Nucleotide Global Alignment

Description

• Query: TRCN0000487695
• Subject: XM_006505543.3
• Aligned Length: 1510
• Identities: 1041
• Gaps: 272

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAATGTGTTCCGAAGGTTTCCCGGTGGCTCATGGCATCCTCCAAAGTCCTGCCTGCGAGCTGTTCCTGACCA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGAAAACCCGCGGAGCCTGACTCTGAAATCCAGTCCCGATGAAGAGGAGGTGATATTCATGTGTCCTGGCTCAC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  ACGTGAAGCAGAGGGCTTCTTGGAGTTGGTTCTTCCCTTTCCCCTTTATTCAGTTCTGGCAATGGAACTCAAGT  222

Query    1  ------------------------------------ATGGTTTTTGCTCACAGAATGGATAACAGCAAGCCACA  38
                                                |||||||||||||||||||||||||||..|.||||.|.
Sbjct  223  GTCCAGGCTTTCAGAACTAAGTGGAAAAGAGTGACTATGGTTTTTGCTCACAGAATGGATAACGACCAGCCGCC  296

Query   39  TTTGATTATTCCTACACTTCTGGTGCCCCTCCAAAACCGCAGCTGCACTGAAACAGC-----CACACCT-CTGC  106
            |.||.|.|.|.|.||.||.|||||||||||.||.|||.||||||||.|.|||.||||     |   ||| ||||
Sbjct  297  TGTGGTGACTGCCACCCTGCTGGTGCCCCTTCAGAACAGCAGCTGCGCGGAAGCAGCTGAGGC---CCTGCTGC  367

Query  107  CAAGCCAATACCTGATGGAATTAAGTGAGGAGCACAGTTGGATGAGCAACCAAACAGACCTTCACTATGTGCTG  180
            |   |||...||||||||.|||...||||||||||||.||||||||||||...|||||.|||||.||.|.||||
Sbjct  368  C---CCATGGCCTGATGGGATTGCATGAGGAGCACAGCTGGATGAGCAACAGGACAGAGCTTCAGTACGAGCTG  438

Query  181  AAACCCGGGGAAGTGGCCACAGCCAGCATCTTCTTTGG-GATTCTGTGGTTGTTTTCTATCTTCGGCAATTCCC  253
            ||.||.||.||.||||||||.||||||||||||||||| |.|| ||||||||||.||.|||||.||||||||||
Sbjct  439  AACCCTGGAGAGGTGGCCACCGCCAGCATCTTCTTTGGCGCTT-TGTGGTTGTTCTCCATCTTTGGCAATTCCC  511

Query  254  TGGTTTGTTTGGTCATCCATAGGAGTAGGAGGACTCAGTCTACCACCAACTACTTTGTGGTCTCCATGGCATGT  327
            ||||.|||.||||||||||..||||..|||||||||||||.||||||||||||||.|||||.||||||||.|||
Sbjct  512  TGGTATGTCTGGTCATCCACCGGAGCCGGAGGACTCAGTCCACCACCAACTACTTCGTGGTGTCCATGGCGTGT  585

Query  328  GCTGACCTTCTCATCAGCGTTGCCAGCACGCCTTTCGTCCTGCTCCAGTTCACCACTGGAAGGTGGACGCTGGG  401
            ||||||||||||||||||||.|||||||||||.||.|||.||||.|||||||||||.||.||||||||.|||||
Sbjct  586  GCTGACCTTCTCATCAGCGTGGCCAGCACGCCGTTTGTCGTGCTGCAGTTCACCACCGGGAGGTGGACCCTGGG  659

Query  402  TAGTGCAACGTGCAAGGTTGTGCGATATTTTCAATATCTCACTCCAGGTGTCCAGATCTACGTTCTCCTCTCCA  475
            |||.||.|.|||||||||.||.||.||.||.||.||.|||||.||.||.||.|||||||||||.||.|||||||
Sbjct  660  TAGCGCCATGTGCAAGGTGGTCCGCTACTTCCAGTACCTCACCCCCGGCGTGCAGATCTACGTGCTGCTCTCCA  733

Query  476  TCTGCATAGACCGGTTCTACACCATCGTCTATCCTCTGAGCTTCAAGGTGTCCAGAGAAAAAGCCAAGAAAATG  549
            |||||||.|||||.|||||.|||||||||||.||.||||||||||||||||||.||||.||.||||||||||||
Sbjct  734  TCTGCATCGACCGCTTCTATACCATCGTCTACCCGCTGAGCTTCAAGGTGTCCCGAGAGAAGGCCAAGAAAATG  807

