Nucleotide Global Alignment

Description

Query:
TRCN0000481469
Subject:
XM_006530718.3
Aligned Length:
2962
Identities:
1765
Gaps:
980

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGTTCTGGGCCGAGCAGCTGTTTGGAAAGAGGACCCTGGCAGGCTCCTGGAGCTCCAGAGACAAAGACAGGCC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGAAGTGGAGACTGGAGTCACACGGCAGAATAAGCTTGCCCGGCACCCAGAAGAGGTTACTGAGCCCCGGGCCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TGGTCCCCTCTCGCAGGACGTGGAACTTGGGAGCCACGCCTTCACTGCGAGGCCTGTGGAGAGTGGGCCGGGTC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CAGGAGCCCAAGCCCGGGATGGCTCGCCCCGCCCCAGCCAGCCCAGCCGCCCGCCCTTTCCCACACACCGGCCA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GGGGAGGTTGAGAACTGGGCGTGGAAAAGATATTCTACCCAGTGGCGAGGAAGACTCCACTTCTCGGACTGCAG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CTCGCCCGTCTCTTGCACAGTGTCGAGCCCTCAGCGTGGACTGGCCTGGCCCTAGGAGTCCCCATAGACTCTAC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CTGACAGTGCAGGCCCTGCGGGACAAGGGGTGCGAGAGCAAGAGTCAGGGGACGAAAGAAGACGAGCTCCCGAA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GAGGCAGGCGCCGGCCCCCAGGCGGGACCGGGAGGCCCCAGAAGCTGGTGGTACCATGAATGTAGAAAATACAG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GTGGGCGGCTCTTTGGCATCGGGAGGTGCTCAAGCCTGTCCGGGGCACCAGGCCCAGACCCCGTGGTACATAGG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  ACCGTGGAGGCCATGTCCCAGCTTCAGGAGGAGCTGGTAGTCCTTCGGGAGAGGCTGGCCCTCCACGACAGTGA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CCGGCAAGCCACAACCACCCAGCTGCAGAACCAGGTGGAGAATCTAAAGGAAAAGCTCATTAGCCAGGCCCAGG  814

Query    1  --------------------------------------------------------------ATGGTGGAGAAT  12
                                                                          ||||||||||||
Sbjct  815  AAGTGAGCCGACTGCGATCAGAACTGGGAGGCACGGACGCGGAGAAGCACAGGGACAGACTGATGGTGGAGAAT  888

Query   13  GAGCGACTGAGGCAGGAGATGCGGCGCTGTGAGGCCGAGCTGCAAGAGCTGCGCACAAAGCCAGCAGGT----C  82
            ||||..||||||||||||.||.||||||||||||.|||.|||||.|||||.||..|    |||||.|||    |
Sbjct  889  GAGCAGCTGAGGCAGGAGCTGAGGCGCTGTGAGGTCGAACTGCAGGAGCTTCGGGC----CCAGCCGGTGGTGC  958

Query   83  CCTGCCCAGGTTGTGAGCACAGCCAGGAGAGCGCCCAGCTCCGTGACAAGCTGTCCCAGCTGCAGCTGGAGATG  156
            |||||...||.|||||||||||||||||||||..|||||||||||||||||||||||||||||||.||||..||
Sbjct  959  CCTGCGAGGGCTGTGAGCACAGCCAGGAGAGCAGCCAGCTCCGTGACAAGCTGTCCCAGCTGCAGTTGGAAGTG  1032

Query  157  GCGGAAAGCAAAGGCATGCTGTCAGAGCTGAACCTAGAGGTGCAGCAGAAGACCGACCGGCTGGCTGAGGTGGA  230
            ||.||.|.|||||||||||||||.||.||||||||.||||||||||||||.||.|||||||||||.|||||.||
Sbjct 1033  GCTGAGAACAAAGGCATGCTGTCGGAACTGAACCTGGAGGTGCAGCAGAAAACGGACCGGCTGGCAGAGGTAGA  1106

