTAGTCAAAAAGGAAGAAGAGCCT  1257

Query 1999  CTGAATATTCATTCATTCAGCAAGGAAAGGTCTCCATCATCACCAGTTCCAGTAGTGAAAAACAGAACCCAACA  2072
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1258  CTGAATATTCATTCATTCAGCAAGGAAAGGTCTCCATCATCACCAGTTCCAGTAGTGAAAAACAGAACCCAACA  1331

Query 2073  AACTCAAAATACATTACATTTACCACTAAAAAACAGTAGCTATGAGAGAGAGAATTTGATCTCAGGAAGTAATC  2146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1332  AACTCAAAATACATTACATTTACCACTAAAAAACAGTAGCTATGAGAGAGAGAATTTGATCTCAGGAAGTAATC  1405

Query 2147  AAACAGAATTATCATCTGGGATTTCTGAATCATCCCATTTTATTCCGTATGTTCGAACAAATGAGATCTATTAC  2220
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1406  AAACAGAATTATCATCTGGGATTTCTGAATCATCCCATTTTATTCCGTATGTTCGAACAAATGAGATCTATTAC  1479

Query 2221  CTTGATCCCGATGCACCATTGTCTGGGCCTTCAACCCAGGACCCTCAGTACCAAAATTCACAAGACTGTGGCCA  2294
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1480  CTTGATCCCGATGCACCATTGTCTGGGCCTTCAACCCAGGACCCTCAGTACCAAAATTCACAAGACTGTGGCCA  1553

Query 2295  AAAACGACAGCTATTTGATTCTGACTGTGTCAGGGATCCACTTCTTAATCCTAACATGGTGAAAAATAGGGATC  2368
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1554  AAAACGACAGCTATTTGATTCTGACTGTGTCAGGGATCCACTTCTTAATCCTAACATGGTGAAAAATAGGGATC  1627

Query 2369  GACAGCAAGCAATCCTTAAGGGACTTTCAGAACTGAGACAGGGCCTTCTCCAGAAGCAAAAGGAGTTGGAAAGT  2442
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1628  GACAGCAAGCAATCCTTAAGGGACTTTCAGAACTGAGACAGGGCCTTCTCCAGAAGCAAAAGGAGTTGGAAAGT  1701

Query 2443  AGTCTCCTGCCTTTAGCTGAAAATCAAGAAGAGAGTTTTGGTTCTTCATTT  2493
            |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1702  AGTCTCCTGCCTTTAGCTGAAAATCAAGAAGAGAGTTTTGGTTCTTCATTT  1752

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