Nucleotide Global Alignment
Description
- Query:
- TRCN0000487794
- Subject:
- XR_001746370.2
- Aligned Length:
- 5060
- Identities:
- 1836
- Gaps:
- 3224
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAGGAAGTTGCCCAAAATGAGGAAGAGCCGCGGGCCCGGCGGCTGAGGCCACCCCGGCGGCGGCTGGAGAGCGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGAGGAGCGGGTGGCCCCGCGCTGCGCCCGCCCTCGCCTCACCTGGCGCAGGTGGACACCTGCGCAGGTGTGTG 148
Query 1 ------------------ATGGCCAGCAGCGGCATGGCTGACAGCGCCAACCACCTGCCCTTCTTTTTCGGCAA 56
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CCCTCCGGCCCCTGAAGCATGGCCAGCAGCGGCATGGCTGACAGCGCCAACCACCTGCCCTTCTTTTTCGGCAA 222
Query 57 CATCACCCGGGAGGAGGCAGAAGATTACCTGGTCCAGGGGGGCATGAGTGATGGGCTTTATTTGCTGCGCCAGA 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CATCACCCGGGAGGAGGCAGAAGATTACCTGGTCCAGGGGGGCATGAGTGATGGGCTTTATTTGCTGCGCCAGA 296
Query 131 GCCGCAACTACCTGGGTGGCTTCGCCCTGTCCGTGGCCCACGGGAGGAAGGCACACCACTACACCATCGAGCGG 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GCCGCAACTACCTGGGTGGCTTCGCCCTGTCCGTGGCCCACGGGAGGAAGGCACACCACTACACCATCGAGCGG 370
Query 205 GAGCTGAATGGCACCTACGCCATCGCCGGTGGCAGGACCCATGCCAGCCCCGCCGACCTCTGCCACTACCACTC 278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GAGCTGAATGGCACCTACGCCATCGCCGGTGGCAGGACCCATGCCAGCCCCGCCGACCTCTGCCACTACCACTC 444
Query 279 CCAGGAGTCTGATGGCCTGGTCTGCCTCCTCAAGAAGCCCTTCAACCGGCCCCAAGGGGTGCAGCCCAAGACTG 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CCAGGAGTCTGATGGCCTGGTCTGCCTCCTCAAGAAGCCCTTCAACCGGCCCCAAGGGGTGCAGCCCAAGACTG 518
Query 353 GGCCCTTTGAGGATTTGAAGGAAAACCTCATCAGGGAATATGTGAAGCAGACATGGAACCTGCAGGGTCAGGCT 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GGCCCTTTGAGGATTTGAAGGAAAACCTCATCAGGGAATATGTGAAGCAGACATGGAACCTGCAGGGTCAGGCT 592
Query 427 CTGGAGCAGGCCATCATCAGTCAGAAGCCTCAGCTGGAGAAGCTGATCGCTACCACAGCCCATGAAAAAATGCC 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CTGGAGCAGGCCATCATCAGTCAGAAGCCTCAGCTGGAGAAGCTGATCGCTACCACAGCCCATGAAAAAATGCC 666
Query 501 TTGGTTCCATGGAAAAATCTCTCGGGAAGAATCTGAGCAAATTGTCCTGATAGGATCAAAGACAAATGGAAAGT 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TTGGTTCCATGGAAAAATCTCTCGGGAAGAATCTGAGCAAATTGTCCTGATAGGATCAAAGACAAATGGAAAGT 740
Query 575 TCCTGATCCGAGCCAGAGACAACAACGGCTCCTACGCCCTGTGCCTGCTGCACGAAGGGAAGGTGCTGCACTAT 648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TCCTGATCCGAGCCAGAGACAACAACGGCTCCTACGCCCTGTGCCTGCTGCACGAAGGGAAGGTGCTGCACTAT 814
Query 649 CGCATCGACAAAGACAAGACAGGGAAGCTCTCCATCCCCGAGGGAAAGAAGTTCGACACGCTCTGGCAGCTAGT 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CGCATCGACAAAGACAAGACAGGGAAGCTCTCCATCCCCGAGGGAAAGAAGTTCGACACGCTCTGGCAGCTAGT 888
Query 723 CGAGCATTATTCTTATAAAGCAGATGGTTTGTTAAGAGTTCTTACTGTCCCATGTCAAAAAATCGGCACACAGG 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CGAGCATTATTCTTATAAAGCAGATGGTTTGTTAAGAGTTCTTACTGTCCCATGTCAAAAAATCGGCACACAGG 962
Query 797 GAAATGTTAATTTTGGAGGCCGTCCACAACTTCCAGGTTCCCATCCTGC------------------------- 845
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GAAATGTTAATTTTGGAGGCCGTCCACAACTTCCAGGTTCCCATCCTGCGACTTGGTCAGCGGGTGGAATAATC 1036
