Nucleotide Global Alignment
Description
- Query:
- TRCN0000481469
- Subject:
- XM_006530718.3
- Aligned Length:
- 2962
- Identities:
- 1765
- Gaps:
- 980
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTTCTGGGCCGAGCAGCTGTTTGGAAAGAGGACCCTGGCAGGCTCCTGGAGCTCCAGAGACAAAGACAGGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGAAGTGGAGACTGGAGTCACACGGCAGAATAAGCTTGCCCGGCACCCAGAAGAGGTTACTGAGCCCCGGGCCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGGTCCCCTCTCGCAGGACGTGGAACTTGGGAGCCACGCCTTCACTGCGAGGCCTGTGGAGAGTGGGCCGGGTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAGGAGCCCAAGCCCGGGATGGCTCGCCCCGCCCCAGCCAGCCCAGCCGCCCGCCCTTTCCCACACACCGGCCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGGGAGGTTGAGAACTGGGCGTGGAAAAGATATTCTACCCAGTGGCGAGGAAGACTCCACTTCTCGGACTGCAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTCGCCCGTCTCTTGCACAGTGTCGAGCCCTCAGCGTGGACTGGCCTGGCCCTAGGAGTCCCCATAGACTCTAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTGACAGTGCAGGCCCTGCGGGACAAGGGGTGCGAGAGCAAGAGTCAGGGGACGAAAGAAGACGAGCTCCCGAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAGGCAGGCGCCGGCCCCCAGGCGGGACCGGGAGGCCCCAGAAGCTGGTGGTACCATGAATGTAGAAAATACAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTGGGCGGCTCTTTGGCATCGGGAGGTGCTCAAGCCTGTCCGGGGCACCAGGCCCAGACCCCGTGGTACATAGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACCGTGGAGGCCATGTCCCAGCTTCAGGAGGAGCTGGTAGTCCTTCGGGAGAGGCTGGCCCTCCACGACAGTGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCGGCAAGCCACAACCACCCAGCTGCAGAACCAGGTGGAGAATCTAAAGGAAAAGCTCATTAGCCAGGCCCAGG 814
Query 1 --------------------------------------------------------------ATGGTGGAGAAT 12
||||||||||||
Sbjct 815 AAGTGAGCCGACTGCGATCAGAACTGGGAGGCACGGACGCGGAGAAGCACAGGGACAGACTGATGGTGGAGAAT 888
Query 13 GAGCGACTGAGGCAGGAGATGCGGCGCTGTGAGGCCGAGCTGCAAGAGCTGCGCACAAAGCCAGCAGGT----C 82
||||..||||||||||||.||.||||||||||||.|||.|||||.|||||.||..| |||||.||| |
Sbjct 889 GAGCAGCTGAGGCAGGAGCTGAGGCGCTGTGAGGTCGAACTGCAGGAGCTTCGGGC----CCAGCCGGTGGTGC 958
Query 83 CCTGCCCAGGTTGTGAGCACAGCCAGGAGAGCGCCCAGCTCCGTGACAAGCTGTCCCAGCTGCAGCTGGAGATG 156
|||||...||.|||||||||||||||||||||..|||||||||||||||||||||||||||||||.||||..||
Sbjct 959 CCTGCGAGGGCTGTGAGCACAGCCAGGAGAGCAGCCAGCTCCGTGACAAGCTGTCCCAGCTGCAGTTGGAAGTG 1032
Query 157 GCGGAAAGCAAAGGCATGCTGTCAGAGCTGAACCTAGAGGTGCAGCAGAAGACCGACCGGCTGGCTGAGGTGGA 230
||.||.|.|||||||||||||||.||.||||||||.||||||||||||||.||.|||||||||||.|||||.||
Sbjct 1033 GCTGAGAACAAAGGCATGCTGTCGGAACTGAACCTGGAGGTGCAGCAGAAAACGGACCGGCTGGCAGAGGTAGA 1106
Query 231 GCTGCGACTCAAGGACTGCCTGGCTGAGAAGGCACAGGAGGAGGAGCGGCTTAGTCGGCGCCTGCGTGACAGCC 304
||||||.|||||||||||.|||||||||||.||.|||||||||||.|||||.||.|||||||||||||||||||
Sbjct 1107 GCTGCGCCTCAAGGACTGTCTGGCTGAGAAAGCCCAGGAGGAGGAACGGCTCAGCCGGCGCCTGCGTGACAGCC 1180
Query 305 ACGAGACCATTGCCAGCCTGCGGGCCCAGTCCCCACCTGTCAAGTATGTCATCAAGACAGTGGAGGTGGAGTCG 378
|.|||||.||.|||||.|||.|||||||||||||||||||.||||||||||||||||||||||||||.|||||.
