Nucleotide Global Alignment

Description

• Query: TRCN0000481445
• Subject: XM_017025912.1
• Aligned Length: 4417
• Identities: 2122
• Gaps: 2285

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGTGGATGTGCTGGCTGGAGCCCCCTCCTGACAGTGACGATGAGGACTGTACCACAGGTGGCTGCCTCTTTGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGAGCCGTATAGCACATGTGGATATAGTCAATCTGAAGGTGATGACTTCAATTGGGAGCAAGTGAACACCTTGA  148

Query    1  -----------------------ATGCCATCAGGTTCTTTCATGCTGGTGAATGCCTCTGGGAGACCTGAGGGG  51
                                   |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CTAAACCGACTTCTGATCCATGGATGCCATCAGGTTCTTTCATGCTGGTGAATGCCTCTGGGAGACCTGAGGGG  222

Query   52  CAGAGAGCCCACCTGCTCTTACCCCAACTTAAAGAAAATGACACCCACTGCATCGATTTTCACTATTTTGTGTC  125
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CAGAGAGCCCACCTGCTCTTACCCCAACTTAAAGAAAATGACACCCACTGCATCGATTTTCACTATTTTGTGTC  296

Query  126  CAGCAAGAGTAATTCTCCTCCGGGGTTACTCAATGTCTACGTGAAGGTCAATAACGGGCCACTGGGGAATCCTA  199
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CAGCAAGAGTAATTCTCCTCCGGGGTTACTCAATGTCTACGTGAAGGTCAATAACGGGCCACTGGGGAATCCTA  370

Query  200  TCTGGAATATATCTGGAGACCCAGCACGTACATGGAACAGGGCAGAACTGGCCATTAGTACTTTCTGGCCTAAC  273
            |||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TCTGGAATATATCTGGAGACCCAACACGTACATGGAACAGGGCAGAACTGGCCATTAGTACTTTCTGGCCTAAC  444

Query  274  TTTTATCAGGTGATTTTTGAAGTGATAACTTCTGGACATCAAGGCTATCTCGCTATCGATGAGGTGAAGGTGTT  347
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TTTTATCAGGTGATTTTTGAAGTGATAACTTCTGGACATCAAGGCTATCTCGCTATCGATGAGGTGAAGGTGTT  518

Query  348  AGGACATCCATGTACCAGGACTCCTCACTTCCTGCGGATTCAGAATGTGGAAGTTAATGCTGGCCAGTTTGCTA  421
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AGGACATCCATGTACCAGGACTCCTCACTTCCTGCGGATTCAGAATGTGGAAGTTAATGCTGGCCAGTTTGCTA  592

Query  422  CCTTCCAGTGCAGTGCCATCGGCAGGACCGTGGCAGGAGACAGGCTCTGGTTACAGGGCATTGATGTGCGAGAT  495
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CCTTCCAGTGCAGTGCCATCGGCAGGACCGTGGCAGGAGACAGGCTCTGGTTACAGGGCATTGATGTGCGAGAT  666

Query  496  GCTCCTCTGAAGGAAATCAAGGTGACCAGCTCCCGACGCTTCATTGCTTCATTTAATGTTGTGAATACCACCAA  569
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GCTCCTCTGAAGGAAATCAAGGTGACCAGCTCCCGACGCTTCATTGCTTCATTTAATGTTGTGAATACCACCAA  740

Query  570  ACGAGATGCTGGAAAGTACCGCTGCATGATTCGCACTGAAGGAGGTGTTGGAATATCAAACTATGCAGAGTTGG  643
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  ACGAGATGCTGGAAAGTACCGCTGCATGATTCGCACTGAAGGAGGTGTTGGAATATCAAACTATGCAGAGTTGG  814

Query  644  TAGTTAAAGAACCACCCGTTCCTATTGCCCCACCTCAGCTCGCCTCTGTAGGAGCCACCTACCTGTGGATACAG  717
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TAGTTAAAGAACCACCCGTTCCTATTGCCCCACCTCAGCTCGCCTCTGTAGGAGCCACCTACCTGTGGATACAG  888

Query  718  CTCAACGCCAACTCCATCAATGGGGATGGGCCCATTGTGGCCCGAGAGGTGGAGTACTGCACGGCCAGTGGGAG  791
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CTCAACGCCAACTCCATCAATGGGGATGGGCCCATTGTGGCCCGAGAGGTGGAGTACTGCACGGCCAGTGGGAG  962

Query  792  CTGGAATGACCGGCAGCCAGTCGATTCCACGAGCTATAAAATTGGACACCTTGACCCAGATACAGAATATGAGA  865
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CTGGAATGACCGGCAGCCAGTCGATTCCACGAGCTATAAAATTGGACACCTTGACCCAGATACAGAATATGAGA  1036

