Nucleotide Global Alignment
Description
- Query:
- TRCN0000481445
- Subject:
- XM_017025911.1
- Aligned Length:
- 4446
- Identities:
- 2216
- Gaps:
- 2202
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGGGGACTTGGGACTTGCCTGGCGACTTTGGCCGGACTTTTGCTAACTGCGGCGGGCGAGACGTTCTCAGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGGCTGCCTCTTTGATGAGCCGTATAGCACATGTGGATATAGTCAATCTGAAGGTGATGACTTCAATTGGGAGC 148
Query 1 --------------------------------------ATGCCATCAGGTTCTTTCATGCTGGTGAATGCCTCT 36
||||||||||||||||||||||||||||||||||||
Sbjct 149 AAGTGAACACCTTGACTAAACCGACTTCTGATCCATGGATGCCATCAGGTTCTTTCATGCTGGTGAATGCCTCT 222
Query 37 GGGAGACCTGAGGGGCAGAGAGCCCACCTGCTCTTACCCCAACTTAAAGAAAATGACACCCACTGCATCGATTT 110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGGAGACCTGAGGGGCAGAGAGCCCACCTGCTCTTACCCCAACTTAAAGAAAATGACACCCACTGCATCGATTT 296
Query 111 TCACTATTTTGTGTCCAGCAAGAGTAATTCTCCTCCGGGGTTACTCAATGTCTACGTGAAGGTCAATAACGGGC 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TCACTATTTTGTGTCCAGCAAGAGTAATTCTCCTCCGGGGTTACTCAATGTCTACGTGAAGGTCAATAACGGGC 370
Query 185 CACTGGGGAATCCTATCTGGAATATATCTGGAGACCCAGCACGTACATGGAACAGGGCAGAACTGGCCATTAGT 258
||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||
Sbjct 371 CACTGGGGAATCCTATCTGGAATATATCTGGAGACCCAACACGTACATGGAACAGGGCAGAACTGGCCATTAGT 444
Query 259 ACTTTCTGGCCTAACTTTTATCAGGTGATTTTTGAAGTGATAACTTCTGGACATCAAGGCTATCTCGCTATCGA 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ACTTTCTGGCCTAACTTTTATCAGGTGATTTTTGAAGTGATAACTTCTGGACATCAAGGCTATCTCGCTATCGA 518
Query 333 TGAGGTGAAGGTGTTAGGACATCCATGTACCAGGACTCCTCACTTCCTGCGGATTCAGAATGTGGAAGTTAATG 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGAGGTGAAGGTGTTAGGACATCCATGTACCAGGACTCCTCACTTCCTGCGGATTCAGAATGTGGAAGTTAATG 592
Query 407 CTGGCCAGTTTGCTACCTTCCAGTGCAGTGCCATCGGCAGGACCGTGGCAGGAGACAGGCTCTGGTTACAGGGC 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CTGGCCAGTTTGCTACCTTCCAGTGCAGTGCCATCGGCAGGACCGTGGCAGGAGACAGGCTCTGGTTACAGGGC 666
Query 481 ATTGATGTGCGAGATGCTCCTCTGAAGGAAATCAAGGTGACCAGCTCCCGACGCTTCATTGCTTCATTTAATGT 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 ATTGATGTGCGAGATGCTCCTCTGAAGGAAATCAAGGTGACCAGCTCCCGACGCTTCATTGCTTCATTTAATGT 740
Query 555 TGTGAATACCACCAAACGAGATGCTGGAAAGTACCGCTGCATGATTCGCACTGAAGGAGGTGTTGGAATATCAA 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TGTGAATACCACCAAACGAGATGCTGGAAAGTACCGCTGCATGATTCGCACTGAAGGAGGTGTTGGAATATCAA 814
Query 629 ACTATGCAGAGTTGGTAGTTAAAGAACCACCCGTTCCTATTGCCCCACCTCAGCTCGCCTCTGTAGGAGCCACC 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ACTATGCAGAGTTGGTAGTTAAAGAACCACCCGTTCCTATTGCCCCACCTCAGCTCGCCTCTGTAGGAGCCACC 888
Query 703 TACCTGTGGATACAGCTCAACGCCAACTCCATCAATGGGGATGGGCCCATTGTGGCCCGAGAGGTGGAGTACTG 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TACCTGTGGATACAGCTCAACGCCAACTCCATCAATGGGGATGGGCCCATTGTGGCCCGAGAGGTGGAGTACTG 962
Query 777 CACGGCCAGTGGGAGCTGGAATGACCGGCAGCCAGTCGATTCCACGAGCTATAAAATTGGACACCTTGACCCAG 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CACGGCCAGTGGGAGCTGGAATGACCGGCAGCCAGTCGATTCCACGAGCTATAAAATTGGACACCTTGACCCAG 1036
Query 851 ATACAGAATATGAGATTAGTGTGCTCCTGACCAGGCCAGGGGAGGGTGGCACTGGCTCTCCTGGTCCGGCTCTC 924