Sbjct 1181 ATGAGACTATCGCCAGTCTGAGGGCCCAGTCCCCACCTGTTAAGTATGTCATCAAGACAGTGGAGGTAGAGTCT 1254
Query 379 TCCAAGACCAAGCAGGCCCTCAGCGAGTCCCAGGCCCGGAACCAGCACCTGCAGGAGCAGGTGGCTATGCAGAG 452
|||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||.|||||.||||||.|
Sbjct 1255 TCCAAGACCAAGCAGGCCCTCAGCGAGTCCCAGACCCGGAACCAGCACCTGCAGGAGCAAGTGGCCATGCAGCG 1328
Query 453 GCAGGTGCTGAAGGAGATGGAACAGCAGCTGCAGAGCTCACACCAGCTGACCGCGCGGCTCCGGGCGCAGATTG 526
|||||||||||||||||||||.||||||||.||||.|||.|||||||||||.|..|.|.|.|||||.|||||||
Sbjct 1329 GCAGGTGCTGAAGGAGATGGAGCAGCAGCTACAGAACTCCCACCAGCTGACAGTCCAGTTGCGGGCTCAGATTG 1402
Query 527 CCATGTACGAGTCAGAGCTGGAGCGGGCCCATGGGCAGATGCTGGAGGAGATGCAGTCCCTGGAAGAGGACAAG 600
|||||||.|||.||||||||||||||||.||.|||||||||||||||||||||||||||.||||.|||||.|||
Sbjct 1403 CCATGTATGAGGCAGAGCTGGAGCGGGCACACGGGCAGATGCTGGAGGAGATGCAGTCCTTGGAGGAGGATAAG 1476
Query 601 AACCGGGCCATTGAGGAGGCCTTTGCCAGAGCCCAGGTGGAGATGAAGGCTGTGCACGAGAATCTAGCAGGCGT 674
||||||||||||||||||||||||||..|.||||||||||||||||||||.||.||||||||.||.|||||.||
Sbjct 1477 AACCGGGCCATTGAGGAGGCCTTTGCACGGGCCCAGGTGGAGATGAAGGCAGTACACGAGAACCTGGCAGGTGT 1550
Query 675 CCGGACCAACTTGCTGACCTTGCAGCCGGCACTGCGGACCCTCACCAACGACTACAATGGGCTCAAGCGGCAGG 748
|.||||||||.|||||||..|||||||.||.|||.|||||||||||||||||||||||||||||||||||||||
Sbjct 1551 CAGGACCAACCTGCTGACGCTGCAGCCTGCGCTGAGGACCCTCACCAACGACTACAATGGGCTCAAGCGGCAGG 1624
Query 749 TGCGCGTCTTCCCACTGCTGCTGCAGGAGGCCCTCAGGAGTGTCAAGGCCGAGATAGGCCAGGCCATCGAGGAG 822
||||.|.||||||..||||||||||||||||.||||||||||||||.||.|||||.||||||||||||||||||
Sbjct 1625 TGCGGGGCTTCCCCTTGCTGCTGCAGGAGGCTCTCAGGAGTGTCAAAGCTGAGATCGGCCAGGCCATCGAGGAG 1698
Query 823 GTCAACAGCAACAACCAGGAGCTGCTGCGCAAGTACCGCCGCGAGCTGCAGCTGCGTAAGAAGTGCCACAATGA 896
||.||.||||||||||||||||||.||||||||||||||||.||.||.||||||||.|||||.|||||.||.||
Sbjct 1699 GTTAATAGCAACAACCAGGAGCTGTTGCGCAAGTACCGCCGGGAACTACAGCTGCGCAAGAAATGCCATAACGA 1772
Query 897 GCTCGTGCGGCTGAAAGGGAACATCCGAGTGATTGCTCGTGTCCGGCCAGTCACCAAAGAGGATGGGGAAGGAC 970
|||.||.||||||||.||.||||||||.||||||||.||.|||||||||||||||||.||||||||.|||||||
Sbjct 1773 GCTGGTCCGGCTGAAGGGAAACATCCGGGTGATTGCCCGAGTCCGGCCAGTCACCAAGGAGGATGGAGAAGGAC 1846
Query 971 CTGAGGCCACCAATGCTGTGACTTTCGATGCCGACGACGACTCCATCATCCACCTGCTGCACAAGGGCAAGCCT 1044
|.|||||.||||||||||||||.||.||..|.||.||.|||||||||||||||||||||||||||||||||||.