Query 846 -------------------------------------------------------------------------- 845
Sbjct 1037 TCAAGAATCAAATCATACTCCTTCCCAAAGCCTGGCCACAGAAAGGTGCTAAAGCAACCCCTGCTTGCTGTCCA 1110
Query 846 -------GTCCTCCCCTGCCCAAGGGAACCGGCAAGAGAGTACTGTGTCATTCAATCCGTATGAGCCAGAACTT 912
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ACTAAGTGTCCTCCCCTGCCCAAGGGAACCGGCAAGAGAGTACTGTGTCATTCAATCCGTATGAGCCAGAACTT 1184
Query 913 GCACCCTGGGCTGCAGACAAAGGCCCCCAGAGAGAAGCCCTACCCATGGACACAGAGGTGTACGAGAGCCCCTA 986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GCACCCTGGGCTGCAGACAAAGGCCCCCAGAGAGAAGCCCTACCCATGGACACAGAGGTGTACGAGAGCCCCTA 1258
Query 987 CGCGGACCCCGAGGAGATCAGGCCCAAGGAGGTTTACCTGGACCGAAAGCTGCTGACGCTGGAAGACAAAGAAC 1060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CGCGGACCCCGAGGAGATCAGGCCCAAGGAGGTTTACCTGGACCGAAAGCTGCTGACGCTGGAAGACAAAGAAC 1332
Query 1061 TGGGCTCTGGTAATTTTGGAACTGTGAAAAAGGGCTACTACCAAATGAAAAAAGTTGTGAAAACCGTGGCTGTG 1134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TGGGCTCTGGTAATTTTGGAACTGTGAAAAAGGGCTACTACCAAATGAAAAAAGTTGTGAAAACCGTGGCTGTG 1406
Query 1135 AAAATACTGAAAAACGAGGCCAATGACCCCGCTCTTAAAGATGAGTTATTAGCAGAAGCAAATGTCATGCAGCA 1208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 AAAATACTGAAAAACGAGGCCAATGACCCCGCTCTTAAAGATGAGTTATTAGCAGAAGCAAATGTCATGCAGCA 1480
Query 1209 GCTGGACAACCCGTACATCGTGCGGATGATCGGGATATGCGAGGCCGAGTCCTGGATGCTGGTTATGGAGATGG 1282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 GCTGGACAACCCGTACATCGTGCGGATGATCGGGATATGCGAGGCCGAGTCCTGGATGCTGGTTATGGAGATGG 1554
Query 1283 CAGAACTTGGTCCCCTCAATAAGTATTTGCAGCAGAACAGACATGTCAAGGATAAGAACATCATAGAACTGGTT 1356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CAGAACTTGGTCCCCTCAATAAGTATTTGCAGCAGAACAGACATGTCAAGGATAAGAACATCATAGAACTGGTT 1628
Query 1357 CATCAGGTTTCCATGGGCATGAAGTACTTGGAGGAGAGCAATTTTGTGCACAGAGATCTGGCTGCAAGAAATGT 1430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 CATCAGGTTTCCATGGGCATGAAGTACTTGGAGGAGAGCAATTTTGTGCACAGAGATCTGGCTGCAAGAAATGT 1702
Query 1431 GTTGCTAGTTACCCAACATTACGCCAAGATCAGTGATTTCGGACTTTCCAAAGCACTGCGTGCTGATGAAAACT 1504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 GTTGCTAGTTACCCAACATTACGCCAAGATCAGTGATTTCGGACTTTCCAAAGCACTGCGTGCTGATGAAAACT 1776
Query 1505 ACTACAAGGCCCAGACCCATGGAAAGTGGCCTGTCAAGTGGTACGCTCCGGAATGCATCAACTACTACAAGTTC 1578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 ACTACAAGGCCCAGACCCATGGAAAGTGGCCTGTCAAGTGGTACGCTCCGGAATGCATCAACTACTACAAGTTC 1850
Query 1579 TCCAGCAAAAGCGATGTCTGGAGCTTTGGAGTGTTGATGTGGGAAGCATTCTCCTATGGGCAGAAGCCATATCG 1652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 TCCAGCAAAAGCGATGTCTGGAGCTTTGGAGTGTTGATGTGGGAAGCATTCTCCTATGGGCAGAAGCCATATCG 1924
Query 1653 AGGGATGAAAGGAAGTGAAGTCACCGCTATGTTAGAGAAAGGAGAGCGGATGGGGTGCCCTGCAGGGTGTCCAA 1726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 AGGGATGAAAGGAAGTGAAGTCACCGCTATGTTAGAGAAAGGAGAGCGGATGGGGTGCCCTGCAGGGTGTCCAA 1998
