Nucleotide Global Alignment

Description

Query:
TRCN0000481546
Subject:
XR_001738776.1
Aligned Length:
3008
Identities:
1231
Gaps:
1777

Alignment

Query    1  -------------------------------------------------------------ATGAGGCTGGCGC  13
                                                                         |||||||||||||
Sbjct    1  ACTCGGCAGAGGCGCGGGGAAACCTGGCGTACTGGCTGTGGCTTCTCTAGCGGGACTCGGCATGAGGCTGGCGC  74

Query   14  GGCTGCTTCGCGGAGCCGCCTTGGCCGGCCCGGGCCCGGGGCTGCGCGCCGCCGGCTTCAGCCGCAGCTTCAGC  87
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GGCTGCTTCGCGGAGCCGCCTTGGCCGGCCCGGGCCCGGGGCTGCGCGCCGCCGGCTTCAGCCGCAGCTTCAGC  148

Query   88  TCGGACTCGGGCTCCAGCCCGGCGTCCGAGCGCGGCGTTCCGGGCCAGGTGGACTTCTACGCGCGCTTCTCGCC  161
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TCGGACTCGGGCTCCAGCCCGGCGTCCGAGCGCGGCGTTCCGGGCCAGGTGGACTTCTACGCGCGCTTCTCGCC  222

Query  162  GTCCCCGCTCTCCATGAAGCAGTTCCTGGACTTCGGATCAGTGAATGCTTGTGAAAAGACCTCATTTATGTTTC  235
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GTCCCCGCTCTCCATGAAGCAGTTCCTGGACTTCGGATCAGTGAATGCTTGTGAAAAGACCTCATTTATGTTTC  296

Query  236  TGCGGCAAGAGTTGCCTGTCAGACTGGCAAATATAATGAAAGAAATAAGTCTCCTTCCAGATAATCTTCTCAGG  309
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TGCGGCAAGAGTTGCCTGTCAGACTGGCAAATATAATGAAAGAAATAAGTCTCCTTCCAGATAATCTTCTCAGG  370

Query  310  ACACCATCCGTTCAATTGGTACAAAGCTGGTATATCCAGAGTCTTCAGGAGCTTCTTGATTTTAAGGACAAAAG  383
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ACACCATCCGTTCAATTGGTACAAAGCTGGTATATCCAGAGTCTTCAGGAGCTTCTTGATTTTAAGGACAAAAG  444

Query  384  TGCTGAGGATGCTAAAGCTATTTATGA-----------------------------------------------  410
            |||||||||||||||||||||||||||                                               
Sbjct  445  TGCTGAGGATGCTAAAGCTATTTATGAAAGGCCTAGAAGAACATGGTTGCAGGTCTCTAGTTTATGCTGTATGG  518

Query  411  -------------CTTTACAGATACTGTGATACGGATCAGAAACCGACACAATGATGTCATTCCCACAATGGCC  471
                         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CCTGCAAGATGATCTTTACAGATACTGTGATACGGATCAGAAACCGACACAATGATGTCATTCCCACAATGGCC  592

Query  472  CAGGGTGTGATTGAATACAAGGAGAGCTTTGGGGTGGATCCTGTCACCAGCCAGAATGTTCAGTACTTTTTGGA  545
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CAGGGTGTGATTGAATACAAGGAGAGCTTTGGGGTGGATCCTGTCACCAGCCAGAATGTTCAGTACTTTTTGGA  666

Query  546  TCGATTCTACATGAGTCGCATTTCAATTAGAATGTTACTCAATCAGCACTCTTTATTGTTTGGTGGAAAAGGCA  619
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TCGATTCTACATGAGTCGCATTTCAATTAGAATGTTACTCAATCAGCACTCTTTATTGTTTGGTGGAAAAGGCA  740

Query  620  AAGGAAGTCCATCTCATCGAAAACACATTGGAAGCATAAATCCAAACTGCAATGTACTTGAAGTTATTAAAGAT  693
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AAGGAAGTCCATCTCATCGAAAACACATTGGAAGCATAAATCCAAACTGCAATGTACTTGAAGTTATTAAAGAT  814

Query  694  GGCTATGAAAATGCTAGGCGTCTGTGTGATTTGTATTATATTAACTCTCCCGAACTAGAACTTGAAGAACTAAA  767
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GGCTATGAAAATGCTAGGCGTCTGTGTGATTTGTATTATATTAACTCTCCCGAACTAGAACTTGAAGAACTAAA  888

Query  768  TGCAAAATCACCAGGACAGCCAATACAAGTGGTTTATGTACCATCCCATCTCTATCACATGGTGTTTGAACTTT  841
            |                                                                         
Sbjct  889  T-------------------------------------------------------------------------  889

Query  842  TCAAGAATGCAATGAGAGCCACTATGGAACACCATGCCAACAGAGGTGTTTACCCCCCTATTCAAGTTCATGTC  915
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  890  ----GAATGCAATGAGAGCCACTATGGAACACCATGCCAACAGAGGTGTTTACCCCCCTATTCAAGTTCATGTC  959

Query  916  ACGCTGGGTAATGAGGATTTGACTGTGAAGATGAGTGACCGAGGAGGTGGCGTTCCTTTGAGGAAAATTGACAG  989
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  960  ACGCTGGGTAATGAGGATTTGACTGTGAAGATGAGTGACCGAGGAGGTGGCGTTCCTTTGAGGAAAATTGACAG  1033

