Nucleotide Global Alignment

Description

Query:
TRCN0000481320
Subject:
XM_011533617.2
Aligned Length:
2760
Identities:
2490
Gaps:
267

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGGAAATAAGGCCAAGATTGCAAAATGTCCTTTAAGAACAAAAACTGGGCACATTCTAAAATCAACACAAGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TACTTGTATTGGGAGTGAAAAACTTTTGCAAAAGAAGCCAGTTGGTTCAGAAACATCACAGGCAAAAGGTGAAA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AAAATGGAATGACTTTTTCATCCACTAAGGATTTATGTAAACAATGTATAGATAAAGACTGTCTTCATATCCAG  222

Query    1  ---------------------------ATGCAGAAGACTAGAAACACCGTAAATACATCTCTAGTAGGTAAACA  47
                                       |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  AAAGAGATTTCACCTGCAACCCCTAATATGCAGAAGACTAGAAACACCGTAAATACATCTCTAGTAGGTAAACA  296

Query   48  GAAGCCTCACAAAAAACACATCACAGCTGAAAACATGAAGAGCAGTTTGGTGTGTCTAACACAAGACCAACTAC  121
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GAAGCCTCACAAAAAACACATCACAGCTGAAAACATGAAGAGCAGTTTGGTGTGTCTAACACAAGACCAACTAC  370

Query  122  AACAGATTTTGATGACTGTAAACCAAGGAAATAGATCTCTTTCCCTGACTGAGAATGGAAAGGAGGCAAAAAGT  195
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AACAGATTTTGATGACTGTAAACCAAGGAAATAGATCTCTTTCCCTGACTGAGAATGGAAAGGAGGCAAAAAGT  444

Query  196  CAATATAGTCTATATTTAAACAGTATTTCTAATCAGCCAAAGGATGAGAACATTATGGGATTATTCAAAAAAAC  269
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CAATATAGTCTATATTTAAACAGTATTTCTAATCAGCCAAAGGATGAGAACATTATGGGATTATTCAAAAAAAC  518

Query  270  TGAAATGGTTTCATCTGTCCCAGCTGAAAATAAATCTGTCTTAAATGAACATCAGGAGACATCTAAACAGTGTG  343
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TGAAATGGTTTCATCTGTCCCAGCTGAAAATAAATCTGTCTTAAATGAACATCAGGAGACATCTAAACAGTGTG  592

Query  344  AGCAAAAAATTGCCATAGAGAATGAATGGAAACCAGCTGATATATTCAGTACTCTGGGGGAAAGGGAATGTGAT  417
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  AGCAAAAAATTGCCATAGAGAATGAATGGAAACCAGCTGATATATTCAGTACTCTGGGGGAAAGGGAATGTGAT  666

Query  418  AGAAGTTCGTTGGAAGCAAAAAAAGCCCAGTGGAGGAAAGAGCTAGATGAACAGGTTGCTTTAAAGAAGAAAGA  491
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AGAAGTTCGTTGGAAGCAAAAAAAGCCCAGTGGAGGAAAGAGCTAGATGAACAGGTTGCTTTAAAGAAGAAAGA  740

Query  492  AAAAGAAGTTTCTGAAAAATGGAATGATCCTTGGAAAAAATCTGAAAGTGATAAAATAATATGGGAAAAACATC  565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AAAAGAAGTTTCTGAAAAATGGAATGATCCTTGGAAAAAATCTGAAAGTGATAAAATAATATGGGAAAAACATC  814

Query  566  AAATTCTTGACCAATCTAGGGAAACAGTACTGCTGGAGCACCCTTTCAGTGCTGTGAAACAAGAACTGCAGAGA  639
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||
Sbjct  815  AAATTCTTGACCAATCTAGGGAAACAGTACTGCTGGAGCACCCTTTCAGTGCTGTGAAACAAGAACTGCAAAGA  888

Query  640  AAATGGATTGAAGAGTTGAATAAGCAAATAGAAGATGACCGTCAAAGAAAAATAGAGGAAAAAATTATATATTC  713
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AAATGGATTGAAGAGTTGAATAAGCAAATAGAAGATGACCGTCAAAGAAAAATAGAGGAAAAAATTATATATTC  962

