Nucleotide Global Alignment

Description

Query:
TRCN0000481375
Subject:
XR_001751204.2
Aligned Length:
4149
Identities:
1373
Gaps:
2775

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AAAACGGCTCCTGTCACAGAAGTCTCGTGATTGCTCTGGGAGCTTTGCTTAGACACTTGAAACTACAGGAGAAA  74

Query    1  -----------------ATGGCTACAGAGAGCCCTGCTACGCGTCGGGTCCAGGTGGCAGAACATCCTAGGTTA  57
                             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GAAGGATCTAGCGAAATATGGCTACAGAGAGCCCTGCTACGCGTCGGGTCCAGGTGGCAGAACATCCTAGGTTA  148

Query   58  CTGAAGCTAAAGGAGATGTTTAACTCCAAGTTTGGATCTATTCCCAAGTTTTATGTTCGAGCACCAGGAAGAGT  131
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CTGAAGCTAAAGGAGATGTTTAACTCCAAGTTTGGATCTATTCCCAAGTTTTATGTTCGAGCACCAGGAAGAGT  222

Query  132  CAACATAATAGGAGAGCATATAGATTATTGTGGATATTCTGTTCTTCCTATGGCTGTAGAACAAGATGTGCTAA  205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CAACATAATAGGAGAGCATATAGATTATTGTGGATATTCTGTTCTTCCTATGGCTGTAGAACAAGATGTGCTAA  296

Query  206  TAGCTGTAGAACCTGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCGGACTTCAGTACT  279
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TAGCTGTAGAACCTGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCGGACTTCAGTACT  370

Query  280  AGTGCTAATAACATCCAGATTGATAAAACCAAGCCTTTGTGGCACAACTATTTCTTATGTGGACTTAAAGGAAT  353
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AGTGCTAATAACATCCAGATTGATAAAACCAAGCCTTTGTGGCACAACTATTTCTTATGTGGACTTAAAGGAAT  444

Query  354  TCAGGAACACTTTGGTCTTAGTAACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTG  427
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TCAGGAACACTTTGGTCTTAGTAACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTG  518

Query  428  GCCTCTCCAGCTCCAGTGCTTTGGTCTGTTGTGCTGGCTTGGTGACGCTCACAGTGCTGGGAAGGAATCTATCC  501
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GCCTCTCCAGCTCCAGTGCTTTGGTCTGTTGTGCTGGCTTGGTGACGCTCACAGTGCTGGGAAGGAATCTATCC  592

Query  502  AAGGTGGAACTTGCAGAAATCTGTGCCAAGAGTGAGCGTTACATTGGCACTGAAGGAGGAGGCATGGACCAGTC  575
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  AAGGTGGAACTTGCAGAAATCTGTGCCAAGAGTGAGCGTTACATTGGCACTGAAGGAGGAGGCATGGACCAGTC  666

Query  576  TATATCATTTCTTGCAGAAGAAGGAACTGCCAAGTTGATAGAATTTAGTCCTCTGAGGGCAACCGATGTAAAAC  649
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TATATCATTTCTTGCAGAAGAAGGAACTGCCAAGTTGATAGAATTTAGTCCTCTGAGGGCAACCGATGTAAAAC  740

Query  650  TCCCAAGTGGAGCAGTGTTTGTGATTGCCAACAGTTGTGTGGAGATGAATAAGGCAGCAACTTCCCATTTCAAT  723
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TCCCAAGTGGAGCAGTGTTTGTGATTGCCAACAGTTGTGTGGAGATGAATAAGGCAGCAACTTCCCATTTCAAT  814

Query  724  ATCAGGGTGATGGAGTGTCGGCTGGCTGCGAAGCTCCTGGCTAAATACAAAAGCTTGCAATGGGACAAAGTACT  797
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  ATCAGGGTGATGGAGTGTCGGCTGGCTGCGAAGCTCCTGGCTAAATACAAAAGCTTGCAATGGGACAAAGTACT  888

Query  798  GAGGCTGGAGGAGGTGCAGGCTAAACTAGGGATTAGTCTAGAAGAAATGCTGTTGGTCACAGAAGATGCCCTTC  871
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GAGGCTGGAGGAGGTGCAGGCTAAACTAGGGATTAGTCTAGAAGAAATGCTGTTGGTCACAGAAGATGCCCTTC  962

Query  872  ATCCTGAACCCTATAACCCTGAGGAGATCTGCAGGTGTCTGGGAATTAGCCTGGAGGAACTCCGAACCCAAATC  945
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  ATCCTGAACCCTATAACCCTGAGGAGATCTGCAGGTGTCTGGGAATTAGCCTGGAGGAACTCCGAACCCAAATC  1036