Query  866  TTAGTGTGCTCCTGACCAGGCCAGGGGAGGGTGGCACTGGCTCTCCTGGTCCGGCTCTCAGGACAAGAACAAAG  939
            ||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||
Sbjct 1037  TTAGTGTGCTCCTGACCAGGCCAGGGGAGGGTGGCACTGGCTCTCCTGGTCCAGCTCTCAGGACAAGAACAAAG  1110

Query  940  TGTGCTGATCCCATGCGAGGCCCAAGAAAACTAGAAGTAGTGGAGGTCAAATCTCGGCAAATCACTATCAGCTG  1013
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct 1111  TGTGCTGATCCCATGCGAGGCCCAAGAAAACTAGAAGTAGTGGAGGTCAAATCTCGGCAAATCACTATCCGCTG  1184

Query 1014  GGAGCCATTTGGATATAATGTAACTCGTTGCCACAGTTATAATCTCACTGTCCACTACTGTTACCAAGTTGGAG  1087
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  GGAGCCATTTGGATATAATGTAACTCGTTGCCACAGTTATAATCTCACTGTCCACTACTGTTACCAAGTTGGAG  1258

Query 1088  GACAAGAACAAGTGCGAGAAGAAGTAAGCTGGGATACAGAAAACTCACACCCTCAACACACGATCACTAACCTG  1161
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  GACAAGAACAAGTGCGAGAAGAAGTAAGCTGGGATACAGAAAACTCACACCCTCAACACACGATCACTAACCTG  1332

Query 1162  TCACCATACACCAATGTCAGTGTGAAACTGATCCTCATGAACCCAGAGGGCCGGAAGGAAAGCCAAGAACTCAT  1235
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  TCACCATACACCAATGTCAGTGTGAAACTGATCCTCATGAACCCAGAGGGCCGGAAGGAAAGCCAAGAACTCAT  1406

Query 1236  AGTGCAGACAGATGAAGACCTCCCAGGTGCTGTTCCCACTGAATCCATACAAGGAAGTACCTTTGAAGAGAAGA  1309
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  AGTGCAGACAGATGAAGACCTCCCAGGTGCTGTTCCCACTGAATCCATACAAGGAAGTACCTTTGAAGAGAAGA  1480

Query 1310  TATTTCTTCAGTGGAGAGAACCAACTCAAACATATGGTGTAATCACTTTATATGAGATCACCTACAAAGCAGTC  1383
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  TATTTCTTCAGTGGAGAGAACCAACTCAAACATATGGTGTAATCACTTTATATGAGATCACCTACAAAGCAGTC  1554

Query 1384  AGTTCCTTTGACCCAGAAATAGATTTATCCAATCAGAGTGGAAGAGTTTCAAAGCTGGGAAATGAAACCCATTT  1457
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  AGTTCCTTTGACCCAGAAATAGATTTATCCAATCAGAGTGGAAGAGTTTCAAAGCTGGGAAATGAAACCCATTT  1628

Query 1458  CCTGTTTTTTGGACTGTATCCGGGGACCACATACTCCTTTACCATCCGAGCTAGCACAGCTAAGGGTTTTGGGC  1531
            .|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  TCTGTTTTTTGGACTGTATCCGGGGACCACATACTCCTTTACCATCCGAGCTAGCACAGCTAAGGGTTTTGGGC  1702

Query 1532  CTCCAGCAACAAACCAGTTCACCACCAAAATATCAGCACCCTCTATGCCAGCTTATGAACTTGAGACACCTTTG  1605
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  CTCCAGCAACAAACCAGTTCACCACCAAAATATCAGCACCCTCTATGCCAGCTTATGAACTTGAGACACCTTTG  1776

Query 1606  AATCAAACTGACAATACCGTGACAGTCATGCTGAAACCTGCCCACAGCAGAGGAGCACCTGTCAGTGTCTATCA  1679
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  AATCAAACTGACAATACCGTGACAGTCATGCTGAAACCTGCCCACAGCAGAGGAGCACCTGTCAGTGTCTATCA  1850

Query 1680  AATAGTTGTTGAGGAAGAACGTCCTCGAAGAACTAAAAAGACGACAGAAATCTTAAAGTGCTACCCAGTGCCAA  1753
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  AATAGTTGTTGAGGAAGAACGTCCTCGAAGAACTAAAAAGACGACAGAAATCTTAAAGTGCTACCCAGTGCCAA  1924

Query 1754  TTCACTTCCAGAATGCTTCTCTGCTGAACTCACAGTACTACTTTGCTGCAGAATTTCCTGCAGACAGCCTCCAA  1827
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  TTCACTTCCAGAATGCTTCTCTGCTGAACTCACAGTACTACTTTGCTGCAGAATTTCCTGCAGACAGCCTCCAA  1998

