Nucleotide Global Alignment

Description

• Query: TRCN0000487698
• Subject: XM_017026989.1
• Aligned Length: 1544
• Identities: 884
• Gaps: 631

Alignment

Query    1  ATGCTGGCCCGGAGGAAGCCGGTGCTGCCGGCGCTCACCATCAACCCTACCATCGCCGAGGGCCCATCCCCTAC  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGCTGGCCCGGAGGAAGCCGGTGCTGCCGGCGCTCACCATCAACCCTACCATCGCCGAGGGCCCATCCCCTAC  74

Query   75  CAGCGAGGGCGCCTCCGAGGCAAACCTGGTGGACCTGCAGAAGAAGCTGGAGGAGCTGGAACTTGACGAGCAGC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CAGCGAGGGCGCCTCCGAGGCAAACCTGGTGGACCTGCAGAAGAAGCTGGAGGAGCTGGAACTTGACGAGCAGC  148

Query  149  AGAAGAAGCGGCTGGAAGCCTTTCTCACCCAGAAAGCCAAGGTCGGCGAACTCAAAGACGATGACTTCGAAAGG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AGAAGAAGCGGCTGGAAGCCTTTCTCACCCAGAAAGCCAAGGTCGGCGAACTCAAAGACGATGACTTCGAAAGG  222

Query  223  ATCTCAGAGCTGGGCGCGGGCAACGGCGGGGTGGTCACCAAAGTCCAGCACAGACCCTCGGGCCTCATCATGGC  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  ATCTCAGAGCTGGGCGCGGGCAACGGCGGGGTGGTCACCAAAGTCCAGCACAGACCCTCGGGCCTCATCATGGC  296

Query  297  CAGGAAGCTGATCCACCTTGAGATCAAGCCGGCCATCCGGAACCAGATCATCCGCGAGCTGCAGGTCCTGCACG  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CAGGAAGCTGATCCACCTTGAGATCAAGCCGGCCATCCGGAACCAGATCATCCGCGAGCTGCAGGTCCTGCACG  370

Query  371  AATGCAACTCGCCGTACATCGTGGGCTTCTACGGGGCCTTCTACAGTGACGGGGAGATCAGCATTTGCATGGAA  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AATGCAACTCGCCGTACATCGTGGGCTTCTACGGGGCCTTCTACAGTGACGGGGAGATCAGCATTTGCATGGAA  444

Query  445  CACATGGACGGCGGCTCCCTGGACCAGGTGCTGAAAGAGGCCAAGAGGATTCCCGAGGAGATCCTGGGGAAAGT  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CACATGGACGGCGGCTCCCTGGACCAGGTGCTGAAAGAGGCCAAGAGGATTCCCGAGGAGATCCTGGGGAAAGT  518

Query  519  CAGCATCGCGGTTCTCCGGGGCTTGGCGTACCTCCGAGAGAAGCACCAGATCATGCACCGAGATGTGAAGCCCT  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CAGCATCGCGGTTCTCCGGGGCTTGGCGTACCTCCGAGAGAAGCACCAGATCATGCACCGAGATGTGAAGCCCT  592

Query  593  CCAACATCCTCGTGAACTCTAGAGGGGAGATCAAGCTGTGTGACTTCGGGGTGAGCGGCCAGCTCATAGACTCC  666
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct  593  CCAACATCCTCGTGAACTCTAGAGGGGAGATCAAGCTGTGTGACTTCGGGGTGAGCGGCCAGCTCATCGACTCC  666

Query  667  ATGGCCAACTCCTTCGTGGGCACGCGCTCCTACATGGCT-----------------------------------  705
            |||||||||||||||||||||||||||||||||||||||                                   
Sbjct  667  ATGGCCAACTCCTTCGTGGGCACGCGCTCCTACATGGCTCCGGAGCGGTTGCAGGGCACACATTACTCGGTGCA  740

Query  706  --------------------------------------------------------------------------  705
                                                                                      
Sbjct  741  GTCGGACATCTGGAGCATGGGCCTGTCCCTGGTGGAGCTGGCCGTCGGAAGGTACCCCATCCCCCCGCCCGACG  814

Query  706  --------------------------------------------------------------------------  705
                                                                                      
Sbjct  815  CCAAAGAGCTGGAGGCCATCTTTGGCCGGCCCGTGGTCGACGGGGAAGAAGGAGAGCCTCACAGCATCTCGCCT  888

Query  706  --------------------------------------------------------------------------  705
                                                                                      
Sbjct  889  CGGCCGAGGCCCCCCGGGCGCCCCGTCAGCGGTCACGGGATGGATAGCCGGCCTGCCATGGCCATCTTTGAACT  962

Query  706  ----------------------CCACCTCCTAAGCTGCCCAACGGTGTGTTCACCCCCGACTTCCAGGAGTTTG  757
                                  ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CCTGGACTATATTGTGAACGAGCCACCTCCTAAGCTGCCCAACGGTGTGTTCACCCCCGACTTCCAGGAGTTTG  1036

Query  758  TCAATAAATG---------------------------------CCT--CATCAAGAACCCAGC---------GG  787
            ||||||||||                                 |||  |..||||.|||||||         ||
Sbjct 1037  TCAATAAATGGTTCTGGGAGGGTCGCCAGCCCCACTCCATTCTCCTGCCCCCAAGCACCCAGCAGCACCTGTGG  1110

Query  788  AGCGGGC------GGACCTGAAGATGCTCACAAACC------------------ACACC------TTCATCAAG  831
            .|.||||      || |.||    ||| |.||.|||                  |||||      ..|| ||.|
Sbjct 1111  CGTGGGCTTCACAGG-CATG----TGC-CGCAGACCACGGGGAAGGAGCTGCGGACACCCCGCTGCCCA-CAGG  1177

Query  832  --CGGTCC--------GAG-----------GTGGAA---------------------GAAGT------------  851
              ||||||        |||           ||||||                     |.|||            
Sbjct 1178  GCCGGTCCATGTGTGTGAGCTCGGGACGCCGTGGAACGGCACCGCACTCCTGGTGCCGGAGTTGCCCCGGGCCC  1251

Query  852  ----------------GGATTTTGCC---GGC---TGGTTGTGTAAAAC-----CCTGCGG-------------  885
                            .|||.|||||   |||   .||||.|.|.|.||     .|||.||             
Sbjct 1252  TTGGCGTGCGCTCCGGCGATGTTGCCCCGGGCCTGGGGTTTTATTAGACAGTTAGCTGGGGTTGCGTCCAGGCT  1325

Query  886  -CTGA---ACCAGCCCGG----CACACC------------CACGCGCACCGCCGTG------------------  921
             ||||   |||||.|.||    |.||||            |||.|.| ||||.|.|                  
Sbjct 1326  TCTGACCCACCAGGCGGGGTTTCCCACCCTCTTTCCCTCTCACCCTC-CCGCTGGGGGGTGTCCTGCCCCTGGC  1398

Query  922  --------------------------------------------------------------------------  921
                                                                                      
Sbjct 1399  ACCAAAGTGCAGAGGTGGATCCCTCGTCCTCTGCCAGGAGGCAGAACAGAGCAGCCACTCTGTGCCACTCTCTC  1472

Query  922  ----------------------------------------------------------------  921
                                                                            
Sbjct 1473  TGGTCGGAGAGATCCAGGCCCCCTCCGACCACGGCCCACACGCGGGTGCCCCGGGGCCACCAGC  1536