Nucleotide Global Alignment
Description
- Query:
- TRCN0000481469
- Subject:
- XM_006530723.3
- Aligned Length:
- 2644
- Identities:
- 1765
- Gaps:
- 662
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTTCTGGGCCGAGCAGCTGTTTGGAAAGAGGACCCTGGCAGGCTCCTGGAGCTCCAGAGACAAAGACAGGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGAAGTGGAGACTGGAGTCACACGGCAGAATAAGCTTGCCCGGCACCCAGAAGAGGTTACTGAGCCCCGGGCCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGGTCCCCTCTCGCAGGACGTGGAACTTGGGAGCCACGCCTTCACTGCGAGGCCTGTGGAGAGTGGGCCGGGTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAGGAGCCCAAGCCCGGGATGGCTCGCCCCGCCCCAGCCAGCCCAGCCGCCCGCCCTTTCCCACACACCGGCCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGGGAGGTTGAGAACTGGGCGTGGAAAAGATATTCTACCCAGTGGCGAGGAAGACTCCACTTCTCGGACTGCAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTCGCCCGTCTCTTGCACAGTGTCGAGCCCTCAGCGTGGACTGGCCTGGCCCTAGGAGTCCCCATAGACTCTAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTGACAGTGCAGGTGGAGAATCTAAAGGAAAAGCTCATTAGCCAGGCCCAGGAAGTGAGCCGACTGCGATCAGA 518
Query 1 ----------------------------------------ATGGTGGAGAATGAGCGACTGAGGCAGGAGATGC 34
||||||||||||||||..||||||||||||.||.
Sbjct 519 ACTGGGAGGCACGGACGCGGAGAAGCACAGGGACAGACTGATGGTGGAGAATGAGCAGCTGAGGCAGGAGCTGA 592
Query 35 GGCGCTGTGAGGCCGAGCTGCAAGAGCTGCGCACAAAGCCAGCAGGT----CCCTGCCCAGGTTGTGAGCACAG 104
||||||||||||.|||.|||||.|||||.||..| |||||.||| ||||||...||.|||||||||||
Sbjct 593 GGCGCTGTGAGGTCGAACTGCAGGAGCTTCGGGC----CCAGCCGGTGGTGCCCTGCGAGGGCTGTGAGCACAG 662
Query 105 CCAGGAGAGCGCCCAGCTCCGTGACAAGCTGTCCCAGCTGCAGCTGGAGATGGCGGAAAGCAAAGGCATGCTGT 178
||||||||||..|||||||||||||||||||||||||||||||.||||..||||.||.|.||||||||||||||
Sbjct 663 CCAGGAGAGCAGCCAGCTCCGTGACAAGCTGTCCCAGCTGCAGTTGGAAGTGGCTGAGAACAAAGGCATGCTGT 736
Query 179 CAGAGCTGAACCTAGAGGTGCAGCAGAAGACCGACCGGCTGGCTGAGGTGGAGCTGCGACTCAAGGACTGCCTG 252
|.||.||||||||.||||||||||||||.||.|||||||||||.|||||.||||||||.|||||||||||.|||
Sbjct 737 CGGAACTGAACCTGGAGGTGCAGCAGAAAACGGACCGGCTGGCAGAGGTAGAGCTGCGCCTCAAGGACTGTCTG 810
Query 253 GCTGAGAAGGCACAGGAGGAGGAGCGGCTTAGTCGGCGCCTGCGTGACAGCCACGAGACCATTGCCAGCCTGCG 326
||||||||.||.|||||||||||.|||||.||.||||||||||||||||||||.|||||.||.|||||.|||.|
Sbjct 811 GCTGAGAAAGCCCAGGAGGAGGAACGGCTCAGCCGGCGCCTGCGTGACAGCCATGAGACTATCGCCAGTCTGAG 884
Query 327 GGCCCAGTCCCCACCTGTCAAGTATGTCATCAAGACAGTGGAGGTGGAGTCGTCCAAGACCAAGCAGGCCCTCA 400
||||||||||||||||||.||||||||||||||||||||||||||.|||||.||||||||||||||||||||||
Sbjct 885 GGCCCAGTCCCCACCTGTTAAGTATGTCATCAAGACAGTGGAGGTAGAGTCTTCCAAGACCAAGCAGGCCCTCA 958
Query 401 GCGAGTCCCAGGCCCGGAACCAGCACCTGCAGGAGCAGGTGGCTATGCAGAGGCAGGTGCTGAAGGAGATGGAA 474
|||||||||||.|||||||||||||||||||||||||.|||||.||||||.||||||||||||||||||||||.