Query 1828  GCTGCGCAGCCTTTTACAATTGGTGATAATAAGACATATAATGGATACTGGAACACTCCCCTTCTCCCCTATAA  1901
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  GCTGCGCAGCCTTTTACAATTGGTGATAATAAGACATATAATGGATACTGGAACACTCCCCTTCTCCCCTATAA  2072

Query 1902  AAGCTACAGAATTTATTTCCAAGCTGCTAGTAGAGCCAATGGGGAAACCAAAATAGACTGTGTCCAAGTGGCCA  1975
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073  AAGCTACAGAATTTATTTCCAAGCTGCTAGTAGAGCCAATGGGGAAACCAAAATAGACTGTGTCCAAGTGGCCA  2146

Query 1976  CAAA----------------------------------------------------------------------  1979
            ||||                                                                      
Sbjct 2147  CAAAAGCTGCGATAATCGTGACTCAGCTTACAACACCTTACATTCGCATCGCCCCCGCTGCAGGCGACGGCCAA  2220

Query 1980  -----AGGAGCTGCCACTCCGAAACCAGTCCCAGAACCCGAGAAACAGACAGACCATACAGTTAAAATTGCTGG  2048
                 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221  CTAACAGGAGCTGCCACTCCGAAACCAGTCCCAGAACCCGAGAAACAGACAGACCATACAGTTAAAATTGCTGG  2294

Query 2049  AGTCATCGCGGGCATCTTGCTGTTCGTGATTATATTTCTTGGAGTTGTGTTGGTAATGAAGAAAAGGAAACTGG  2122
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |.||  
Sbjct 2295  AGTCATCGCGGGCATCTTGCTGTTCGTGATTATATTTCTTGGAGTTGTGTTGGTAATGAAGAAAAG--ATCT--  2364

Query 2123  CCAAGAAGCGGAAAGAGACCATGAGCA-GCACCCGACAGGAGATGACTGTGATGGTGAACTCAATGGACAAGAG  2195
                               .||||.|| .|..||                                        
Sbjct 2365  -------------------TATGAACATTCTTCC----------------------------------------  2379

Query 2196  CTATGCTGAGCAGGGCACAAACTGCGACGAGGCTTTCTCATTCATGGACACGCACAATCTGAATGGGAGATCTG  2269
                                                                                      
Sbjct 2380  --------------------------------------------------------------------------  2379

Query 2270  TGTCTTCACCATCGTCCTTCACAATGAAAACAAATACACTGAGCACATCGGTGCCTAATTCCTATTACCCAGAT  2343
                                                                                      
Sbjct 2380  --------------------------------------------------------------------------  2379

Query 2344  GAAACCCACACAATGGCCAGCGATACCAGCAGCCTGGTGCAGTCCCATACTTACAAGAAGCGAGAGCCGGCCGA  2417
                                                                                      
Sbjct 2380  --------------------------------------------------------------------------  2379

Query 2418  CGTGCCCTATCAGACTGGGCAGCTCCACCCCGCCATCCGGGTGGCAGACCTCCTTCAGCACATCACACAGATGA  2491
                                                                                      
Sbjct 2380  --------------------------------------------------------------------------  2379

Query 2492  AGTGTGCGGAGGGCTACGGCTTCAAGGAGGAATACGAGAGCTTCTTTGAAGGGCAGTCTGCACCATGGGACTCG  2565
                                                                                      
Sbjct 2380  --------------------------------------------------------------------------  2379

Query 2566  GCTAAGAAAGGTGAGAACAGAATGAAGAACAGATACGGGAATATCATTGCATACGATCATTCCCGAGTGAGGCT  2639
                                                                                      
Sbjct 2380  --------------------------------------------------------------------------  2379

Query 2640  GCAGACAATAGAAGGAGACACAAACTCAGACTATATCAATGGCAATTATATCGATGGTTATCATCGACCCAATC  2713
                                                                                      
Sbjct 2380  --------------------------------------------------------------------------  2379

Query 2714  ATTACATTGCTACCCAAGGGCCAATGCAGGAAACCATCTATGACTTCTGGAGGATGGTGTGGCACGAAAACACT  2787
                                                                                      
Sbjct 2380  --------------------------------------------------------------------------  2379

Query 2788  GCAAGTATCATCATGGTGACCAATCTTGTGGAAGTGGGAAGGGTCAAATGCTGCAAATACTGGCCAGATGACAC  2861
                                                                                      
Sbjct 2380  --------------------------------------------------------------------------  2379