Query  231  GCTGCGACTCAAGGACTGCCTGGCTGAGAAGGCACAGGAGGAGGAGCGGCTTAGTCGGCGCCTGCGTGACAGCC  304
            ||||||.|||||||||||.|||||||||||.||.|||||||||||.|||||.||.|||||||||||||||||||
Sbjct 1107  GCTGCGCCTCAAGGACTGTCTGGCTGAGAAAGCCCAGGAGGAGGAACGGCTCAGCCGGCGCCTGCGTGACAGCC  1180

Query  305  ACGAGACCATTGCCAGCCTGCGGGCCCAGTCCCCACCTGTCAAGTATGTCATCAAGACAGTGGAGGTGGAGTCG  378
            |.|||||.||.|||||.|||.|||||||||||||||||||.||||||||||||||||||||||||||.|||||.
Sbjct 1181  ATGAGACTATCGCCAGTCTGAGGGCCCAGTCCCCACCTGTTAAGTATGTCATCAAGACAGTGGAGGTAGAGTCT  1254

Query  379  TCCAAGACCAAGCAGGCCCTCAGCGAGTCCCAGGCCCGGAACCAGCACCTGCAGGAGCAGGTGGCTATGCAGAG  452
            |||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||.|||||.||||||.|
Sbjct 1255  TCCAAGACCAAGCAGGCCCTCAGCGAGTCCCAGACCCGGAACCAGCACCTGCAGGAGCAAGTGGCCATGCAGCG  1328

Query  453  GCAGGTGCTGAAGGAGATGGAACAGCAGCTGCAGAGCTCACACCAGCTGACCGCGCGGCTCCGGGCGCAGATTG  526
            |||||||||||||||||||||.||||||||.||||.|||.|||||||||||.|..|.|.|.|||||.|||||||
Sbjct 1329  GCAGGTGCTGAAGGAGATGGAGCAGCAGCTACAGAACTCCCACCAGCTGACAGTCCAGTTGCGGGCTCAGATTG  1402

Query  527  CCATGTACGAGTCAGAGCTGGAGCGGGCCCATGGGCAGATGCTGGAGGAGATGCAGTCCCTGGAAGAGGACAAG  600
            |||||||.|||.||||||||||||||||.||.|||||||||||||||||||||||||||.||||.|||||.|||
Sbjct 1403  CCATGTATGAGGCAGAGCTGGAGCGGGCACACGGGCAGATGCTGGAGGAGATGCAGTCCTTGGAGGAGGATAAG  1476

Query  601  AACCGGGCCATTGAGGAGGCCTTTGCCAGAGCCCAGGTGGAGATGAAGGCTGTGCACGAGAATCTAGCAGGCGT  674
            ||||||||||||||||||||||||||..|.||||||||||||||||||||.||.||||||||.||.|||||.||
Sbjct 1477  AACCGGGCCATTGAGGAGGCCTTTGCACGGGCCCAGGTGGAGATGAAGGCAGTACACGAGAACCTGGCAGGTGT  1550

Query  675  CCGGACCAACTTGCTGACCTTGCAGCCGGCACTGCGGACCCTCACCAACGACTACAATGGGCTCAAGCGGCAGG  748
            |.||||||||.|||||||..|||||||.||.|||.|||||||||||||||||||||||||||||||||||||||
Sbjct 1551  CAGGACCAACCTGCTGACGCTGCAGCCTGCGCTGAGGACCCTCACCAACGACTACAATGGGCTCAAGCGGCAGG  1624

Query  749  TGCGCGTCTTCCCACTGCTGCTGCAGGAGGCCCTCAGGAGTGTCAAGGCCGAGATAGGCCAGGCCATCGAGGAG  822
            ||||.|.||||||..||||||||||||||||.||||||||||||||.||.|||||.||||||||||||||||||
Sbjct 1625  TGCGGGGCTTCCCCTTGCTGCTGCAGGAGGCTCTCAGGAGTGTCAAAGCTGAGATCGGCCAGGCCATCGAGGAG  1698

