Nucleotide Global Alignment

Description

Query:
TRCN0000481320
Subject:
XR_001740115.2
Aligned Length:
3257
Identities:
2469
Gaps:
785

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTAGCGCTTGCTGAGCGGCGGCGGCAACCGACGTACACAAGGGGCTTGAGCGTTCTGTGGAGAGAGTGCGAGGT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CAGGCCATGAACTTGGGAGATGGTTTAAAGCTTGAAACTGAATTACTGGATGGAAAAACCAAGCTAATATTGTC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TCCATATGAACATAAATCAAAAATTTCTGTGAAGATGGGAAATAAGGCCAAGATTGCAAAATGTCCTTTAAGAA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CAAAAACTGGGCACATTCTAAAATCAACACAAGATACTTGTATTGGGAGTGAAAAACTTTTGCAAAAGAAGCCA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GTTGGTTCAGAAACATCACAGGCAAAAGGTGAAAAAAATGGAATGACTTTTTCATCCACTAAGGATTTATGTAA  370

Query    1  -------------------------------------------------------------ATGCAGAAGACTA  13
                                                                         |||||||||||||
Sbjct  371  ACAATGTATAGATAAAGACTGTCTTCATATCCAGAAAGAGATTTCACCTGCAACCCCTAATATGCAGAAGACTA  444

Query   14  GAAACACCGTAAATACATCTCTAGTAGGTAAACAGAAGCCTCACAAAAAACACATCACAGCTGAAAACATGAAG  87
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GAAACACCGTAAATACATCTCTAGTAGGTAAACAGAAGCCTCACAAAAAACACATCACAGCTGAAAACATGAAG  518

Query   88  AGCAGTTTGGTGTGTCTAACACAAGACCAACTACAACAGATTTTGATGACTGTAAACCAAGGAAATAGATCTCT  161
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AGCAGTTTGGTGTGTCTAACACAAGACCAACTACAACAGATTTTGATGACTGTAAACCAAGGAAATAGATCTCT  592

Query  162  TTCCCTGACTGAGAATGGAAAGGAGGCAAAAAGTCAATATAGTCTATATTTAAACAGTATTTCTAATCAGCCAA  235
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TTCCCTGACTGAGAATGGAAAGGAGGCAAAAAGTCAATATAGTCTATATTTAAACAGTATTTCTAATCAGCCAA  666

Query  236  AGGATGAGAACATTATGGGATTATTCAAAAAAACTGAAATGGTTTCATCTGTCCCAGCTGAAAATAAATCTGTC  309
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AGGATGAGAACATTATGGGATTATTCAAAAAAACTGAAATGGTTTCATCTGTCCCAGCTGAAAATAAATCTGTC  740

Query  310  TTAAATGAACATCAGGAGACATCTAAACAGTGTGAGCAAAAAATTGCCATAGAGAATGAATGGAAACCAGCTGA  383
            |||||||||||||||||||||||||||||                     ||||||||||||||||||||||||
Sbjct  741  TTAAATGAACATCAGGAGACATCTAAACA---------------------AGAGAATGAATGGAAACCAGCTGA  793

Query  384  TATATTCAGTACTCTGGGGGAAAGGGAATGTGATAGAAGTTCGTTGGAAGCAAAAAAAGCCCAGTGGAGGAAAG  457
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  794  TATATTCAGTACTCTGGGGGAAAGGGAATGTGATAGAAGTTCGTTGGAAGCAAAAAAAGCCCAGTGGAGGAAAG  867

Query  458  AGCTAGATGAACAGGTTGCTTTAAAGAAGAAAGAAAAAGAAGTTTCTGAAAAATGGAATGATCCTTGGAAAAAA  531
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  868  AGCTAGATGAACAGGTTGCTTTAAAGAAGAAAGAAAAAGAAGTTTCTGAAAAATGGAATGATCCTTGGAAAAAA  941

Query  532  TCTGAAAGTGATAAAATAATATGGGAAAAACATCAAATTCTTGACCAATCTAGGGAAACAGTACTGCTGGAGCA  605
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  942  TCTGAAAGTGATAAAATAATATGGGAAAAACATCAAATTCTTGACCAATCTAGGGAAACAGTACTGCTGGAGCA  1015

Query  606  CCCTTTCAGTGCTGTGAAACAAGAACTGCAGAGAAAATGGATTGAAGAGTTGAATAAGCAAATAGAAGATGACC  679
            ||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 1016  CCCTTTCAGTGCTGTGAAACAAGAACTGCAAAGAAAATGGATTGAAGAGTTGAATAAGCAAATAGAAGATGACC  1089

Query  680  GTCAAAGAAAAATAGAGGAAAAAATTATATATTCAAAGGGTGAGGAACATGACAGATGGGCAATGCACTTTGAT  753
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1090  GTCAAAGAAAAATAGAGGAAAAAATTATATATTCAAAGGGTGAGGAACATGACAGATGGGCAATGCACTTTGAT  1163