Query  550  ATTGCGGCATCGTGGATCTTTGATGCAGGCTTTGTGACCCCTGTGCTCTTTTTCTATGGCTCCAACTGGGACAG  623
            |||||.||.||.||||||||.||.||.|.|||.|||||.|||||..||||||||||.|||||.||||||||.||
Sbjct  808  ATTGCAGCCTCCTGGATCTTGGACGCGGCCTTCGTGACGCCTGTCTTCTTTTTCTACGGCTCTAACTGGGATAG  881

Query  624  TCATTGTAACTATTTCCTCCCCTCCTCTTGGGAAGGCACTGCCTACACTGTCATCCACTTCTTGGTGGGCTTTG  697
            |||.||||||||.||||||||..||||.|||||.||.||||||||.||.|||||||||||||||||||||||.|
Sbjct  882  TCACTGTAACTACTTCCTCCCTCCCTCCTGGGAGGGAACTGCCTATACCGTCATCCACTTCTTGGTGGGCTTCG  955

Query  698  TGATTCCATCTGTCCTCATAATTTTATTTTACCAAAAGGTCATAAAATATATTTGGAGAATAGGCACAGATGGC  771
            |||||||.||..||||||||||..|.||||||||.|||||||||||.|||||.||||||||||||||.||.||.
Sbjct  956  TGATTCCCTCCATCCTCATAATCCTGTTTTACCAGAAGGTCATAAAGTATATCTGGAGAATAGGCACGGACGGG  1029

Query  772  CGAACGGTGAGGAGGACAATGAACATTGTCCCTCGGACAAAAGTGAAAACTATCAAGATGTTCCTCATCTTAAA  845
            ||.|||.||||.|||||.||||||||||||||..|||||||.||||||||..|||||||||||||..||||.||
Sbjct 1030  CGGACGCTGAGAAGGACGATGAACATTGTCCCCAGGACAAAGGTGAAAACGGTCAAGATGTTCCTGCTCTTGAA  1103

Query  846  TCTGTTGTTTTTGCTCTCCTGGCTGCCTTTTCATGTAGCTCAGCTATGGCACCCCCATGAACAAGACTATAAGA  919
            .||..||||..||.||||||||||.|||||.|||||.||||||||.|||||.||||||||.||||||||.||||
Sbjct 1104  CCTAGTGTTCCTGTTCTCCTGGCTACCTTTCCATGTGGCTCAGCTCTGGCATCCCCATGAGCAAGACTACAAGA  1177

Query  920  AAAGTTCCCTTGTTTTCACAGCTATCACATGGATATCCTTTAGTTCTTCAGCCTCTAAACCTACTCTGTATTCA  993
            |.||.||||||||.|||||.||..||||.|||.||||.||.||.|||||||||||.|||||.||||||||.||.
Sbjct 1178  AGAGCTCCCTTGTCTTCACGGCAGTCACGTGGGTATCTTTCAGCTCTTCAGCCTCGAAACCCACTCTGTACTCT  1251

Query  994  ATTTATAATGCCAATTTTCGGAGAGGGATGAAAGAGACTTTTTGCATGTCCTCTATGAAATGTTACCGAAGCAA  1067
            ||||||||||||||||||||||||||||||||||||||.||.|||||||||||.||||||||.|||||.|||||
Sbjct 1252  ATTTATAATGCCAATTTTCGGAGAGGGATGAAAGAGACATTCTGCATGTCCTCGATGAAATGCTACCGCAGCAA  1325

Query 1068  TGCCTATACTATCACAACAAGTTCAAGGATGGCCAAAAAAAACTACGTTGGCATTTCAGAAATCCCTTCCATGG  1141
            ||||||.||.|||||.||.||.|||.||||||||||||.||||||.||.||||||||.|||||||||.||.||.
Sbjct 1326  TGCCTACACCATCACGACCAGCTCACGGATGGCCAAAAGAAACTATGTGGGCATTTCGGAAATCCCTCCCGTGA  1399

Query 1142  CCAAAACTATTACCAAAGACTCGATCTATGACTCATTTGACAGAGAAGCCAAGGAAAAAAAGCTTGCTTGGCCC  1215
            .||..||.||.|||||||||||.||||||||||||||||||.|.||.||||.|||.||.|||||.||.||||||
Sbjct 1400  GCAGGACCATAACCAAAGACTCCATCTATGACTCATTTGACCGGGAGGCCAGGGAGAAGAAGCTCGCCTGGCCC  1473

Query 1216  ATTAACTCAAATCCACCAAATACTTTTGTC  1245
            ||.||||||||.||.|||||.|||||||||
Sbjct 1474  ATCAACTCAAACCCTCCAAACACTTTTGTC  1503