Query  990  ACTTTTCAACTACATGTATTCAACTGCACCAAGACCTCGTGTTGAGACCTCCCGCGCAGTGCCTCTGGCTGGTT  1063
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1034  ACTTTTCAACTACATGTATTCAACTGCACCAAGACCTCGTGTTGAGACCTCCCGCGCAGTGCCTCTGGCTGGTT  1107

Query 1064  TTGGTTATGGATTGCCCATATCACGTCTTTACGCACAATACTTCCAAGGAGACCTGAAGCTGTATTCCCTAGAG  1137
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1108  TTGGTTATGGATTGCCCATATCACGTCTTTACGCACAATACTTCCAAGGAGACCTGAAGCTGTATTCCCTAGAG  1181

Query 1138  GGTTACGGGACAGATGCAGTTATCTACATTAAGGCTCTGTCAACAGACTCAATAGAAAGACTCCCAGTGTATAA  1211
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1182  GGTTACGGGACAGATGCAGTTATCTACATTAAGGCTCTGTCAACAGACTCAATAGAAAGACTCCCAGTGTATAA  1255

Query 1212  CAAAGCTGCCTGGAAGCATTACAACACCAACCACGAGGCTGATGACTGGTGCGTCCCCAGCAGAGAACCCAAAG  1285
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1256  CAAAGCTGCCTGGAAGCATTACAACACCAACCACGAGGCTGATGACTGGTGCGTCCCCAGCAGAGAACCCAAAG  1329

Query 1286  ACATGACGACGTTCCGCAGTGCC---------------------------------------------------  1308
            |||||||||||||||||||||||                                                   
Sbjct 1330  ACATGACGACGTTCCGCAGTGCCTAGACACACTTGGGACATCGGAAAATCCAAATGTGGCTTTTGTATTAAATT  1403

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 1404  TGGAAGTGTGGCCCAGAGTTGCTCAGAATTGGAGCAGAGCCTGAGACGTATCTGCAGATCCTGTCATCAGCTGG  1477

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 1478  CAAGTCCAGGAGACTGTGTCATTTAGAGACTGTGTTGTTAGTTATCCCTCAACATCTTCTAAGGTGGCAGGAAA  1551

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 1552  TAATATTGGAAATAACATTTTAAAGTAAAAATTTTAAAGTTTAAAGAAGAGTTTTGCCACTTAAACAGGGGAGC  1625

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 1626  TTTGTCTGGAAAATACACTGAGTTGAAACACTTCATCCTTGGAAGGATTATATAAGATGAACAGTTGTGATAAA  1699

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 1700  TGTGTAGATTAGAGGGATGTGAATGGGCAGTTAGTCCAGTGCCCTCATTTAAGAGGCCAAGATCCTGATTCAGA  1773

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 1774  GGAGGCATCCTTTGCCCAGAGCTGCTTAGCTAATCTGACCAAATGTTGGGAAAAATGTCTCACCTAACCCACTA  1847

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 1848  TTCCTTAATTATGGATTTTGTGAAAAACAATAGAACATGTTAATGAGTAATTTATATTAGTTCGATGTATTACA  1921

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 1922  ATTTTTTAGCTTTAAATTACAGTTTTCTTATAATGTTGAAATGTTTTAGAATCCTTTGAATCTAAGTATTTGTT  1995

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 1996  TCCTAAATGAAACATTTGTACAACATTTGATGTTTTTACTTATGAAATATTCTCCTCCCCCAAGAAAATTTAAA  2069

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 2070  CTTTTTCTCTCTATTTAAAAGCTAAGAAATGTTTTAAAGGAAAAATGAAATTATCTTCCTTTAGCTTATTTTTA  2143

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 2144  AGGTAAAACAGCTTTTTACTCTGTTATTGTGGTAATGGACAGAATATTACATACAAAAATATTCTGGGAGAGCT  2217

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 2218  TTTTCCTAGTTGGTTTTAAATCATTGTGCCACCTGAAAGGTTTTTAGATTTTATAGGAGCTAATTTGTCCACCA  2291

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 2292  GCATTAATGTAACACAGTGTAGTTATGAAAATATATTGAAGGACAGGAAGTGGACACGAAGTGATTTTTGTAAC  2365

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 2366  CTGAGCAGTTAATGAATGTGCCAACATTTTCTAGGAAGGGACAGCAAGAATATTCTGCTCTGTAGTTAAAATAC  2439

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 2440  TGGCTGGCTTTTGATGTCTTCATGCTTAATTGTGATCACTTTCTTGCACTGTGATGTTTTTACGTGAATATGTT  2513

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 2514  GAAGTAGAAGTCTACCATATTATTTTATAAAATGTTTTCTGTATGGCAATAAACTGAAAACATGGATCAACCCT  2587

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 2588  TCTTTTGAAAATAAACTGAGTCAATTTAGCCTTTTAAAAATATAGTCATCTCTTTTAAATAGAATCCTCTTCCA  2661

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 2662  CCATCAAGGCTCAACATTTTGTAAGCATCCAAAAAATTGGTAATTAGGGGGCTTGCACTAAATTTCACTATCTT  2735

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 2736  CAGTAGAGAGGAACTGTTTGGAACTTAGATTTCCAATGTGTATATTCTAATGGAGAAAGCAAGAGGTAGAGTTT  2809

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 2810  GTATGTTTGACTTACCTTAGATTTTTATTTTCCATACATACTGCAAATGATTGACTTGTTGCATAAATGAAGAT  2883

Query 1309  ------------------------------------------------  1308
                                                            
Sbjct 2884  CTTCTGTTGTGTGCTTTTCAAACACTGTAAATAAATTTGAAATTTGAA  2931

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