Sbjct 1847 CCGAGGCAACCAATGCTGTGACCTTTGACCCTGATGATGACTCCATCATCCACCTGCTGCACAAGGGCAAGCCC 1920
Query 1045 GTGTCCTTCGAGCTGGACAAGGTCTTCTCCCCACAGGCCTCGCAGCAGGACGTGTTCCAGGAGGTGCAGGCCCT 1118
||||||||||||||||||||||||||||||||...|||.||.||||||||||||||||||||||||||||||||
Sbjct 1921 GTGTCCTTCGAGCTGGACAAGGTCTTCTCCCCGTGGGCTTCCCAGCAGGACGTGTTCCAGGAGGTGCAGGCCCT 1994
Query 1119 GGTCACCTCTTGCATTGATGGCTTCAATGTCTGCATCTTTGCGTACGGCCAGACGGGCGCCGGCAAGACGTACA 1192
..|.|||||.|||||.|||||||||||||||||.||||||||.|||||||||||.||.|||||||||||.||.|
Sbjct 1995 CATTACCTCCTGCATCGATGGCTTCAATGTCTGTATCTTTGCTTACGGCCAGACAGGTGCCGGCAAGACATATA 2068
Query 1193 CGATGGAGGGGACCGCTGAGAACCCAGGTATCAACCAGCGGGCCCTGCAGCTGCTCTTCTCCGAGGTGCAGGAG 1266
|.|||||||||||..|.||||||||.||.||||||||||||||||||||||||||||||||.||||||||||||
Sbjct 2069 CAATGGAGGGGACTCCCGAGAACCCGGGCATCAACCAGCGGGCCCTGCAGCTGCTCTTCTCGGAGGTGCAGGAG 2142
Query 1267 AAGGCGTCTGACTGGGAGTACACCATCACCGTCAGCGCTGCGGAGATCTACAATGAGGTCCTCAGGGACCTGCT 1340
|||||||||||||||.||||||.|||||||||||||||.||.|||||.||||||||.|||||||||||||||||
Sbjct 2143 AAGGCGTCTGACTGGCAGTACAACATCACCGTCAGCGCAGCTGAGATTTACAATGAAGTCCTCAGGGACCTGCT 2216
Query 1341 AGGGAAAGAGCCTCAGGAAAAACTGGAGATCCGGCTGTGCCCAGACGGCAGTGGGCAGCTGTATGTACCAGGGC 1414
.|||||||||||||||||.||.|||||||||||.||||||||.||.|||||||||||.||||||||.|||||||
Sbjct 2217 GGGGAAAGAGCCTCAGGAGAAGCTGGAGATCCGACTGTGCCCGGATGGCAGTGGGCAACTGTATGTGCCAGGGC 2290
Query 1415 TGACTGAGTTCCAAGTGCAGAGCGTGGACGACATCAACAAGGTGTTTGAGTTTGGCCACACTAATCGCACGACC 1488
|||||||||||||.||||||||||||||.|||||||||||||||||||||||||||.|||..||.|||||.|||
Sbjct 2291 TGACTGAGTTCCAGGTGCAGAGCGTGGATGACATCAACAAGGTGTTTGAGTTTGGCTACAACAACCGCACCACC 2364
Query 1489 GAGTTCACCAACCTGAACGAGCACAGCTCCCGCTCGCACGCACTGCTCATCGTGACGGTGCGAGGCGTGGACTG 1562
||||||||||||||||||||.||||||||||||||.|||||.||||||||||||||.|||.||||.|||||.||