Query  714  AAAGGGTGAGGAACATGACAGATGGGCAATGCACTTTGATTCATTAAAGAGTTATCCTGGTTCTCAATCTCAGC  787
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  AAAGGGTGAGGAACATGACAGATGGGCAATGCACTTTGATTCATTAAAGAGTTATCCTGGTTCTCAATCTCAGC  1036

Query  788  TGTTCTCTCGGTCAACACACAAACAACCTGAGTACTTCTGTGTCTCTCCTGACACTCAGGAGCTGGCTGATGTC  861
            |||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  TGTTCTCTCAGTCAACACACAAACAACCTGAGTACTTCTGTGTCTCTCCTGACACTCAGGAGCTGGCTGATGTC  1110

Query  862  AGCAGTGTTTGTACACCTACAACCGGAAGCCAGGTTGAACCTTCAGAGGAGGAGCATATAGCAAAACCTATTAA  935
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  AGCAGTGTTTGTACACCTACAACCGGAAGCCAGGTTGAACCTTCAGAGGAGGAGCATATAGCAAAACCTATTAA  1184

Query  936  GGATGTGGTTATGGCAAACAGTAAGAAAACAAACTTTCTCCGTTCTATGACTGCTCTCTTGGACCCAGCTCAGA  1009
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  GGATGTGGTTATGGCAAACAGTAAGAAAACAAACTTTCTCCGTTCTATGACTGCTCTCTTGGACCCAGCTCAGA  1258

Query 1010  TTGAGGAACGAGACAGACAACGACAAAAACAATTAGAGCATCAGAAAGCCATCACTGCCCAGGTAGAAGAGAAG  1083
            ||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  TTGAGGAACGAGACAGACGACGACAAAAACAATTAGAGCATCAGAAAGCCATCACTGCCCAGGTAGAAGAGAAG  1332

Query 1084  CGCAGGAAGAAACAACTGGAGGAAGAGCAAAGAAAGAAGGAAGAACAAGAAGAGGAGCTTCGCTTAGCACAGGA  1157
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  CGCAGGAAGAAACAACTGGAGGAAGAGCAAAGAAAGAAGGAAGAACAAGAAGAGGAGCTTCGCTTAGCACAGGA  1406

Query 1158  ACGTGAAGAGATGCAGAAACAGTATGAAGAAGACATACTTAAGCAAAAACAAAAGGAAGAAATCATGACTCTCA  1231
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  ACGTGAAGAGATGCAGAAACAGTATGAAGAAGACATACTTAAGCAAAAACAAAAGGAAGAAATCATGACTCTCA  1480

Query 1232  AGACAAATGAGCTATTCCAGACAATGCAGCGAGCACAGGAACTGGCACAGAGACTAAAACAAGAACAAAGAATC  1305
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  AGACAAATGAGCTATTCCAGACAATGCAGCGAGCACAGGAACTGGCACAGAGACTAAAACAAGAACAAAGAATC  1554

Query 1306  CGAGAATTGGCGCAAAAGGGACATGACACTTCTAGACTGATTAAAAATCTTGGT------------------GT  1361
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||                  ||
Sbjct 1555  CGAGAATTGGCGCAAAAGGGACATGACACTTCTAGACTGATTAAAAATCTTGGTGGTGATTTCTCTTTGCCAGT  1628

Query 1362  TGATACAATACAAATGGAATATAATGCATCTAACATTTCAAATTCAAGACATGATTCTGATGAAATCAGTGGTA  1435
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  TGATACAATACAAATGGAATATAATGCATCTAACATTTCAAATTCAAGACATGATTCTGATGAAATCAGTGGTA  1702

Query 1436  AAATGAATACATATATGAATTCTACGACTTCTAAGAAGGATACTGGTGTGCAAACAGATGACTTAAATATAGGA  1509
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  AAATGAATACATATATGAATTCTACGACTTCTAAGAAGGATACTGGTGTGCAAACAGATGACTTAAATATAGGA  1776

Query 1510  ATATTCACCAATGCAGAATCACATTGTGGATCATTAATGGAGAGGGACATCACAAATTGTTCATCTCCTGAGAT  1583
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  ATATTCACCAATGCAGAATCACATTGTGGATCATTAATGGAGAGGGACATCACAAATTGTTCATCTCCTGAGAT  1850

Query 1584  TTCGGCAGAACTTATTGGACAGTTTAGCACCAAGAAAAACAAGCAAGAACTAACTCAGGATAAAGGAGCCAGCT  1657
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  TTCGGCAGAACTTATTGGACAGTTTAGCACCAAGAAAAACAAGCAAGAACTAACTCAGGATAAAGGAGCCAGCT  1924