Query 1727 GAGAGATGTACGATCTCATGAATCTGTGCTGGACATACGATGTGGAAAACAGGCCCGGATTCGCAGCAGTGGAA 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 GAGAGATGTACGATCTCATGAATCTGTGCTGGACATACGATGTGGAAAACAGGCCCGGATTCGCAGCAGTGGAA 2072
Query 1801 CTGCGGCTGCGCAATTACTACTATGACGTGGTGAAC-------------------------------------- 1836
||||||||||||||||||||||||||||||||||||
Sbjct 2073 CTGCGGCTGCGCAATTACTACTATGACGTGGTGAACTAACCGCTCCCGCACCTGTCGGTGGCTGCCTTTGATCA 2146
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 2147 CAGGAGCAATCACAGGAAAATGTATCCAGAGGAATTGATTGTCAGCCACCTCCCTCTGCCAGTCGGGAGAGCCA 2220
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 2221 GGCTTGGATGGAACATGCCCACAACTTGTCACCCAAAGCCTGTCCCAGGACTCACCCTCCACAAAGCAAAGGCA 2294
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 2295 GTCCCGGGAGAAAAGACGGATGGCAGGATCCAAGGGGCTAGCTGGATTTGTTTGTTTTCTTGTCTGTGTGATTT 2368
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 2369 TCATACAGGTTATTTTTACGATCTGTTTCCAAATCCCTTTCATGTCTTTCCACTTCTCTGGGTCCCGGGGTGCA 2442
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 2443 TTTGTTACTCATCGGGCCCAGGGACATTGCAGAGTGGCCTAGAGCACTCTCACCCCAAGCGGCCTTTTCCAAAT 2516
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 2517 GCCCAAGGATGCCTTAGCATGTGACTCCTGAAGGGAAGGCAAAGGCAGAGGAATTTGGCTGCTTCTACGGCCAT 2590
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 2591 GAGACTGATCCCTGGCCACTGAAAAGCTTTCCTGACAATAAAAATGTTTTGAGGCTTTAAAAAGAAAATCAAGT 2664
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 2665 TTGACCAGTGCAGTTTCTAAGCATGTAGCCAGTTAAGGAAAGAAAGAAAGAAAAAAAAAAAAGGCCTGGATACT 2738
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 2739 GCTTTTGCTGTCTCTGTTATGAGATGGAAGACTTACATGTTTGTGATAAAAGGGGACCATGAGAATGAATTGGC 2812
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 2813 TTGGCTTACTTTCCCCCTGAAATCCTCTCTCCTGCAGACTGTCTTGAAGACCTGGTGACTGGTAAATAAAGCCC 2886
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 2887 TGCATGGAGGCTGCACAGCAGGGGCAAGAGGCCCATCCCCCAGCATCTCACTGAGGACAGCTTCAGGCTGCCTT 2960
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 2961 CCTCTGAACGTGGTCCACACCTTCCTCTCCTCCACAGAGAGGGTGCCGCCAGAATCCCCTGTCGCTTTCTGTGT 3034
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 3035 CTGCAATGGGGGGCAGCACAGGGATCAAAGCCATCTAAAGAGTTTCCAAAGAAAGTATTAATTCAGAACAAGCC 3108
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 3109 AAAGACCCTGAGCCTCACCACAAACAGGCCTTTTGGAGTGTGAATTTGAGTTGAAGATACAAGATCGGAGAATG 3182
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 3183 ATTTTCTGGTCTTAACTAATCCTCATCTTCATGTTTGATCTTTAAGAAGTCATCACCCATTGATTTCAGTTTTG 3256
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 3257 CTGTACCTCTTGAAAGTTAAAGAGACATCTCAGCACTTTAGGAGGCCGAGGCGGGTGGATCACTTGAGGTAAGG 3330
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 3331 AGTTTGAGACTAGCCTGGCCAATATGGTAAAACCCCATCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTG 3404
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 3405 GCATGTGTCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAAACGGAGGTCGC 3478