Query  946  CTGAGTCCAAACACTCAAG-------------------------------------------------------  964
            |||||||||||||||||||                                                       
Sbjct 1037  CTGAGTCCAAACACTCAAGATGGCCTGGGAATTTTCATAAATTTTCCAAAATTTTCCCAGACCCACCACACCAG  1110

Query  965  ---------------------------ATGTGCTCATCTTCAAACTCTATCAGCGGGCAAAGCATGTGTACAGC  1011
                                       |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  CTCAGCAACTGTTCAGCATGGGTGAAAATGTGCTCATCTTCAAACTCTATCAGCGGGCAAAGCATGTGTACAGC  1184

Query 1012  GAGGCTGCGCGAGTGCTCCAGTTTAAGAAGATATGTGAAGAAGCACCTGAAAACATGGTCCAGCTGCTGGGAGA  1085
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  GAGGCTGCGCGAGTGCTCCAGTTTAAGAAGATATGTGAAGAAGCACCTGAAAACATGGTCCAGCTGCTGGGAGA  1258

Query 1086  GTTGATGAACCAGAGCCACATGAGCTGCCGGGACATGTATGAGTGCAGCTGCCCCGAGCTGGATCAGCTGGTGG  1159
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  GTTGATGAACCAGAGCCACATGAGCTGCCGGGACATGTATGAGTGCAGCTGCCCCGAGCTGGATCAGCTGGTGG  1332

Query 1160  ACATCTGTCGGAAGTTTGGGGCTCAAGGGTCACGACTTACTGGAGCAGGATGGGGAGGCTGTACAGTATCAATG  1233
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||
Sbjct 1333  ACATCTGTCGGAAGTTTGGGGCTCAAGGGTCACGACTTACTGGAGCAGGATGGGGAGGCTGCACAGTATCAATG  1406

Query 1234  GTACCTGCGGACAAGCTGCCCAGCTTTCTAGCAAATGTGCACAAAGCTTATTACCAGAGGAGTGATGGAAGCTT  1307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GTACCTGCGGACAAGCTGCCCAGCTTTCTAGCAAATGTGCACAAAGCTTATTACCAGAGGAGTGATGGAAGCTT  1480

Query 1308  AGCACCGGAGAAGCAAAGTTTGTTTGCTACCAAACCTGGAGGTGGGGCTTTGGTTTTGCTTGAGGCC-------  1374
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       
Sbjct 1481  AGCACCGGAGAAGCAAAGTTTGTTTGCTACCAAACCTGGAGGTGGGGCTTTGGTTTTGCTTGAGGCCTGAAAAA  1554

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 1555  ATGTAAAAAGTCTGAGAGAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATTAAT  1628

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 1629  CTTCCTTCTGTTTTGTATTATGATGAACGGTTGCTATTATATCAAGATATATTTTCAAAGAAATGGTTGAAAGC  1702

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 1703  TCTCTATGCTTCATAATGATTCTTTTTCCATCTTAAAATATGGTTTTACTATTAAGAGCCAAGATCATGCTTGG  1776

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 1777  ACAGATCTTTTAAGAATAACTTACTGAGATTTATTGATTTGAAGATTTTAAAGATGAATGGTAAAACACACTCT  1850

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 1851  TAATACTGATTACATGGATTGGACTTGAATTAAATATATTGTTACAATTAAACTGATACCACTGAATTGTATGC  1924

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 1925  ATTATTCTTGAATAGAGTTCATTTCTGGTTTCTCTTAGTATTCTTCTTCCTCAAAGTTGTAGTTGTCTGTTGAT  1998

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 1999  GATGGTGATGATGATGATGATGACGATAGTGATGCCACACATTCTCTCTCAATTTCAGCTTCGGAACGCTATGA  2072

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 2073  AAATAATACATGATTAAAGTTTCACAGATCTTCTTGGACATTGTATAATTGAATTTGAATGTGAGATTTCTCCA  2146

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 2147  GTTATCAAGAGACTAAGGATTTTTTTTTTTTTTTGACAAAAGGAGGATACAGGAAGAAAATTCAGACTCATTTG  2220

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 2221  AATATTTGTAAACCATGTAATATATAAATAACCACTTTCAATTCTTTTGGCCCTGAGCTATCTCCATTACTTAA  2294

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 2295  TAGAAAAACTTAGATAAAAAACACTTTAAGACTCTTCTATTCACATTGAAATAAAGAATTATCTAGATGATAAT  2368