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 1037 ATACAGAATATGAGATTAGTGTGCTCCTGACCAGGCCAGGGGAGGGTGGCACTGGCTCTCCTGGTCCAGCTCTC 1110
Query 925 AGGACAAGAACAAAGTGTGCTGATCCCATGCGAGGCCCAAGAAAACTAGAAGTAGTGGAGGTCAAATCTCGGCA 998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AGGACAAGAACAAAGTGTGCTGATCCCATGCGAGGCCCAAGAAAACTAGAAGTAGTGGAGGTCAAATCTCGGCA 1184
Query 999 AATCACTATCAGCTGGGAGCCATTTGGATATAATGTAACTCGTTGCCACAGTTATAATCTCACTGTCCACTACT 1072
||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AATCACTATCCGCTGGGAGCCATTTGGATATAATGTAACTCGTTGCCACAGTTATAATCTCACTGTCCACTACT 1258
Query 1073 GTTACCAAGTTGGAGGACAAGAACAAGTGCGAGAAGAAGTAAGCTGGGATACAGAAAACTCACACCCTCAACAC 1146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GTTACCAAGTTGGAGGACAAGAACAAGTGCGAGAAGAAGTAAGCTGGGATACAGAAAACTCACACCCTCAACAC 1332
Query 1147 ACGATCACTAACCTGTCACCATACACCAATGTCAGTGTGAAACTGATCCTCATGAACCCAGAGGGCCGGAAGGA 1220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 ACGATCACTAACCTGTCACCATACACCAATGTCAGTGTGAAACTGATCCTCATGAACCCAGAGGGCCGGAAGGA 1406
Query 1221 AAGCCAAGAACTCATAGTGCAGACAGATGAAGACCTCCCAGGTGCTGTTCCCACTGAATCCATACAAGGAAGTA 1294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 AAGCCAAGAACTCATAGTGCAGACAGATGAAGACCTCCCAGGTGCTGTTCCCACTGAATCCATACAAGGAAGTA 1480
Query 1295 CCTTTGAAGAGAAGATATTTCTTCAGTGGAGAGAACCAACTCAAACATATGGTGTAATCACTTTATATGAGATC 1368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CCTTTGAAGAGAAGATATTTCTTCAGTGGAGAGAACCAACTCAAACATATGGTGTAATCACTTTATATGAGATC 1554
Query 1369 ACCTACAAAGCAGTCAGTTCCTTTGACCCAGAAATAGATTTATCCAATCAGAGTGGAAGAGTTTCAAAGCTGGG 1442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 ACCTACAAAGCAGTCAGTTCCTTTGACCCAGAAATAGATTTATCCAATCAGAGTGGAAGAGTTTCAAAGCTGGG 1628
Query 1443 AAATGAAACCCATTTCCTGTTTTTTGGACTGTATCCGGGGACCACATACTCCTTTACCATCCGAGCTAGCACAG 1516
|||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 AAATGAAACCCATTTTCTGTTTTTTGGACTGTATCCGGGGACCACATACTCCTTTACCATCCGAGCTAGCACAG 1702
Query 1517 CTAAGGGTTTTGGGCCTCCAGCAACAAACCAGTTCACCACCAAAATATCAGCACCCTCTATGCCAGCTTATGAA 1590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 CTAAGGGTTTTGGGCCTCCAGCAACAAACCAGTTCACCACCAAAATATCAGCACCCTCTATGCCAGCTTATGAA 1776
Query 1591 CTTGAGACACCTTTGAATCAAACTGACAATACCGTGACAGTCATGCTGAAACCTGCCCACAGCAGAGGAGCACC 1664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 CTTGAGACACCTTTGAATCAAACTGACAATACCGTGACAGTCATGCTGAAACCTGCCCACAGCAGAGGAGCACC 1850
Query 1665 TGTCAGTGTCTATCAAATAGTTGTTGAGGAAGAACGTCCTCGAAGAACTAAAAAGACGACAGAAATCTTAAAGT 1738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 TGTCAGTGTCTATCAAATAGTTGTTGAGGAAGAACGTCCTCGAAGAACTAAAAAGACGACAGAAATCTTAAAGT 1924
Query 1739 GCTACCCAGTGCCAATTCACTTCCAGAATGCTTCTCTGCTGAACTCACAGTACTACTTTGCTGCAGAATTTCCT 1812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 GCTACCCAGTGCCAATTCACTTCCAGAATGCTTCTCTGCTGAACTCACAGTACTACTTTGCTGCAGAATTTCCT 1998
Query 1813 GCAGACAGCCTCCAAGCTGCGCAGCCTTTTACAATTGGTGATAATAAGACATATAATGGATACTGGAACACTCC 1886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 GCAGACAGCCTCCAAGCTGCGCAGCCTTTTACAATTGGTGATAATAAGACATATAATGGATACTGGAACACTCC 2072