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 3479 AGTGAGCCAAGATCATGCCACTGCACTCCAGCTTGGGCATCACAGCGAGACTCTGTCAAAACAAACAAACAAAA 3552
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 3553 AAACAACTTAAAGAGGTAATTTAGCCATCATTCTTATGCCAGCAGATATAAATAAACTTGGACCCATCTGGTCT 3626
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 3627 TCAGCTAAACCTGAGACATTTTAAAGTGCATGGACAGCCATGGACAGCAGGCCCTCCTCTAACAGGGGATGCAA 3700
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 3701 GGCATGGAGAAAGACAATCAGTACCCAAGCTCAGCCACAGAAGACAGGAGTCACTCATATAACTTGTGTTTAGA 3774
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 3775 AGTTTTTGGTAGCCACGCACACTTTCTGAAATCACACTATCTGGTGGTTTAATCATATTTTTAAAGACAGAATC 3848
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 3849 CCTGAGTGCTGAGCAGATTCTCAAAACACATTTAGAATCCCTGAAATTAGAAAGATCAATGACAAAATATCTGT 3922
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 3923 CAGCCAGGCCACAAACAGGTGTAAAATTATGAAAGGAGTGGTTGGATGTGCCAAGTTTGGTAAAGTGGTGACTG 3996
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 3997 CATCTGAGAAAGAGGCTGTGAGGCTGAACTCTTGGTGGCTTCCTTCTGTAACTTCCAGAGGGAGTCTTCAACAC 4070
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 4071 AGGCCCCGTGCTCGTAGGAATACGGTAGCACCTATGTAGGAAGTGCGTGGAGTTTTCTGTCTTCTTTCTGTGTG 4144
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 4145 ATTTTTGGCCTTTTTATCAGCACTTCTCCCCTCCCAGGAGCCTGGGGATGCCAAACATCCAGAATGTGATGGGA 4218
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 4219 CAAGATGGGGGCAGGGGCCTCACCTCCCTGCAGAGGTCCGGCCAGGTCTCCTTGTCCCTGGACAATCTCCTGAG 4292
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 4293 CCTCTCTGCTTGGTGGAGCAGGCACCTGTGTGCAGAATTCCCACTGTGGCCAGCACGAGGAAGTCTTTTCTAGT 4366
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 4367 GAAAATGTGTCTTGTGGTCAGGAATAATTATCCTTTCCCCTGTAGCCACCAAGGAGGGCAAATAGAGAAAGGTA 4440
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 4441 ACCTAATTGAAGGATTGGTCATGTGAAAAGGGCTACATTTGGGAAGCTGGGAAAGGCCTCCAGGCTTCTAGAGC 4514
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 4515 AGCTAGCTTGGGCTGGATTCTCATACCCAGGCTGCCCCTTGGATTGTTCTACCCAAGCTTTTCCCTGGGGTCTG 4588
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 4589 GGCTCACTCCATAAGGTAAGGTGCCTTTTACCTTATGGTCCTTCTTTAGCAGGTAACAAAGGAGCATCAGGGGC 4662
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 4663 AGGCTGCCCTGGTGGCATCACACTGGCTAGTGAGGCCGTGAATATCTTGTCCCCCAGCAGGGCCGACAGTTTCT 4736
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 4737 ATCACAGAAAACAGTGTGTTCAGTGGTGAAAATCGTTGCATGCATGTTTTCATCTGAGCGTGTCCTTCTCCCAT 4810
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 4811 ACTCCCTATCAGCCAGCCCTGCCTGTAGCTGCTGTATGGTGATTGCACTTGGACATCAGTCCAATGACTGCAAG 4884
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 4885 TCGGCCTGGATTTTCACTTGCAGAGGCTACAGCTGCATTGTCAGGTCTCCCAGCCCTGCAGAGAGCTCCCTCCA 4958
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 4959 CTGGTTAGCAGTGTGTTGTGTTTTCCATTCATTTCAGAAGAGCTACATTGTGTCACTGGACATTTTTAAAAACT 5032
Query 1837 ---------------------------- 1836
Sbjct 5033 GTGATTTTTAATAAAAATTTAAAATTTG 5060