Sbjct 2365 GAGTTCACCAACCTGAACGAACACAGCTCCCGCTCCCACGCTCTGCTCATCGTGACAGTGAGAGGTGTGGATTG 2438
Query 1563 CAGCACAGGCCTCCGCACCACGGGGAAGCTGAACCTGGTGGACTTGGCTGGCTCGGAGCGCGTGGGCAAGTCGG 1636
|||||||||||||||||||||||||||||||||||||||||||.|||||||.||.|||||.|||||||||||||
Sbjct 2439 CAGCACAGGCCTCCGCACCACGGGGAAGCTGAACCTGGTGGACCTGGCTGGTTCAGAGCGTGTGGGCAAGTCGG 2512
Query 1637 GGGCCGAGGGCAGCCGCCTGCGGGAGGCGCAGCACATCAACAAGTCGCTGTCGGCTCTGGGGGACGTCATTGCT 1710
||||.|||||||.|||||||||.|||||.|||||||||||||.|||.||.||.||.||||||||||||||||||
Sbjct 2513 GGGCTGAGGGCAACCGCCTGCGAGAGGCACAGCACATCAACAGGTCACTATCCGCCCTGGGGGACGTCATTGCT 2586
Query 1711 GCCCTGCGCTCCCGCCAGGGCCACGTGCCCTTCCGCAACTCCAAGCTCACCTACCTGCTGCAGGATTCGCTTAG 1784
||||||||.||.||.||.|||||.||||||||||||||.|||||.||||||||||||||||||||.||.||.||
Sbjct 2587 GCCCTGCGTTCTCGACAAGGCCATGTGCCCTTCCGCAATTCCAAACTCACCTACCTGCTGCAGGACTCACTCAG 2660
Query 1785 TGGTGACAGCAAGACCCTCATGGTGGTACAGGTGTCCCCCGTGGAGAAGAACACTAGCGAGACGCTCTATTCCC 1858
||||||||||||||||||.||||||||||||||||||||.||||||||||||||.||||||||.||.||.||||
Sbjct 2661 TGGTGACAGCAAGACCCTTATGGTGGTACAGGTGTCCCCAGTGGAGAAGAACACCAGCGAGACTCTGTACTCCC 2734
Query 1859 TCAAGTTTGCTGAGAGGGTGCGCTCTGTGGAGCTGGGGCCTGGGCTACGCAGGGCAGAGCTTGGGTCCTGGTCA 1932
|||..||||||||||||||.||||||||||||.||||.||||||...|||.|..|||||||.||.|||||||||
Sbjct 2735 TCAGATTTGCTGAGAGGGTTCGCTCTGTGGAGTTGGGCCCTGGGTCCCGCCGCACAGAGCTGGGTTCCTGGTCA 2808
Query 1933 AGCCAGGAGCATCTAGAGTGGGAGCCGGCTTGTCAGACGCCACAGCC---------------CTCGGCC----- 1986
|||||||||||.||.|||||||||||||||||.|||||.|||||||| |||.|||
Sbjct 2809 AGCCAGGAGCACCTGGAGTGGGAGCCGGCTTGCCAGACACCACAGCCTACAGCACGAGCCCACTCTGCCCCTGG 2882
Query 1987 -------------------------------------------------------------------------- 1986
Sbjct 2883 CTCTGGGACCAGTAGCCGCCCAGGTTCCATCCGAAGGAAACTGCAGCCGTCAGGGAAGTTGAGGCCAGTGCCTG 2956
Query 1987 -- 1986
Sbjct 2957 TG 2958