Query  754  TCATTAAAGAGTTATCCTGGTTCTCAATCTCAGCTGTTCTCTCGGTCAACACACAAACAACCTGAGTACTTCTG  827
            |||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||
Sbjct 1164  TCATTAAAGAGTTATCCTGGTTCTCAATCTCAGCTGTTCTCTCAGTCAACACACAAACAACCTGAGTACTTCTG  1237

Query  828  TGTCTCTCCTGACACTCAGGAGCTGGCTGATGTCAGCAGTGTTTGTACACCTACAACCGGAAGCCAGGTTGAAC  901
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1238  TGTCTCTCCTGACACTCAGGAGCTGGCTGATGTCAGCAGTGTTTGTACACCTACAACCGGAAGCCAGGTTGAAC  1311

Query  902  CTTCAGAGGAGGAGCATATAGCAAAACCTATTAAGGATGTGGTTATGGCAAACAGTAAGAAAACAAACTTTCTC  975
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1312  CTTCAGAGGAGGAGCATATAGCAAAACCTATTAAGGATGTGGTTATGGCAAACAGTAAGAAAACAAACTTTCTC  1385

Query  976  CGTTCTATGACTGCTCTCTTGGACCCAGCTCAGATTGAGGAACGAGACAGACAACGACAAAAACAATTAGAGCA  1049
            ||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||
Sbjct 1386  CGTTCTATGACTGCTCTCTTGGACCCAGCTCAGATTGAGGAACGAGACAGACGACGACAAAAACAATTAGAGCA  1459

Query 1050  T-------------------------------------------------------------------------  1050
            |                                                                         
Sbjct 1460  TCAGCTCTGTCACCTAGGCTGGACTTCAGTGGCACAATGTTGGATCACTACAACCTCCACCTTCTGGGTTCAAG  1533

Query 1051  --------------------------------------CAGAAAGCCATCACTGCCCAGGTAGAAGAGAAGCGC  1086
                                                  ||||||||||||||||||||||||||||||||||||
Sbjct 1534  CAATTCCCATGCCTCAGCCACCCAAGTAGCTGGAATTACAGAAAGCCATCACTGCCCAGGTAGAAGAGAAGCGC  1607

Query 1087  AGGAAGAAACAACTGGAGGAAGAGCAAAGAAAGAAGGAAGAACAAGAAGAGGAGCTTCGCTTAGCACAGGAACG  1160
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1608  AGGAAGAAACAACTGGAGGAAGAGCAAAGAAAGAAGGAAGAACAAGAAGAGGAGCTTCGCTTAGCACAGGAACG  1681

Query 1161  TGAAGAGATGCAGAAACAGTATGAAGAAGACATACTTAAGCAAAAACAAAAGGAAGAAATCATGACTCTCAAGA  1234
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1682  TGAAGAGATGCAGAAACAGTATGAAGAAGACATACTTAAGCAAAAACAAAAGGAAGAAATCATGACTCTCAAGA  1755

Query 1235  CAAATGAGCTATTCCAGACAATGCAGCGAGCACAGGAACTGGCACAGAGACTAAAACAAGAACAAAGAATCCGA  1308
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1756  CAAATGAGCTATTCCAGACAATGCAGCGAGCACAGGAACTGGCACAGAGACTAAAACAAGAACAAAGAATCCGA  1829

Query 1309  GAATTGGCGCAAAAGGGACATGACACTTCTAGACTGATTAAAAATCTTGGTGTTGATACAATACAAATGGAATA  1382
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1830  GAATTGGCGCAAAAGGGACATGACACTTCTAGACTGATTAAAAATCTTGGTGTTGATACAATACAAATGGAATA  1903

Query 1383  TAATGCATCTAACATTTCAAATTCAAGACATGATTCTGATGAAATCAGTGGTAAAATGAATACATATATGAATT  1456
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1904  TAATGCATCTAACATTTCAAATTCAAGACATGATTCTGATGAAATCAGTGGTAAAATGAATACATATATGAATT  1977

Query 1457  CTACGACTTCTAAGAAGGATACTGGTGTGCAAACAGATGACTTAAATATAGGAATATTCACCAATGCAGAATCA  1530
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1978  CTACGACTTCTAAGAAGGATACTGGTGTGCAAACAGATGACTTAAATATAGGAATATTCACCAATGCAGAATCA  2051

Query 1531  CATTGTGGATCATTAATGGAGAGGGACATCACAAATTGTTCATCTCCTGAGATTTCGGCAGAACTTATTGGACA  1604
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2052  CATTGTGGATCATTAATGGAGAGGGACATCACAAATTGTTCATCTCCTGAGATTTCGGCAGAACTTATTGGACA  2125

Query 1605  GTTTAGCACCAAGAAAAACAAGCAAGAACTAACTCAGGATAAAGGAGCCAGCTTAGAAAAAGAAAACAATCGGT  1678
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2126  GTTTAGCACCAAGAAAAACAAGCAAGAACTAACTCAGGATAAAGGAGCCAGCTTAGAAAAAGAAAACAATCGGT  2199