Query  823  GTCAACAGCAACAACCAGGAGCTGCTGCGCAAGTACCGCCGCGAGCTGCAGCTGCGTAAGAAGTGCCACAATGA  896
            ||.||.||||||||||||||||||.||||||||||||||||.||.||.||||||||.|||||.|||||.||.||
Sbjct 1699  GTTAATAGCAACAACCAGGAGCTGTTGCGCAAGTACCGCCGGGAACTACAGCTGCGCAAGAAATGCCATAACGA  1772

Query  897  GCTCGTGCGGCTGAAAGGGAACATCCGAGTGATTGCTCGTGTCCGGCCAGTCACCAAAGAGGATGGGGAAGGAC  970
            |||.||.||||||||.||.||||||||.||||||||.||.|||||||||||||||||.||||||||.|||||||
Sbjct 1773  GCTGGTCCGGCTGAAGGGAAACATCCGGGTGATTGCCCGAGTCCGGCCAGTCACCAAGGAGGATGGAGAAGGAC  1846

Query  971  CTGAGGCCACCAATGCTGTGACTTTCGATGCCGACGACGACTCCATCATCCACCTGCTGCACAAGGGCAAGCCT  1044
            |.|||||.||||||||||||||.||.||..|.||.||.|||||||||||||||||||||||||||||||||||.
Sbjct 1847  CCGAGGCAACCAATGCTGTGACCTTTGACCCTGATGATGACTCCATCATCCACCTGCTGCACAAGGGCAAGCCC  1920

Query 1045  GTGTCCTTCGAGCTGGACAAGGTCTTCTCCCCACAGGCCTCGCAGCAGGACGTGTTCCAGGAGGTGCAGGCCCT  1118
            ||||||||||||||||||||||||||||||||...|||.||.||||||||||||||||||||||||||||||||
Sbjct 1921  GTGTCCTTCGAGCTGGACAAGGTCTTCTCCCCGTGGGCTTCCCAGCAGGACGTGTTCCAGGAGGTGCAGGCCCT  1994

Query 1119  GGTCACCTCTTGCATTGATGGCTTCAATGTCTGCATCTTTGCGTACGGCCAGACGGGCGCCGGCAAGACGTACA  1192
            ..|.|||||.|||||.|||||||||||||||||.||||||||.|||||||||||.||.|||||||||||.||.|
Sbjct 1995  CATTACCTCCTGCATCGATGGCTTCAATGTCTGTATCTTTGCTTACGGCCAGACAGGTGCCGGCAAGACATATA  2068

Query 1193  CGATGGAGGGGACCGCTGAGAACCCAGGTATCAACCAGCGGGCCCTGCAGCTGCTCTTCTCCGAGGTGCAGGAG  1266
            |.|||||||||||..|.||||||||.||.||||||||||||||||||||||||||||||||.||||||||||||
Sbjct 2069  CAATGGAGGGGACTCCCGAGAACCCGGGCATCAACCAGCGGGCCCTGCAGCTGCTCTTCTCGGAGGTGCAGGAG  2142

Query 1267  AAGGCGTCTGACTGGGAGTACACCATCACCGTCAGCGCTGCGGAGATCTACAATGAGGTCCTCAGGGACCTGCT  1340
            |||||||||||||||.||||||.|||||||||||||||.||.|||||.||||||||.|||||||||||||||||
Sbjct 2143  AAGGCGTCTGACTGGCAGTACAACATCACCGTCAGCGCAGCTGAGATTTACAATGAAGTCCTCAGGGACCTGCT  2216

Query 1341  AGGGAAAGAGCCTCAGGAAAAACTGGAGATCCGGCTGTGCCCAGACGGCAGTGGGCAGCTGTATGTACCAGGGC  1414
            .|||||||||||||||||.||.|||||||||||.||||||||.||.|||||||||||.||||||||.|||||||
Sbjct 2217  GGGGAAAGAGCCTCAGGAGAAGCTGGAGATCCGACTGTGCCCGGATGGCAGTGGGCAACTGTATGTGCCAGGGC  2290

Query 1415  TGACTGAGTTCCAAGTGCAGAGCGTGGACGACATCAACAAGGTGTTTGAGTTTGGCCACACTAATCGCACGACC  1488
            |||||||||||||.||||||||||||||.|||||||||||||||||||||||||||.|||..||.|||||.|||
Sbjct 2291  TGACTGAGTTCCAGGTGCAGAGCGTGGATGACATCAACAAGGTGTTTGAGTTTGGCTACAACAACCGCACCACC  2364