Query 2862  AGAGATATATAAAGACATTAAAGTTACCCTAATAGAAACAGAACTACTGGCAGAATATGTGATAAGAACATTTG  2935
                                                                                      
Sbjct 2380  --------------------------------------------------------------------------  2379

Query 2936  CTGTTGAAAAGAGAGGTGTGCATGAAATCCGAGAGATCAGACAGTTTCACTTCACTGGCTGGCCGGATCGTGGG  3009
                                                                                      
Sbjct 2380  --------------------------------------------------------------------------  2379

Query 3010  GTCCCCTACCATGCCACCGGCCTGCTGGGATTCGTGCGGCAAGTCAAGTCCAAGAGCCCGCCCAGTGCAGGCCC  3083
                                                                                      
Sbjct 2380  --------------------------------------------------------------------------  2379

Query 3084  ACTGGTGGTGCACTGCAGTGCTGGTGCAGGGAGGACTGGCTGTTTCATCGTCATTGATATCATGTTGGACATGG  3157
                                                                                      
Sbjct 2380  --------------------------------------------------------------------------  2379

Query 3158  CCGAAAGGGAAGGGGTCGTAGACATCTACAACTGCGTCAGGGAGCTGCGGTCACGGAGGGTGAACATGGTGCAA  3231
                                                                                      
Sbjct 2380  --------------------------------------------------------------------------  2379

Query 3232  ACAGAGGAGCAGTATGTGTTTATCCACGATGCGATCCTGGAAGCCTGTCTTTGTGGGGACACCTCTGTGCCTGC  3305
                                                                                      
Sbjct 2380  --------------------------------------------------------------------------  2379

Query 3306  TTCCCAAGTTAGGTCTCTGTATTATGACATGAACAAACTGGATCCACAGACAAACTCAAGCCAGATTAAAGAGG  3379
                                                                                      
Sbjct 2380  --------------------------------------------------------------------------  2379

Query 3380  AATTCCGGACGCTAAACATGGTGACACCAACGCTGCGAGTAGAGGACTGCAGCATCGCACTGTTGCCCCGGAAC  3453
                                                                                      
Sbjct 2380  --------------------------------------------------------------------------  2379

Query 3454  CATGAGAAAAACCGGTGCATGGACATCCTGCCCCCAGACCGCTGCCTGCCCTTCCTCATCACCATCGATGGGGA  3527
                                                                                      
Sbjct 2380  --------------------------------------------------------------------------  2379

Query 3528  GAGCAGCAACTACATCAATGCTGCCCTCATGGACAGCTATAAACAGCCTTCAGCTTTTATAGTCACCCAGCATC  3601
                                                                                      
Sbjct 2380  --------------------------------------------------------------------------  2379

Query 3602  CTTTGCCAAACACAGTGAAAGACTTTTGGAGACTGGTCCTGGATTATCACTGCACATCCGTAGTTATGCTAAAT  3675
                                                                                      
Sbjct 2380  --------------------------------------------------------------------------  2379

Query 3676  GATGTGGATCCTGCCCAGTTGTGTCCACAGTACTGGCCAGAAAACGGAGTACACAGACACGGCCCCATCCAGGT  3749
                                                                                      
Sbjct 2380  --------------------------------------------------------------------------  2379

Query 3750  GGAATTTGTCTCTGCTGACCTGGAAGAGGACATCATCAGCAGGATATTCCGCATTTACAATGCCGCCAGACCCC  3823
                                                                                      
Sbjct 2380  --------------------------------------------------------------------------  2379

Query 3824  AAGATGGATATCGGATGGTGCAGCAATTCCAGTTCCTGGGCTGGCCGATGTACAGGGACACACCAGTGTCTAAG  3897
                                                                                      
Sbjct 2380  --------------------------------------------------------------------------  2379

Query 3898  CGCTCCTTCTTGAAGCTCATTCGCCAGGTGGACAAGTGGCAAGAGGAATACAATGGCGGGGAAGGCCGCACCGT  3971
                                                                                      
Sbjct 2380  --------------------------------------------------------------------------  2379

Query 3972  TGTGCACTGCTTGAACGGGGGAGGCCGCAGTGGGACGTTCTGCGCCATCAGCATCGTATGTGAGATGCTCCGGC  4045
                                                                                      
Sbjct 2380  --------------------------------------------------------------------------  2379

Query 4046  ACCAGAGAACCGTGGATGTCTTTCACGCTGTGAAGACACTGAGGAACAACAAGCCCAACATGGTCGACCTCCTG  4119
                                                                                      
Sbjct 2380  --------------------------------------------------------------------------  2379

Query 4120  GATCAGTACAAGTTCTGCTACGAGGTGGCCCTGGAATACTTGAATTCTGGC  4170
                                                               
Sbjct 2380  ---------------------------------------------------  2379