Query 1679  GTAATGACCAGTGTAATCAGTTCACAAGAATAGAGAAACAAACAAAACACATGAAGAAATATCCTAAAAGGCCT  1752
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2200  GTAATGACCAGTGTAATCAGTTCACAAGAATAGAGAAACAAACAAAACACATGAAGAAATATCCTAAAAGGCCT  2273

Query 1753  GATTGGAATATAAATAAGCCACCTAAAAGGTATATTCCAGCATCAGAAAAGTACCCTAAACAGCTTCAAAAGCA  1826
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2274  GATTGGAATATAAATAAGCCACCTAAAAGGTATATTCCAGCATCAGAAAAGTACCCTAAACAGCTTCAAAAGCA  2347

Query 1827  GAGAGAAGAAAAAAAAGTAAGGAGGCAGATGGAATTGCTTCATTTGGTAGAAAAAAATAATCCTGGGCACCTCT  1900
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2348  GAGAGAAGAAAAAAAAGTAAGGAGGCAGATGGAATTGCTTCATTTGGTAGAAAAAAATAATCCTGGGCACCTCT  2421

Query 1901  CTCAAAACAGAGGCATTTCACCAGAAATTTTTCATTCATCTCATCAAGAAACGGAGTCAAAGTTGAGGTGGCAT  1974
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2422  CTCAAAACAGAGGCATTTCACCAGAAATTTTTCATTCATCTCATCAAGAAACGGAGTCAAAGTTGAGGTGGCAT  2495

Query 1975  CTAGTCAAAAAGGAAGAAGAGCCTCTGAATATTCATTCATTCAGCAAGGAAAGGTCTCCATCATCACCAGTTCC  2048
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2496  CTAGTCAAAAAGGAAGAAGAGCCTCTGAATATTCATTCATTCAGCAAGGAAAGGTCTCCATCATCACCAGTTCC  2569

Query 2049  AGTAGTGAAAAACAGAACCCAACAAACTCAAAATACATTACATTTACCACTAAAAAACAGTAGCTATGAGAGAG  2122
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2570  AGTAGTGAAAAACAGAACCCAACAAACTCAAAATACATTACATTTACCACTAAAAAACAGTAGCTATGAGAGAG  2643

Query 2123  AGAATTTGATCTCAGGAAGTAATCAAACAGAATTATCATCTGGGATTTCTGAATCATCCCATTTTATTCCGTAT  2196
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2644  AGAATTTGATCTCAGGAAGTAATCAAACAGAATTATCATCTGGGATTTCTGAATCATCCCATTTTATTCCGTAT  2717

Query 2197  GTTCGAACAAATGAGATCTATTACCTTGATCCCGATGCACCATTGTCTGGGCCTTCAACCCAGGACCCTCAGTA  2270
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2718  GTTCGAACAAATGAGATCTATTACCTTGATCCCGATGCACCATTGTCTGGGCCTTCAACCCAGGACCCTCAGTA  2791

Query 2271  CCAAAATTCACAAGACTGTGGCCAAAAACGACAGCTATTTGATTCTGACTGTGTCAGGGATCCACTTCTTAATC  2344
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2792  CCAAAATTCACAAGACTGTGGCCAAAAACGACAGCTATTTGATTCTGACTGTGTCAGGGATCCACTTCTTAATC  2865

Query 2345  CTAACATGGTGAAAAATAGGGATCGACAGCAAGCAATCCTTAAGGGACTTTCAGAACTGAGACAGGGCCTTCTC  2418
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2866  CTAACATGGTGAAAAATAGGGATCGACAGCAAGCAATCCTTAAGGGACTTTCAGAACTGAGACAGGGCCTTCTC  2939

Query 2419  CAGAAGCAAAAGGAGTTGGAAAGTAGTCTCCTGCCTTTAGCTGAAAATCAAGAAGAGAGTTTTGGTTCTTCATT  2492
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2940  CAGAAGCAAAAGGAGTTGGAAAGTAGTCTCCTGCCTTTAGCTGAAAATCAAGAAGAGAGTTTTGGTTCTTCATT  3013

Query 2493  T-------------------------------------------------------------------------  2493
            |                                                                         
Sbjct 3014  TTAAATGTAGAAAATCAAATCCTTCACATTTGATTTGTGTCTTCCAAATTATAAAATGTGCTCACTGGCTCAAC  3087

Query 2494  --------------------------------------------------------------------------  2493
                                                                                      
Sbjct 3088  TGTATTTTTCAAATAGCCTAGATTTACTTATTTTTTTAAATGCTCATTAAAAACTTGTATACTATGTAGTAAAA  3161

Query 2494  --------------------------------------------------------------------------  2493
                                                                                      
Sbjct 3162  TGCTGTACTTGTTCTATACAATAAAACAGATACTTCTTTTGTAAAAGCTTAGTAGTAAAAAAAAAAAAAAAAAA  3235

Query 2494  -  2493
             
Sbjct 3236  A  3236

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