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 2369  TCAGATAATTCAGTTTGTTCATAGAATTACTTTCTTATCACTCTTTTTCTACTACTTTTTCTCAAATACCTCTC  2442

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 2443  TAATCCAAGAGGCACTTCCAAGAAATTCCACACATTCCTTATATCCCTTTTTTGCTTGTCTAGCAAAGCTTGTT  2516

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 2517  TGTATATATGCACCCCATTGTAAAGCAGGTATGCAGGTATGTGGGTGAAAGTGACTATGAAAAGACTTAATGAA  2590

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 2591  TTCTGGGATTTGTAATGGTATTGATGGGTATCTCTGTATGTATATCAAGAGTGGGCAGAAATGTTTGGCTGGTG  2664

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 2665  ATGGCAAATGACTGGCTTTCTCTTGTGGATGGACTATAGGAAGCACTTTCTGAATTATGTAATGATTTGGACCA  2738

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 2739  AAAAGTATTTTGCTGAAATACTCAGGTAATTGAGATAGCAATGGTTTTATGGCATGAATTATCCAAAAAAATAT  2812

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 2813  CAGAATTACTTATTATTCTGTGATTTCATTAGCTCATTAATGTTTAACTCACAGATTGGGCATCACCATCTAGA  2886

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 2887  ATTTCAGTTTAAGGGAGGCCTGCGCAAAGCTAGTTTTATTTCTTAAAGGATAACAGTCATACATAGAATACTAG  2960

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 2961  GAAAGCCAATATTCTATTTAAAAATAAACTTCTGATGCATTTTCATTCTTAGCAGAAAGGTAAATGCTTGAGAA  3034

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 3035  AGCTTGAGTCAAATTTGTTAAAAGAATTTTGAGTTCTATAAATCCAAAAATCTGAAACCTGAATTTATTTAAAT  3108

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 3109  TTATAATCCTTTATTTTTTAATACCGTGCCATTTTCCACAAAGGATTTGTGGTTGGTATATAATTCTTTAAAGA  3182

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 3183  TACCTGGATCAGTGTAAAAAAAAAAAAAAAAAGGCACCTGTCATTGTTTTGCTGTTCCATTTACAATTTTCACC  3256

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 3257  AGGTGATTTCTTCTTCACAAAAGGTGAGTAAAAATTTCCAATGTGCACTCTTCTTTGGGGGACACACATGGTCA  3330

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 3331  TTCTAAGCGAGGGATCTATTCTATATTTGTTTTGATTTCTCTCGATAAAAAGAACTATGTTTCAGTCTTACTAT  3404

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 3405  CACTGTGTGGTATCTAGATATTATGAGAGATGCTAAACTTACCTGGAAGGGATAGGGCCGGGGCCATTAGAAAA  3478

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 3479  AAGATCATGCAGTAAATGGACTTTGAGCATGGCCCTAAAAGATGAGTAGAGTTTAAAAGCTGTGGAGTGCACAC  3552

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 3553  TGCAGATGAGCAAAGCCTATGGGTATAGGCAAACATGGTGTGTGTAGGAGGCTCAGTGAGAGTGAAGGCTTTGC  3626

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 3627  TTTGGTATGTAGTGAAGAATAAGATTGACTACACTGGCTGGAGCTAGCTTTTGAAGAGTCAAATCCAGGCAGCA  3700

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 3701  TTTAGATCAGGGGTTATAGCCCAGCAGCCCATGGGCCACATCTGGTCTGCAGATGTATATAGTTTGGCCCACAG  3774

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 3775  AATGACTAAAAACTTGGGCTCCAAATCAGGAGATTGTACAAGCAGTATCAGATATTCTGGATTACTCAGAATCT  3848

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 3849  GGATTACTGAGTGGTGGAATATCTGATACTACTTGTCCAACATTTCTACAGGGCATCAATGAACTAGGGCTGAG  3922

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 3923  ATAGTAGCTGCCTTGTTAGATGAGGCATGGCTATCCAGTGCGCTACAGTTTCCACAACTGCTTGTATAATAGTT  3996

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 3997  TCCCTGACACTCAAATCATTTACCACTTACCAGCTGAGGTCACTTGCCCTTTATCAGGACACTTGCACTGTTGT  4070

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 4071  TTTCCTATTCTAATTAGGTATTTCTCTGTGCCCATGTCCCTATCAATAGTAGGGAAGATAGACCAAAAAAAAAA  4144

Query 1375  -----  1374
                 
Sbjct 4145  AAAAA  4149

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