Query 1489  GAGTTCACCAACCTGAACGAGCACAGCTCCCGCTCGCACGCACTGCTCATCGTGACGGTGCGAGGCGTGGACTG  1562
            ||||||||||||||||||||.||||||||||||||.|||||.||||||||||||||.|||.||||.|||||.||
Sbjct 2365  GAGTTCACCAACCTGAACGAACACAGCTCCCGCTCCCACGCTCTGCTCATCGTGACAGTGAGAGGTGTGGATTG  2438

Query 1563  CAGCACAGGCCTCCGCACCACGGGGAAGCTGAACCTGGTGGACTTGGCTGGCTCGGAGCGCGTGGGCAAGTCGG  1636
            |||||||||||||||||||||||||||||||||||||||||||.|||||||.||.|||||.|||||||||||||
Sbjct 2439  CAGCACAGGCCTCCGCACCACGGGGAAGCTGAACCTGGTGGACCTGGCTGGTTCAGAGCGTGTGGGCAAGTCGG  2512

Query 1637  GGGCCGAGGGCAGCCGCCTGCGGGAGGCGCAGCACATCAACAAGTCGCTGTCGGCTCTGGGGGACGTCATTGCT  1710
            ||||.|||||||.|||||||||.|||||.|||||||||||||.|||.||.||.||.||||||||||||||||||
Sbjct 2513  GGGCTGAGGGCAACCGCCTGCGAGAGGCACAGCACATCAACAGGTCACTATCCGCCCTGGGGGACGTCATTGCT  2586

Query 1711  GCCCTGCGCTCCCGCCAGGGCCACGTGCCCTTCCGCAACTCCAAGCTCACCTACCTGCTGCAGGATTCGCTTAG  1784
            ||||||||.||.||.||.|||||.||||||||||||||.|||||.||||||||||||||||||||.||.||.||
Sbjct 2587  GCCCTGCGTTCTCGACAAGGCCATGTGCCCTTCCGCAATTCCAAACTCACCTACCTGCTGCAGGACTCACTCAG  2660

Query 1785  TGGTGACAGCAAGACCCTCATGGTGGTACAGGTGTCCCCCGTGGAGAAGAACACTAGCGAGACGCTCTATTCCC  1858
            ||||||||||||||||||.||||||||||||||||||||.||||||||||||||.||||||||.||.||.||||
Sbjct 2661  TGGTGACAGCAAGACCCTTATGGTGGTACAGGTGTCCCCAGTGGAGAAGAACACCAGCGAGACTCTGTACTCCC  2734

Query 1859  TCAAGTTTGCTGAGAGGGTGCGCTCTGTGGAGCTGGGGCCTGGGCTACGCAGGGCAGAGCTTGGGTCCTGGTCA  1932
            |||..||||||||||||||.||||||||||||.||||.||||||...|||.|..|||||||.||.|||||||||
Sbjct 2735  TCAGATTTGCTGAGAGGGTTCGCTCTGTGGAGTTGGGCCCTGGGTCCCGCCGCACAGAGCTGGGTTCCTGGTCA  2808

Query 1933  AGCCAGGAGCATCTAGAGTGGGAGCCGGCTTGTCAGACGCCACAGCC---------------CTCGGCC-----  1986
            |||||||||||.||.|||||||||||||||||.|||||.||||||||               |||.|||     
Sbjct 2809  AGCCAGGAGCACCTGGAGTGGGAGCCGGCTTGCCAGACACCACAGCCTACAGCACGAGCCCACTCTGCCCCTGG  2882

Query 1987  --------------------------------------------------------------------------  1986
                                                                                      
Sbjct 2883  CTCTGGGACCAGTAGCCGCCCAGGTTCCATCCGAAGGAAACTGCAGCCGTCAGGGAAGTTGAGGCCAGTGCCTG  2956

Query 1987  --  1986
              
Sbjct 2957  TG  2958

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