Nucleotide Global Alignment
Description
- Query:
- TRCN0000481530
- Subject:
- NR_157409.2
- Aligned Length:
- 3940
- Identities:
- 418
- Gaps:
- 3484
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATTGACAGAAGCGTCAATTCCTGGGAGTAGTTCGTTGGTTTTCTTTCCCCTCATCCTTTTGCCTGCTCCCGGCG 74
Query 1 ----------------------ATGAGCTCCCAGAAAGGCAACGTGGCTCGTTCCAGACCTCAGAAGCACCAGA 52
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AGGGGTGGCTTTGATTTCGGCGATGAGCTCCCAGAAAGGCAACGTGGCTCGTTCCAGACCTCAGAAGCACCAGA 148
Query 53 ATACGTTTAGCTTCAAAAATGACAAGTTCGATAAAAGTGTGCAGACCAAGAAAATTAATGCAAAACTTCATGAT 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ATACGTTTAGCTTCAAAAATGACAAGTTCGATAAAAGTGTGCAGACCAAGAAAATTAATGCAAAACTTCATGAT 222
Query 127 GGAGTATGTCAGCGCTGTAAAGAAGTTCTTGAGTGGCGTGTAAAATACAGCAAATACAAACCATTATCAAAACC 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGAGTATGTCAGCGCTGTAAAGAAGTTCTTGAGTGGCGTGTAAAATACAGCAAATACAAACCATTATCAAAACC 296
Query 201 TAAAAAGTGTGTTAAATGTTTACAAAAGACAGTGAAGGATTCTTATCACATAATGTGCAGGCCATGTGCCTGTG 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TAAAAAGTGTGTTAAATGTTTACAAAAGACAGTGAAGGATTCTTATCACATAATGTGCAGGCCATGTGCCTGTG 370
Query 275 AACTTGAAGTTTGCGCAAAATGTGGAAAGAAAGAAGACATTGTTATTCC--GTTGAATAAAGAAAC---AGAA- 342
||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||.| ||||
Sbjct 371 AACTTGAAGTTTGCGCAAAATGTGGAAAGAAAGAAGACATTGTTATTCCGAGTTG------GAAGCTTTAGAAG 438
Query 343 -------AAAATAGAACATACTGAAAATAATC-------TAAGTTCCAACC---ATAGAAGA------------ 387
||...||.|...|||| || |.||..||.||| ||.||.||
Sbjct 439 GAGTTTCAACTCAGGAGTCACTG-------TCCCTTGAGTGAGACCCCACCTGTATGGAGGAGCTGGTGATTCT 505
Query 388 --AGCTGCAGAAGAAATGAAGAA------------------------AGTGATG----ATGATTTAGATT---- 427
|.|||||....|.||.|.|.| ||||..| |.|||.|.|..|
Sbjct 506 ATATCTGCACTTAACATTATGGAGTCTCCCTCTGTTGCCCAGGCTGGAGTGCAGTGGCAGGATCTTGGCTCACC 579
Query 428 ----------------TTGAT--ATTGATT---------------------TAG--AAGAC-ACAGGAGGAGAC 459
|||.| |.||||| ||| ..||| |||||.|.|.||
Sbjct 580 ACAACCTCCGCCTCCCTTGTTCAAGTGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGACTACAGGCGCACAC 653
Query 460 CATCAAATG-------AAT------------------------------------------------------- 471
||.| ||| |||
Sbjct 654 CACC--ATGCCCAGCTAATCTTTGTATTTTTAGTAGAGATGGGGTTTCACTATGTTGGCCAGGCCGGTCTCGAA 725
Query 472 -------------------------------------------------------------------------- 471
Sbjct 726 CTCCTGACCTCATGATCTGCCTGCCTCAACCTCCCAAAGTGCTGGAATTACAGGTGTGAGCCATCATGCCTGGC 799
Query 472 -------------------------------------------------------------------------- 471
Sbjct 800 CTAATTTGTATATTTCTAATGACTCATGATGTTGACTGAGCATCTTTTCTTTTCTTTTCTTTTTTTTTTTCCTT 873
Query 472 -------------------------------------------------------------------------- 471
Sbjct 874 GTTTTTTGAGATGGAGTCTTGCTCTATAGCCCGGGCTGGAGTGCAGTGGCACCATTTCAGCTCAATGCAACCTC 947
