Nucleotide Global Alignment
Description
- Query:
- TRCN0000487781
- Subject:
- XR_243518.4
- Aligned Length:
- 3989
- Identities:
- 1215
- Gaps:
- 2769
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACAGCGCGATGGCGGCGGCTCCTTTAGGCAGCTGAAAGGGGATTTAGGCCCGGAAGATCCGAGTCCATCCGCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGGGGAGAGGGCAAGCGGGACCGGTAGGGGCCGGAGCAGCGGCGGCGGCGCTCGGACTGTCCCATCCGCCCCGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATTGAGGCGCTGGGAGCGGCGGGGCGACAGGAAAGCGATGGTGAAAGCGGGGCCGTGAGGGGGGCGGAGCCGGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGCCGGACCCGCAGTAGCGGCAGCAGCGGCGCCGCCTCCCAGAGTTCAGACCCAGGAAGCGGCCGGGAGGGCAG 296
Query 1 -----------------------ATGGAGCTGAGAGTCGGGAACAGGTACCGGCTGGGCCGGAAGATCGGCAGC 51
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GAGCGAATCGGGCCGCCGCCGCCATGGAGCTGAGAGTCGGGAACAGGTACCGGCTGGGCCGGAAGATCGGCAGC 370
Query 52 GGCTCCTTCGGAGACATCTATCTCGGTACGGACATTGCTGCAGGAGAAGAGGTTGCCATCAAGCTTGAATGTGT 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GGCTCCTTCGGAGACATCTATCTCGGTACGGACATTGCTGCAGGAGAAGAGGTTGCCATCAAGCTTGAATGTGT 444
Query 126 CAAAACCAAACACCCTCAGCTCCACATTGAGAGCAAAATCTACAAGATGATGCAGGGAGGAGTGGGCATCCCCA 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CAAAACCAAACACCCTCAGCTCCACATTGAGAGCAAAATCTACAAGATGATGCAGGGAGGAGTGGGCATCCCCA 518
Query 200 CCATCAGATGGTGCGGGGCAGAGGGGGACTACAACGTCATGGTGATGGAGCTGCTGGGGCCAAGCCTGGAGGAC 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CCATCAGATGGTGCGGGGCAGAGGGGGACTACAACGTCATGGTGATGGAGCTGCTGGGGCCAAGCCTGGAGGAC 592
Query 274 CTCTTCAACTTCTGCTCCAGGAAATTCAGCCTCAAAACCGTCCTGCTGCTTGCTGACCAAATGATCAGTCGCAT 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CTCTTCAACTTCTGCTCCAGGAAATTCAGCCTCAAAACCGTCCTGCTGCTTGCTGACCAAATGATCAGTCGCAT 666
Query 348 CGAATACATTCATTCAAAGAACTTCATCCACCGGGATGTGAAGCCAGACAACTTCCTCATGGGCCTGGGGAAGA 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CGAATACATTCATTCAAAGAACTTCATCCACCGGGATGTGAAGCCAGACAACTTCCTCATGGGCCTGGGGAAGA 740
Query 422 AGGGCAACCTGGTGTACATCATCGACTTCGGGCTGGCCAAGAAGTACCGGGATGCACGCACCCACCAGCACATC 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AGGGCAACCTGGTGTACATCATCGACTTCGGGCTGGCCAAGAAGTACCGGGATGCACGCACCCACCAGCACATC 814
Query 496 CCCTATCGTGAGAACAAGAACCTCACGGGGACGGCGCGGTACGCCTCCATCAACACGCACCTTGGAATTGAACA 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CCCTATCGTGAGAACAAGAACCTCACGGGGACGGCGCGGTACGCCTCCATCAACACGCACCTTGGAATTGAACA 888
Query 570 ATCCCGAAGAGATGACTTGGAGTCTCTGGGCTACGTGCTAATGTACTTCAACCTGGGCTCTCTCCCCTGGCAGG 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ATCCCGAAGAGATGACTTGGAGTCTCTGGGCTACGTGCTAATGTACTTCAACCTGGGCTCTCTCCCCTGGCAGG 962
Query 644 GGCTGAAGGCTGCCACCAAGAGACAGAAATACGAAAGGATTAGCGAGAAGAAAATGTCCACCCCCATCGAAGTG 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GGCTGAAGGCTGCCACCAAGAGACAGAAATACGAAAGGATTAGCGAGAAGAAAATGTCCACCCCCATCGAAGTG 1036
Query 718 TTGTGTAAAGGCTACCCTTCCGAATTTGCCACATACCTGAATTTCTGCCGTTCCTTGCGTTTTGACGACAAGCC 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TTGTGTAAAGGCTACCCTTCCGAATTTGCCACATACCTGAATTTCTGCCGTTCCTTGCGTTTTGACGACAAGCC 1110