Query 1658  TAGAAAAAGAAAACAATCGGTGTAATGACCAGTGTAATCAGTTCACAAGAATAGAGAAACAAACAAAACACATG  1731
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  TAGAAAAAGAAAACAATCGGTGTAATGACCAGTGTAATCAGTTCACAAGAATAGAGAAACAAACAAAACACATG  1998

Query 1732  AAGAAATATCCTAAAAGGCCTGATTGGAATATAAATAAGCCACCTAAAAGGTATATTCCAGCATCAGAAAAGTA  1805
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  AAGAAATATCCTAAAAGGCCTGATTGGAATATAAATAAGCCACCTAAAAGGTATATTCCAGCATCAGAAAAGTA  2072

Query 1806  CCCTAAACAGCTTCAAAAGCAGAGAGAAGAAAAAAAAGTAAGGAGGCAGATGGAATTGCTTCATTTGGTAGAAA  1879
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073  CCCTAAACAGCTTCAAAAGCAGAGAGAAGAAAAAAAAGTAAGGAGGCAGATGGAATTGCTTCATTTGGTAGAAA  2146

Query 1880  AAAATAATCCTGGGCACCTCTCTCAAAACAGAGGCATTTCACCAGAAATTTTTCATTCATCTCATCAAGAAACG  1953
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147  AAAATAATCCTGGGCACCTCTCTCAAAACAGAGGCATTTCACCAGAAATTTTTCATTCATCTCATCAAGAAACG  2220

Query 1954  GAGTCAAAGTTGAGGTGGCATCTAGTCAAAAAGGAAGAAGAGCCTCTGAATATTCATTCATTCAGCAAGGAAAG  2027
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221  GAGTCAAAGTTGAGGTGGCATCTAGTCAAAAAGGAAGAAGAGCCTCTGAATATTCATTCATTCAGCAAGGAAAG  2294

Query 2028  GTCTCCATCATCACCAGTTCCAGTAGTGAAAAACAGAACCCAACAAACTCAAAATACATTACATTTACCACTAA  2101
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295  GTCTCCATCATCACCAGTTCCAGTAGTGAAAAACAGAACCCAACAAACTCAAAATACATTACATTTACCACTAA  2368

Query 2102  AAAACAGTAGCTATGAGAGAGAGAATTTGATCTCAGGAAGTAATCAAACAGAATTATCATCTGGGATTTCTGAA  2175
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369  AAAACAGTAGCTATGAGAGAGAGAATTTGATCTCAGGAAGTAATCAAACAGAATTATCATCTGGGATTTCTGAA  2442

Query 2176  TCATCCCATTTTATTCCGTATGTTCGAACAAATGAGATCTATTACCTTGATCCCGATGCACCATTGTCTGGGCC  2249
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443  TCATCCCATTTTATTCCGTATGTTCGAACAAATGAGATCTATTACCTTGATCCCGATGCACCATTGTCTGGGCC  2516

Query 2250  TTCAACCCAGGACCCTCAGTACCAAAATTCACAAGACTGTGGCCAAAAACGACAGCTATTTGATTCTGACTGTG  2323
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517  TTCAACCCAGGACCCTCAGTACCAAAATTCACAAGACTGTGGCCAAAAACGACAGCTATTTGATTCTGACTGTG  2590

Query 2324  TCAGGGATCCACTTCTTAATCCTAACATGGTGAAAAATAGGGATCGACAGCAAGCAATCCTTAAGGGACTTTCA  2397
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591  TCAGGGATCCACTTCTTAATCCTAACATGGTGAAAAATAGGGATCGACAGCAAGCAATCCTTAAGGGACTTTCA  2664

Query 2398  GAACTGAGACAGGGCCTTCTCCAGAAGCAAAAGGAGTTGGAAAGTAGTCTCCTGCCTTTAGCTGAAAATCAAGA  2471
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665  GAACTGAGACAGGGCCTTCTCCAGAAGCAAAAGGAGTTGGAAAGTAGTCTCCTGCCTTTAGCTGAAAATCAAGA  2738

Query 2472  AGAGAGTTTTGGTTCTTCATTT  2493
            ||||||||||||||||||||||
Sbjct 2739  AGAGAGTTTTGGTTCTTCATTT  2760

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