Query 472 -------------------------------------------------------------------------- 471
Sbjct 948 TGCCTCCTAGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCACACACCACCATGC 1021
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1022 CCAGCTAATTTTTGTATTTTTAGTAGAAACAGGTTTTCACAATGTTGGCCAGGATGGTCTCCATCTACTGACCT 1095
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1096 TGTGATCCGCCCCCCTAGGCCTCCCAAAGTGCTGGGCTTACAGGCATGAGCCACTGCACCCAGCCGACTGAACA 1169
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1170 TCTTTTCATGTGTTTATTAGCCAATCCTATATCTTCACTGGTGAAATGTCTATTCAGATGTGTTGCCCATTTTA 1243
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1244 AAAATTGGGTTGTTTTCTTACCATTGAGTTATGAGTCTTTTATATATATTCTAGATACAAGTCCTTTATCAGAT 1317
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1318 ATAATTTGGAAATATTTTCTCGCTGTCTGTAATGTGTTATACATCAATTTTGAGATATCCTTCACATTAAGAAA 1391
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1392 CTAACGGTGTGGATAATAATCCTGGTATTGACAGAGGTTTGGACTCCTGAAGCCTGAAAGTCTATCTGCTGCCA 1465
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1466 CGCCTGGGCACATACTGCATCATTTACAAAACTGTAGAGCACCTGTTGTGTGTGCAGTTGTGATTTCTTATAGA 1539
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1540 TTTTTAGAATTGGAAGGCATGTAAAGAACACGTAATCTGGTACATTGCTTCAGTAGGTAAGTCAGTATGAACTT 1613
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1614 CTAAGAATTTTTGTTTTCTTCTGTATTGGGTCTATTGTGGGTATGTCCAACGTGACAGGGGAGGTAAGGGAAGT 1687
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1688 GGCATCCCCTGAGATAGTGACTGAAATGGCTTTCATCATCTTTAAGTCAAAGTGAGATGCCAGTAATAGGATAT 1761
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1762 ATGTATGTATGTACTTGTGTCTCTGTATGTATGTAAATAAACAAACATGCTGGAAGGAGGAGGTGATTCAATCA 1835
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1836 GGGACTTTGTGAAAGAAAAAAAGAATAACTGGACCTTCCTTTAATGATGAAAACTGTTTATACAGCAAACCATC 1909
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1910 AAAGCCAAAATGTGAATTTTGGTATTAGCCCGATTTTTCCTAAGAAACTGTTGATGTAACCACTGTAGTTGCAG 1983
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1984 AGATCGTTTTGGTATATTCTAGACCCTCTTTGTTTTGTTCTGTTTGGGGTTTCTTCCCCCTCAAGTTGCTCTTG 2057
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2058 TCCACCACTAGACTGGCTGCCTTTTATTCCATAGCAGACAGTCCTTAAGTCTTTGCATATGTCCTTATTCAAAA 2131
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2132 ATTAATCTTCATCAGTTTTTTTCTGCAGAAAACAGTTTTTTAAATATCTTACATGAGAATGCTCTGCACCTGCA 2205
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2206 ATCTCTGGTTGATGCAGTTTCCTTTCTCTCTTCTCTGTTCCCATTGGTAGAATAAATCTGCTCCTTCTTAAATC 2279
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2280 CTGAGCTGAAAATGTCCACACTTCCCAGAAGTGTACTTTAGAATCACCTGTAACATGTATTTAAAATACAGATT 2353
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2354 CCCCAGCTCCACGGGCAAAGCTCTCCTGCCATGTGACACCCTGATACAGTTCAGGGAGCCACTAAGGCAGGCCA 2427