Query 792 TGACTACTCGTACCTGCGGCAGCTTTTCCGGAATCTGTTCCATCGCCAGGGCTTCTCCTATGACTACGTGTTCG 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TGACTACTCGTACCTGCGGCAGCTTTTCCGGAATCTGTTCCATCGCCAGGGCTTCTCCTATGACTACGTGTTCG 1184
Query 866 ACTGGAACATGCTCAAATTTGGTGCCAGCCGGGCCGCCGATGACGCCGAGCGGGAGCGCAGGGACCGAGAGGAG 939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 ACTGGAACATGCTCAAATTTGGTGCCAGCCGGGCCGCCGATGACGCCGAGCGGGAGCGCAGGGACCGAGAGGAG 1258
Query 940 CGGCTGAGACACTCGCGGAACCCGGCTACCCGCGGCCTCCCTTCCACAGCCTCCGGCCGCCTGCGGGGGACGCA 1013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CGGCTGAGACACTCGCGGAACCCGGCTACCCGCGGCCTCCCTTCCACAGCCTCCGGCCGCCTGCGGGGGACGCA 1332
Query 1014 GGAAGTGGCTCCCCCCACACCCCTCACCCCTACCTCACACACGGCTAACACCTCCCCCCGGCCCGTCTCCGGCA 1087
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GGAAGTGGCTCCCCCCACACCCCTCACCCCTACCTCACACACGGCTAACACCTCCCCCCGGCCCGTCTCCGGCA 1406
Query 1088 TGGAGAGAGAGCGGAAAGTGAGTATGCGGCTGCACCGCGGGGCCCCCGTCAACATCTCCTCGTCCGACCTCACA 1161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TGGAGAGAGAGCGGAAAGTGAGTATGCGGCTGCACCGCGGGGCCCCCGTCAACATCTCCTCGTCCGACCTCACA 1480
Query 1162 GGCCGACAAGATACCTCTCGCATGTCCACCTCACA-GAATAGCATTCCT----------TTCGAACACCACGGC 1224
||||||||||||||||||||||||||||||||||| ||.||| .||| .|||.|| ||||
Sbjct 1481 GGCCGACAAGATACCTCTCGCATGTCCACCTCACAGGACTAG---GCCTGAGCCCTGTCGTCGTAC----CGGC 1547
Query 1225 AAG----------------------------------------------------------------------- 1227
.||
Sbjct 1548 GAGGATGTGCGTCTCCCCTGCCTTCAGGCTGTGCCCTGAGACCCAGTTGTGGGGCTGCCCAGCACCTGCCATCC 1621
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 1622 TGCTGGGATCAGGTTTTCTTAGTGCTTGAGAAGACTCAGGAGGGCCTGTCCCATGCCATTGTTGGCCTTAAGAG 1695
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 1696 CAAGTGATTCCAGAAGAGGAGTGGGCACCACTCTCATCCAGAGGCCCGTCCTGAGAGAATAGCATTCCTTTCGA 1769
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 1770 ACACCACGGCAAGTAGCTGCTCGTCTCCCATCGGAAGGCAGCACTGGATTCCTGGTCGGGTGGCTTCCAGTGGT 1843
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 1844 CTTCAGTCTGTCGTGCACCGATGAGAACTCTCCTTATTGCTGTGAAGGGCAGACAATGCATGGCTGATCTACTC 1917
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 1918 TGTTACCAATGGCTTTACTAGTGACACGTCCCCCGGTCTAGGATCGAAATGTTAACACCGGGAGCTCTCCAGGC 1991
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 1992 CACTCACCCAGCGACGCTCGTGGGGGAAACATACTAAACGGACAGACTCCAAGAGCTGCCACCGCTGGGGCTGC 2065
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 2066 ACTGCGGCCCCCCACGTGAACTCGGTTGTAACGGGGCTGGGAAGAAAAGCAGAGAGAGAATTGCAGAGAATCAG 2139
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 2140 ACTCCTTTTCCAGGGCCTCAGCTCCCTCCAGTGGTGGCCGCCCTGTACTCCCTGACGATTCCACTGTAACTACC 2213
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 2214 AATCTTCTACTTGGTTAAGACAGTTTTGTATCATTTTGCTAAAAATTATTGGCTTAAATCTGTGTAAAGAAAAT 2287
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 2288 CTGTCTTTTTATTGTTTCTTGTCTGTTTTTGCAGTCTTACAAAAAAAATGTTGACTAAGGAATTCTGAGACAGG 2361
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 2362 CTGGCTTGGAGTTAGTGTATGAGGTGGAGTCGGGCAGGGAGAAGGTGCAGGTGGATCTCAAGGGTGTGTGCTGT 2435
