Nucleotide Global Alignment

Description

• Query: TRCN0000487688
• Subject: NM_001313981.1
• Aligned Length: 1254
• Identities: 736
• Gaps: 447

Alignment

Query    1  ATGCCGCAGCTGGACTCCGGCGGGGGCGGCGCGGGCGGCGGCGACGACCTCGGCGCGCCGGACGAGCTGCTGGC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CTTCCAGGATGAAGGCGAGGAGCAGGACGACAAGAGCCGCGACAGCGCCGCCGGTCCCGAGCGCGACCTGGCCG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  AGCTCAAGTCGTCGCTCGTGAACGAGTCCGAGGGCGCGGCCGGCGGCGCAGGGATCCCGGGGGTCCCGGGGGCC  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  GGCGCCGGGGCCCGCGGCGAGGCCGAGGCTCTCGGGCGGGAACACGCTGCGCAGAGACTCTTCCCGGACAAACT  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  TCCAGAGCCCCTGGAGGACGGCCTGAAGGCCCCGGAGTGCACCAGCGGCATGTACAAAGAGACCGTCTACTCCG  370
                                                             ||||||||||||||.||||||||.|
Sbjct    1  -------------------------------------------------ATGTACAAAGAGACTGTCTACTCTG  25

Query  371  CCTTCAATCTGCTCATGCATTACCCACCCCCCTCGGGAGCAGGGCAGCACCCCCAGCCGCAGCCCCCGCTGC--  442
            ||||||||||||||||||..||||||||..||||.||||||||||||||.||.|||||.||.||||||||||  
Sbjct   26  CCTTCAATCTGCTCATGCCCTACCCACCGGCCTCCGGAGCAGGGCAGCATCCGCAGCCTCAACCCCCGCTGCAT  99

Query  443  -ACAAGGCCAATCAGCCCCCCCACGGTGTCCCCCAACTCTCT---CTCTACGAACATTTCAACAGCCCACATCC  512
             |||||.||...|||||.||.||.||.||||||||.||.|||   ||||||||||||||||.|||.|||||.||
Sbjct  100  AACAAGCCCGGCCAGCCTCCACATGGCGTCCCCCAGCTTTCTCCACTCTACGAACATTTCAGCAGTCCACACCC  173

Query  513  CACCCCTGCACCTGCGGACATCAGCCAGAAGCA---AGTTCACAGGCCTCTGCAGACCCCTGACCTCTCTGGCT  583
            ||||||||||||.||||||||||||||||||||   ||||||||||||.|||||||||||.||.||||||||.|
Sbjct  174  CACCCCTGCACCAGCGGACATCAGCCAGAAGCAAGGAGTTCACAGGCCGCTGCAGACCCCCGATCTCTCTGGAT  247

Query  584  TCTACTCCCTGACCTCAGGCAGCATGGGGCAGCTCCCCCACACTGTGAGCT-----------------------  634
            |.||.||.||||||||||||||||||||.|||||||||||.||||||||||                       
Sbjct  248  TTTATTCTCTGACCTCAGGCAGCATGGGACAGCTCCCCCATACTGTGAGCTGGCCCAGTCCTCCTCTCTACCCC  321

Query  635  ----------------------------------------------------------------------GGTT  638
                                                                                  ||||
Sbjct  322  CTGTCCCCTTCCTGCGGATATAGACAGCACTTCCCTGCCCCCACTGCAGCCCCTGGCGCCCCCTATCCCAGGTT  395

Query  639  CACCCACCCATCCTTGATGCTAGGTTCTGGTGTACCTGGTCACCCAGCAGCCATCCCCCACCCGGCCATTGTGC  712
            |||||||||||||||||||||.||.||||||||||||||.|||||||||||||||||.||||||||||||||||
Sbjct  396  CACCCACCCATCCTTGATGCTGGGATCTGGTGTACCTGGACACCCAGCAGCCATCCCTCACCCGGCCATTGTGC  469

Query  713  CCCCCTCAGGGAAGCAGGAGCTGCAGCCCTTCGACCGCAACCTGAAGACACAAGCAGAGTCCAAGGCAGAGAAG  786
            ||.|||||||||||||||||||||||||.|..||..|.||||||||.|||||.|||||..||||||||||||||
Sbjct  470  CCTCCTCAGGGAAGCAGGAGCTGCAGCCATATGATAGAAACCTGAAAACACAGGCAGAACCCAAGGCAGAGAAG  543

Query  787  GAGGCCAAGAAGCCAACCATCAAGAAGCCCCTCAATGCCTTCATGCTGTACATGAAGGAGATGAGAGCCAAGGT  860
            |||||.|||||||||..|||||||||.|||||||||||.||||||||.||||||||||||||||||||||||||
Sbjct  544  GAGGCTAAGAAGCCAGTCATCAAGAAACCCCTCAATGCGTTCATGCTTTACATGAAGGAGATGAGAGCCAAGGT  617

Query  861  CATTGCAGAGTGCACACTTAAGGAGAGCGCTGCCATCAACCAGATCCTGGGCCGCAGGTGGCACGCGCTGTCGC  934
            ||||||.|||||||||||.||||||||||||||||||||||||||||||||.|||||||||||.||.||.||.|
Sbjct  618  CATTGCTGAGTGCACACTCAAGGAGAGCGCTGCCATCAACCAGATCCTGGGTCGCAGGTGGCATGCACTATCTC  691

Query  935  GAGAAGAGCAGGCCAAGTACTATGAGCTGGCCCGCAAGGAGAGGCAGCTGCACATGCAGCTATACCCAGGCTGG  1008
            |||||||||||||||||||||||||.||||||||||||||.||||||||||||||||||||||||||.||||||
Sbjct  692  GAGAAGAGCAGGCCAAGTACTATGAACTGGCCCGCAAGGAAAGGCAGCTGCACATGCAGCTATACCCGGGCTGG  765

Query 1009  TCAGCGCGGGACAACTACGGGAAGAAGAAGAGGCGGTCGAGGGAAAAGCACCAAGAATCCACCACAGGAGGAAA  1082
            ||.||||||||.||||||||.|||||||||||||||||.||||||||.||.|||||||||||||||||||||||
Sbjct  766  TCCGCGCGGGATAACTACGGAAAGAAGAAGAGGCGGTCAAGGGAAAAACATCAAGAATCCACCACAGGAGGAAA  839

Query 1083  AAGAAATGCATTCGGTACTTACCCGGAGAAGGCCGCTGCCCCAGCCCCGTTCCTTCCGATGACAGTGCTC  1152
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  840  AAGAAATGCATTCGGTACTTACCCGGAGAAGGCCGCTGCCCCAGCCCCGTTCCTTCCGATGACAGTGCTC  909