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2428 AAATGGCTCAGCAGGCAAAGGTCCAAGCTGCCAGGGTAGTGTGTCATTACAGCATGCTTAGCATAGCTAGGAGG 2501
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2502 ACAGGCTCACACCCAGCCCCACAGCTGTTGCGCTACAGACTCAGGCACAGGGCTGTCTAACTGGCAGATGTGGG 2575
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2576 CCACAACTGTTGGAGACAAGCCAGCCATATTTGGGAAAATCTTATTGTAAGGGGCAAGTGTGAGTGAGATTTAG 2649
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2650 GAGTCATGGGAAAATACACCAACACAGTAAATCTTGTGTTATAGGAGAGATGTGGAAGAAAGAGATAAACTACT 2723
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2724 GGCCAGGGTGTCTCCTGACTGGGTGACTTGCCACCACATGGGCCAGGCAGGTTGCGGCAGCTCTGCCTTTGGGA 2797
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2798 GGTGGCTGGAGGAGGGGAGGAGAGAGAGGCATGATGAAGACAGATGCACCCTTTCCTGAGCAGGGGTTAACATT 2871
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2872 CAGGGTGCCGAAAGGAATTCCACAGCCTGTTTCCCATCTCTCTTGTCCTCATCAAGTACTGGTCCTCGTGTATG 2945
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2946 TGTTCTGCTTCCGCTTTCTCAGGATGTTTACGTTTTTGCAAATACGTTTATGGAAAAGAGTTACCTCACCCACC 3019
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3020 TCTCCAAACATCTATTTGTTTTACATTTTTATTGCGGGGGAGTGATCTCTTTACATAGCTTCAAATGGCATAAC 3093
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3094 ATTCAGCAGTATCCAAGCTTAGATATATCTGATGAGAGGAAAGTAATTGTGAGGCCTTTGTTCTAGTTACAACT 3167
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3168 TTGTCACTATCTGACTCCATGACTCCAGCAAATTGCTTCAACTGTCTGGCCTGCAGTTTTTTTCTTGCGTTAAA 3241
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3242 TAACAGACTTAGTCTAGATCGGTGGTTCTTATCATGTGGTTTCTGGACTAGCAGCATCAATATTACCTGGGAAA 3315
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3316 CTTGTTAGAAATGCAAATTCTTGGGCTCTGCCCTAGACCTACTGAAACATACTCTGTGGGCGGGGCCCAGCAAT 3389
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3390 CTGTGTTTGAAACGCGATTCTGATTATTTGACAAAAGTTTGCAAACCACTGGTCTAGATAAGTAGCTCTTAGCC 3463
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3464 TTGGCTGCACATTAAAATCATCTGGGCAACTTTTATAACCTACCAATCCTGGCCTCTTCCTCCAAAGATTCTGA 3537
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3538 CTTAAATGGTTTCAGATGGGGACCATTGTTATGCGGTTATAGCCGACGCCTAGGTGCTACCTGAGGTCTTCAAA 3611
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3612 GCTAAAGGTCAGTGTTTCCCAGCCGTAAATGCATACCTCTAGACCTGGCCTTCTCAAGCCACTAGGTGTTGCTA 3685
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3686 TAATAGAGAAGAAAAGGCATTTTCAGAACCGTCTTTGGATATGGATGAGGAGGAGGAAAATGTATTTCTTAGCT 3759
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3760 TCTGATAAGAGATTATTTTGTTATTTTAATCTGAGTGCAATTTGCTAAATATTCATTTGCAACTTGTTAAATTT 3833
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3834 ATTCAAAGAAATTAAATGCCCATAAGTGACAGAAAGAATAAAGAATTGTGATATATATTTACAATAAAATACTC 3907
Query 472 ------------------ 471
Sbjct 3908 TTTAGCAATAAAAAGAAA 3925