Query 1887 CCTTCTCCCCTATAAAAGCTACAGAATTTATTTCCAAGCTGCTAGTAGAGCCAATGGGGAAACCAAAATAGACT 1960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 CCTTCTCCCCTATAAAAGCTACAGAATTTATTTCCAAGCTGCTAGTAGAGCCAATGGGGAAACCAAAATAGACT 2146
Query 1961 GTGTCCAAGTGGCCACAAA------------------------------------------------------- 1979
|||||||||||||||||||
Sbjct 2147 GTGTCCAAGTGGCCACAAAAGCTGCGATAATCGTGACTCAGCTTACAACACCTTACATTCGCATCGCCCCCGCT 2220
Query 1980 --------------------AGGAGCTGCCACTCCGAAACCAGTCCCAGAACCCGAGAAACAGACAGACCATAC 2033
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 GCAGGCGACGGCCAACTAACAGGAGCTGCCACTCCGAAACCAGTCCCAGAACCCGAGAAACAGACAGACCATAC 2294
Query 2034 AGTTAAAATTGCTGGAGTCATCGCGGGCATCTTGCTGTTCGTGATTATATTTCTTGGAGTTGTGTTGGTAATGA 2107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 AGTTAAAATTGCTGGAGTCATCGCGGGCATCTTGCTGTTCGTGATTATATTTCTTGGAGTTGTGTTGGTAATGA 2368
Query 2108 AGAAAAGGAAACTGGCCAAGAAGCGGAAAGAGACCATGAG---CAGCACCCGACAGGAGATGACTGTGATGGTG 2178
|||||||| ||...|||| |||| | ||||| .||||
Sbjct 2369 AGAAAAGG---CTTTACAAG--------------CATG-GTGCCAGCA--------------TCTGT------- 2403
Query 2179 AACTCAATGGACAAGAGC-TATGCTGAG----CAGGGCACAAACTGCGACGAGGCTTTCTCATTCATGGA---- 2243
|| ||| |.||.|||| ||| ||.|||| .||.|||||||
Sbjct 2404 ---TC----------AGCTTCTGGTGAGGCCTCAG---------------GAAGCTT--CCAATCATGGAGGAA 2447
Query 2244 ---CACGCACAATCTGAATGGGAGATCTGTGTCTTCACCATCGTCCTTCACAATGAAAACAAATACACTGAGCA 2314
.|.||||||.| |...||||| ||||.| ||| |||||
Sbjct 2448 GGCAAAGCACAAGC----------AGGCGTGTC----CCATGG-------CAA----------------GAGCA 2484
Query 2315 CATCGGTGCCTAATTCCTATTACCCAGATGAAACCCACACAATGGCCAGCGATACCAGCAGCCTGGTGCAGTCC 2388
||.| |||.|..||.|||| |.|| ||| |||.
Sbjct 2485 ----GGAG-----------------------------CACGAGAGCGAGCG------GGAG---GGT---GTCT 2513
Query 2389 CATACTTACAAGAAGCGAGAGCCGGCCGACGTGCCCTATCAGACTGGGCAGCTCCACCCCGCCATCCGGGTGGC 2462
||.||||
Sbjct 2514 CAGACTT------------------------------------------------------------------- 2520
Query 2463 AGACCTCCTTCAGCACATCACACAGATGAAGTGTGCGGAGGGCTACGGCTTCAAGGAGGAATACGAGAGCTTCT 2536
Sbjct 2521 -------------------------------------------------------------------------- 2520
Query 2537 TTGAAGGGCAGTCTGCACCATGGGACTCGGCTAAGAAAGGTGAGAACAGAATGAAGAACAGATACGGGAATATC 2610
Sbjct 2521 -------------------------------------------------------------------------- 2520
Query 2611 ATTGCATACGATCATTCCCGAGTGAGGCTGCAGACAATAGAAGGAGACACAAACTCAGACTATATCAATGGCAA 2684
Sbjct 2521 -------------------------------------------------------------------------- 2520
Query 2685 TTATATCGATGGTTATCATCGACCCAATCATTACATTGCTACCCAAGGGCCAATGCAGGAAACCATCTATGACT 2758
Sbjct 2521 -------------------------------------------------------------------------- 2520
Query 2759 TCTGGAGGATGGTGTGGCACGAAAACACTGCAAGTATCATCATGGTGACCAATCTTGTGGAAGTGGGAAGGGTC 2832
Sbjct 2521 -------------------------------------------------------------------------- 2520
Query 2833 AAATGCTGCAAATACTGGCCAGATGACACAGAGATATATAAAGACATTAAAGTTACCCTAATAGAAACAGAACT 2906
Sbjct 2521 -------------------------------------------------------------------------- 2520
Query 2907 ACTGGCAGAATATGTGATAAGAACATTTGCTGTTGAAAAGAGAGGTGTGCATGAAATCCGAGAGATCAGACAGT 2980