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 2436 GTTTGTTTTGCAGTGTTTTATTGTCCGCTTTGGAGAGGAGATTTCTCATCAAAAGTCCGTGGTGTGTGTGTGTG 2509
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 2510 CCCGTGTGTGGTGGGACCTCTTCAACCTGATTTTGGCGTCTCACCCTCCCTCCTCCCGTAATTGACATGCCTGC 2583
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 2584 TGTCAGGAACTCTTGAGGCCCTCGGAGAGCAGTTAGGGACCGCAGGCTGCCGCGGGGCAGGGGTGCAGTGGGTG 2657
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 2658 TTACCAGGCAAAGCACTGCGCGCTTCTTCCCCAGGAGGTGGGCAGGCAGCTGAGAGCTTGGAAGCAGAGGCTTT 2731
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 2732 GAGACCCTAGCAGGACAATTGGGAGTCCCAGGATTCAAGGTGGAAGATGCGTTTCTGGTCCCTTGGGAGAGGAC 2805
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 2806 TGTGAACCGAGAGGTGGTTACTGTAGTGTTTGTTGCCTTGCTGCCTTTGCACTCAGTCCATTTTCTCAGCACTC 2879
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 2880 AATGCTCCTGTGCGGATTGGCACTCCGTCTGTATGAATGCCTGTGCTTAAAACCAGGAGCGGGGCTGTCCTTGC 2953
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 2954 CACGTGCCAAGACTAGCTCAGAAAAGCCGGCAGGCCAGAAGGACCCACCCTGAGGTGCCAAGGAGCAGGTGACT 3027
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 3028 CTCCCAACCGGACCCAGAACCTTCACGGCCAGAAAGTAGAGTCTGCGCTGTGACCTTCTGTTGGGCGCGTGTCT 3101
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 3102 GTTGGTCAGAAGTGAAGCAGCGTGCGTGGGGCCGAGTCCCACCAGAAGGCAGGTGGCCTCCGTGAGCTGGTGCT 3175
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 3176 GCCCCAGGCTCCATGCTGCTGTGCCCTGAGGTTCCCAGGATGCCTTCTCGCCTCTCACTCCGCAGCACTTGGGC 3249
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 3250 GGTAGCCAGTGGCCATGTGCTCCCAACCCCAATGCGCAGGGCAGTCTGTGTTCGTGGGCACTTCGGCTGGACCC 3323
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 3324 CATCACGATGGACGATGTTCCCTTTGGACTCTAGGGCTTCGAAGGTGTGCACCTTGGTTCTCCCTTCTCCTCCC 3397
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 3398 CAGAGTTCCCCGGATGCCATAACTGGCTGGCGTCCCAGAACACAGTTGTTCACCCCCCCACCAGCTGGCTGGCC 3471
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 3472 GTCTGCCTGAGCCCATGGATGCTTTCTCAATCCTAGGCTGGTTACTGTGTAAGCGTTTTGGAGTACGGGGCCTT 3545
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 3546 GAGCGGGTGGGAGCTGTGTGTTGAAGTACAGAGGGAGGTTGGGGTGGGTCAGAGCCGAGTTAAGAGATTTTCTT 3619
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 3620 TGTTGCTGGACCCCTTCTTGAAGGTAGACGTCCCCCACCCGGAGAGACGTCGCGCTGTGGCCTGAAGTGGCGCA 3693
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 3694 AGCTTGCTTTGTAAATATCTGTGGTCCCGATGTAGTGCCCAGAACGTTTGTGCGAGGCAGCTCTGCGCCCGGGT 3767
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 3768 TCCAGCCCGAGCCTCGCCGGGTCGCGTCTTCGGAGTGCTTGTGACAGTCCTTGCCCAGTATCTAGTCCCCGTCG 3841
Query 1228 -------------------------------------------------------------------------- 1227
Sbjct 3842 CCCCGTGCAGGAGACGTAGGTAGGACGTCGTGTCAGCTGTGCACTGACGGCCAGTCTCCGAGCTGTGCGTTTGT 3915
Query 1228 ------------------------------------------------------------------- 1227
Sbjct 3916 ATCGCCACTGTATTTGTGTACTTTAACAATCGTGTAAATAATAAATTCATAATGACTTCTACCTTTC 3982