Sbjct 959 GCGAGTCCCAGACCCGGAACCAGCACCTGCAGGAGCAAGTGGCCATGCAGCGGCAGGTGCTGAAGGAGATGGAG 1032
Query 475 CAGCAGCTGCAGAGCTCACACCAGCTGACCGCGCGGCTCCGGGCGCAGATTGCCATGTACGAGTCAGAGCTGGA 548
||||||||.||||.|||.|||||||||||.|..|.|.|.|||||.||||||||||||||.|||.||||||||||
Sbjct 1033 CAGCAGCTACAGAACTCCCACCAGCTGACAGTCCAGTTGCGGGCTCAGATTGCCATGTATGAGGCAGAGCTGGA 1106
Query 549 GCGGGCCCATGGGCAGATGCTGGAGGAGATGCAGTCCCTGGAAGAGGACAAGAACCGGGCCATTGAGGAGGCCT 622
||||||.||.|||||||||||||||||||||||||||.||||.|||||.|||||||||||||||||||||||||
Sbjct 1107 GCGGGCACACGGGCAGATGCTGGAGGAGATGCAGTCCTTGGAGGAGGATAAGAACCGGGCCATTGAGGAGGCCT 1180
Query 623 TTGCCAGAGCCCAGGTGGAGATGAAGGCTGTGCACGAGAATCTAGCAGGCGTCCGGACCAACTTGCTGACCTTG 696
||||..|.||||||||||||||||||||.||.||||||||.||.|||||.|||.||||||||.|||||||..||
Sbjct 1181 TTGCACGGGCCCAGGTGGAGATGAAGGCAGTACACGAGAACCTGGCAGGTGTCAGGACCAACCTGCTGACGCTG 1254
Query 697 CAGCCGGCACTGCGGACCCTCACCAACGACTACAATGGGCTCAAGCGGCAGGTGCGCGTCTTCCCACTGCTGCT 770
|||||.||.|||.|||||||||||||||||||||||||||||||||||||||||||.|.||||||..|||||||
Sbjct 1255 CAGCCTGCGCTGAGGACCCTCACCAACGACTACAATGGGCTCAAGCGGCAGGTGCGGGGCTTCCCCTTGCTGCT 1328
Query 771 GCAGGAGGCCCTCAGGAGTGTCAAGGCCGAGATAGGCCAGGCCATCGAGGAGGTCAACAGCAACAACCAGGAGC 844
|||||||||.||||||||||||||.||.|||||.||||||||||||||||||||.||.||||||||||||||||
Sbjct 1329 GCAGGAGGCTCTCAGGAGTGTCAAAGCTGAGATCGGCCAGGCCATCGAGGAGGTTAATAGCAACAACCAGGAGC 1402
Query 845 TGCTGCGCAAGTACCGCCGCGAGCTGCAGCTGCGTAAGAAGTGCCACAATGAGCTCGTGCGGCTGAAAGGGAAC 918
||.||||||||||||||||.||.||.||||||||.|||||.|||||.||.|||||.||.||||||||.||.|||
Sbjct 1403 TGTTGCGCAAGTACCGCCGGGAACTACAGCTGCGCAAGAAATGCCATAACGAGCTGGTCCGGCTGAAGGGAAAC 1476
Query 919 ATCCGAGTGATTGCTCGTGTCCGGCCAGTCACCAAAGAGGATGGGGAAGGACCTGAGGCCACCAATGCTGTGAC 992
|||||.||||||||.||.|||||||||||||||||.||||||||.||||||||.|||||.||||||||||||||
Sbjct 1477 ATCCGGGTGATTGCCCGAGTCCGGCCAGTCACCAAGGAGGATGGAGAAGGACCCGAGGCAACCAATGCTGTGAC 1550
Query 993 TTTCGATGCCGACGACGACTCCATCATCCACCTGCTGCACAAGGGCAAGCCTGTGTCCTTCGAGCTGGACAAGG 1066
.||.||..|.||.||.|||||||||||||||||||||||||||||||||||.||||||||||||||||||||||
Sbjct 1551 CTTTGACCCTGATGATGACTCCATCATCCACCTGCTGCACAAGGGCAAGCCCGTGTCCTTCGAGCTGGACAAGG 1624
Query 1067 TCTTCTCCCCACAGGCCTCGCAGCAGGACGTGTTCCAGGAGGTGCAGGCCCTGGTCACCTCTTGCATTGATGGC 1140
||||||||||...|||.||.||||||||||||||||||||||||||||||||..|.|||||.|||||.||||||
Sbjct 1625 TCTTCTCCCCGTGGGCTTCCCAGCAGGACGTGTTCCAGGAGGTGCAGGCCCTCATTACCTCCTGCATCGATGGC 1698
Query 1141 TTCAATGTCTGCATCTTTGCGTACGGCCAGACGGGCGCCGGCAAGACGTACACGATGGAGGGGACCGCTGAGAA 1214
|||||||||||.||||||||.|||||||||||.||.|||||||||||.||.||.|||||||||||..|.|||||
Sbjct 1699 TTCAATGTCTGTATCTTTGCTTACGGCCAGACAGGTGCCGGCAAGACATATACAATGGAGGGGACTCCCGAGAA 1772
Query 1215 CCCAGGTATCAACCAGCGGGCCCTGCAGCTGCTCTTCTCCGAGGTGCAGGAGAAGGCGTCTGACTGGGAGTACA 1288
|||.||.||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||.||||||
Sbjct 1773 CCCGGGCATCAACCAGCGGGCCCTGCAGCTGCTCTTCTCGGAGGTGCAGGAGAAGGCGTCTGACTGGCAGTACA 1846
Query 1289 CCATCACCGTCAGCGCTGCGGAGATCTACAATGAGGTCCTCAGGGACCTGCTAGGGAAAGAGCCTCAGGAAAAA 1362
.|||||||||||||||.||.|||||.||||||||.|||||||||||||||||.|||||||||||||||||.||.