Sbjct 2521 -------------------------------------------------------------------------- 2520
Query 2981 TTCACTTCACTGGCTGGCCGGATCGTGGGGTCCCCTACCATGCCACCGGCCTGCTGGGATTCGTGCGGCAAGTC 3054
Sbjct 2521 -------------------------------------------------------------------------- 2520
Query 3055 AAGTCCAAGAGCCCGCCCAGTGCAGGCCCACTGGTGGTGCACTGCAGTGCTGGTGCAGGGAGGACTGGCTGTTT 3128
Sbjct 2521 -------------------------------------------------------------------------- 2520
Query 3129 CATCGTCATTGATATCATGTTGGACATGGCCGAAAGGGAAGGGGTCGTAGACATCTACAACTGCGTCAGGGAGC 3202
Sbjct 2521 -------------------------------------------------------------------------- 2520
Query 3203 TGCGGTCACGGAGGGTGAACATGGTGCAAACAGAGGAGCAGTATGTGTTTATCCACGATGCGATCCTGGAAGCC 3276
Sbjct 2521 -------------------------------------------------------------------------- 2520
Query 3277 TGTCTTTGTGGGGACACCTCTGTGCCTGCTTCCCAAGTTAGGTCTCTGTATTATGACATGAACAAACTGGATCC 3350
Sbjct 2521 -------------------------------------------------------------------------- 2520
Query 3351 ACAGACAAACTCAAGCCAGATTAAAGAGGAATTCCGGACGCTAAACATGGTGACACCAACGCTGCGAGTAGAGG 3424
Sbjct 2521 -------------------------------------------------------------------------- 2520
Query 3425 ACTGCAGCATCGCACTGTTGCCCCGGAACCATGAGAAAAACCGGTGCATGGACATCCTGCCCCCAGACCGCTGC 3498
Sbjct 2521 -------------------------------------------------------------------------- 2520
Query 3499 CTGCCCTTCCTCATCACCATCGATGGGGAGAGCAGCAACTACATCAATGCTGCCCTCATGGACAGCTATAAACA 3572
Sbjct 2521 -------------------------------------------------------------------------- 2520
Query 3573 GCCTTCAGCTTTTATAGTCACCCAGCATCCTTTGCCAAACACAGTGAAAGACTTTTGGAGACTGGTCCTGGATT 3646
Sbjct 2521 -------------------------------------------------------------------------- 2520
Query 3647 ATCACTGCACATCCGTAGTTATGCTAAATGATGTGGATCCTGCCCAGTTGTGTCCACAGTACTGGCCAGAAAAC 3720
Sbjct 2521 -------------------------------------------------------------------------- 2520
Query 3721 GGAGTACACAGACACGGCCCCATCCAGGTGGAATTTGTCTCTGCTGACCTGGAAGAGGACATCATCAGCAGGAT 3794
Sbjct 2521 -------------------------------------------------------------------------- 2520
Query 3795 ATTCCGCATTTACAATGCCGCCAGACCCCAAGATGGATATCGGATGGTGCAGCAATTCCAGTTCCTGGGCTGGC 3868
Sbjct 2521 -------------------------------------------------------------------------- 2520
Query 3869 CGATGTACAGGGACACACCAGTGTCTAAGCGCTCCTTCTTGAAGCTCATTCGCCAGGTGGACAAGTGGCAAGAG 3942
Sbjct 2521 -------------------------------------------------------------------------- 2520
Query 3943 GAATACAATGGCGGGGAAGGCCGCACCGTTGTGCACTGCTTGAACGGGGGAGGCCGCAGTGGGACGTTCTGCGC 4016
Sbjct 2521 -------------------------------------------------------------------------- 2520
Query 4017 CATCAGCATCGTATGTGAGATGCTCCGGCACCAGAGAACCGTGGATGTCTTTCACGCTGTGAAGACACTGAGGA 4090
Sbjct 2521 -------------------------------------------------------------------------- 2520
Query 4091 ACAACAAGCCCAACATGGTCGACCTCCTGGATCAGTACAAGTTCTGCTACGAGGTGGCCCTGGAATACTTGAAT 4164
Sbjct 2521 -------------------------------------------------------------------------- 2520
Query 4165 TCTGGC 4170
Sbjct 2521 ------ 2520