Sbjct 1847 ACATCACCGTCAGCGCAGCTGAGATTTACAATGAAGTCCTCAGGGACCTGCTGGGGAAAGAGCCTCAGGAGAAG 1920
Query 1363 CTGGAGATCCGGCTGTGCCCAGACGGCAGTGGGCAGCTGTATGTACCAGGGCTGACTGAGTTCCAAGTGCAGAG 1436
|||||||||||.||||||||.||.|||||||||||.||||||||.||||||||||||||||||||.||||||||
Sbjct 1921 CTGGAGATCCGACTGTGCCCGGATGGCAGTGGGCAACTGTATGTGCCAGGGCTGACTGAGTTCCAGGTGCAGAG 1994
Query 1437 CGTGGACGACATCAACAAGGTGTTTGAGTTTGGCCACACTAATCGCACGACCGAGTTCACCAACCTGAACGAGC 1510
||||||.|||||||||||||||||||||||||||.|||..||.|||||.|||||||||||||||||||||||.|
Sbjct 1995 CGTGGATGACATCAACAAGGTGTTTGAGTTTGGCTACAACAACCGCACCACCGAGTTCACCAACCTGAACGAAC 2068
Query 1511 ACAGCTCCCGCTCGCACGCACTGCTCATCGTGACGGTGCGAGGCGTGGACTGCAGCACAGGCCTCCGCACCACG 1584
|||||||||||||.|||||.||||||||||||||.|||.||||.|||||.||||||||||||||||||||||||
Sbjct 2069 ACAGCTCCCGCTCCCACGCTCTGCTCATCGTGACAGTGAGAGGTGTGGATTGCAGCACAGGCCTCCGCACCACG 2142
Query 1585 GGGAAGCTGAACCTGGTGGACTTGGCTGGCTCGGAGCGCGTGGGCAAGTCGGGGGCCGAGGGCAGCCGCCTGCG 1658
|||||||||||||||||||||.|||||||.||.|||||.|||||||||||||||||.|||||||.|||||||||
Sbjct 2143 GGGAAGCTGAACCTGGTGGACCTGGCTGGTTCAGAGCGTGTGGGCAAGTCGGGGGCTGAGGGCAACCGCCTGCG 2216
Query 1659 GGAGGCGCAGCACATCAACAAGTCGCTGTCGGCTCTGGGGGACGTCATTGCTGCCCTGCGCTCCCGCCAGGGCC 1732
.|||||.|||||||||||||.|||.||.||.||.||||||||||||||||||||||||||.||.||.||.||||
Sbjct 2217 AGAGGCACAGCACATCAACAGGTCACTATCCGCCCTGGGGGACGTCATTGCTGCCCTGCGTTCTCGACAAGGCC 2290
Query 1733 ACGTGCCCTTCCGCAACTCCAAGCTCACCTACCTGCTGCAGGATTCGCTTAGTGGTGACAGCAAGACCCTCATG 1806
|.||||||||||||||.|||||.||||||||||||||||||||.||.||.||||||||||||||||||||.|||
Sbjct 2291 ATGTGCCCTTCCGCAATTCCAAACTCACCTACCTGCTGCAGGACTCACTCAGTGGTGACAGCAAGACCCTTATG 2364
Query 1807 GTGGTACAGGTGTCCCCCGTGGAGAAGAACACTAGCGAGACGCTCTATTCCCTCAAGTTTGCTGAGAGGGTGCG 1880
|||||||||||||||||.||||||||||||||.||||||||.||.||.|||||||..||||||||||||||.||
Sbjct 2365 GTGGTACAGGTGTCCCCAGTGGAGAAGAACACCAGCGAGACTCTGTACTCCCTCAGATTTGCTGAGAGGGTTCG 2438
Query 1881 CTCTGTGGAGCTGGGGCCTGGGCTACGCAGGGCAGAGCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTGGG 1954
||||||||||.||||.||||||...|||.|..|||||||.||.||||||||||||||||||||.||.|||||||
Sbjct 2439 CTCTGTGGAGTTGGGCCCTGGGTCCCGCCGCACAGAGCTGGGTTCCTGGTCAAGCCAGGAGCACCTGGAGTGGG 2512
Query 1955 AGCCGGCTTGTCAGACGCCACAGCC---------------CTCGGCC--------------------------- 1986
||||||||||.|||||.|||||||| |||.|||
Sbjct 2513 AGCCGGCTTGCCAGACACCACAGCCTACAGCACGAGCCCACTCTGCCCCTGGCTCTGGGACCAGTAGCCGCCCA 2586
Query 1987 ------------------------------------------------------ 1986
Sbjct 2587 GGTTCCATCCGAAGGAAACTGCAGCCGTCAGGGAAGTTGAGGCCAGTGCCTGTG 2640
